BLASTX 7.6.2
Query= UN50456 /QuerySize=1200
(1199 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297799522|ref|XP_002867645.1| RNA-binding protein cp31 [Arabi... 444 2e-122
gi|681906|dbj|BAA06520.1| RNA-binding protein cp31 [Arabidopsis ... 382 6e-104
gi|681908|dbj|BAA06521.1| RNA-binding protein cp31 [Arabidopsis ... 380 4e-103
gi|15233980|ref|NP_194208.1| ribonucleoprotein [Arabidopsis thal... 332 9e-089
gi|15294254|gb|AAK95304.1|AF410318_1 AT4g24770/F22K18_30 [Arabid... 332 9e-089
gi|475719|gb|AAA18379.1| RNA-binding protein 2 [Arabidopsis thal... 332 1e-088
gi|510240|emb|CAA43420.1| RNA binding protein [Arabidopsis thali... 332 1e-088
gi|297733663|emb|CBI14910.3| unnamed protein product [Vitis vini... 325 8e-087
gi|225452270|ref|XP_002270233.1| PREDICTED: hypothetical protein... 325 1e-086
gi|255540443|ref|XP_002511286.1| ribonucleoprotein, chloroplast,... 315 1e-083
gi|297795791|ref|XP_002865780.1| hypothetical protein ARALYDRAFT... 315 1e-083
gi|224133740|ref|XP_002321649.1| predicted protein [Populus tric... 314 3e-083
gi|19032260|emb|CAD18921.1| RNA-binding protein precursor [Perse... 310 5e-082
gi|388621|gb|AAA33039.1| RNA-binding protein [Mesembryanthemum c... 309 6e-082
gi|15240641|ref|NP_199836.1| chloroplast RNA-binding protein 31B... 306 7e-081
gi|224119514|ref|XP_002318093.1| predicted protein [Populus tric... 304 2e-080
gi|296087572|emb|CBI34828.3| unnamed protein product [Vitis vini... 304 3e-080
gi|168274276|dbj|BAG09558.1| chloroplast RNA binding protein [Me... 302 1e-079
gi|147838354|emb|CAN61133.1| hypothetical protein VITISV_039575 ... 298 1e-078
gi|225456840|ref|XP_002278832.1| PREDICTED: hypothetical protein... 298 1e-078
>gi|297799522|ref|XP_002867645.1| RNA-binding protein cp31 [Arabidopsis lyrata
subsp. lyrata]
Length = 305
Score = 444 bits (1141), Expect = 2e-122
Identities = 238/299 (79%), Positives = 258/299 (86%), Gaps = 18/299 (6%)
Frame = +1
Query: 109 MASSMVTSSLRPLAMSESSSSTIFSHPSF-STIHSSKTRCSFLAKGT----------NLS 255
MASS+VTSSL+PLAM++SSSSTIFSHPS STI SS+ RCS ++ T S
Sbjct: 1 MASSIVTSSLKPLAMADSSSSTIFSHPSISSTISSSRIRCSNVSLLTGHINLPLSFSRFS 60
Query: 256 RFSLSLKSKTHLKKSPFVTLVAETSDWSGEEDGSSSSVAVEESDPEEATFSEEEGDVSEG 435
RFSLSLKSKTHLKKSPFV+ VA+TSDW+ E+G SVAVEE++ + + EGDVSE
Sbjct: 61 RFSLSLKSKTHLKKSPFVSFVAQTSDWA--EEGGEGSVAVEENE-DSFESQDAEGDVSE- 116
Query: 436 GGGGGDFQEPPEEAKLFVGNLAYDVDSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFV 615
G +F EP EEAKLFVGNLAYDVDSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFV
Sbjct: 117 ---GAEFPEPSEEAKLFVGNLAYDVDSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFV 173
Query: 616 TMSTVEEAETAVEKFNRYDLNGRLLTVNKAAPKGSRPERQPRVYEPAFRVYVGNLPWDVD 795
TMSTVEEAETAVEKFNRYDLNGRLLTVNKAAP+GSRPER PRVYEPAFRVYVGNLPWDVD
Sbjct: 174 TMSTVEEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERAPRVYEPAFRVYVGNLPWDVD 233
Query: 796 SGRLEQVFSEHGKVVEAKVVYDRETGRSRGFGFVTMSNETELNDAVAALDGQNMEGRAI 972
+GRLEQVFSEHGKVVEA+VVYDRETGRSRGFGFVTMSNE ELNDA+AALDGQNMEGRAI
Sbjct: 234 NGRLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSNENELNDAIAALDGQNMEGRAI 292
>gi|681906|dbj|BAA06520.1| RNA-binding protein cp31 [Arabidopsis thaliana]
Length = 314
Score = 382 bits (981), Expect = 6e-104
Identities = 208/301 (69%), Positives = 239/301 (79%), Gaps = 14/301 (4%)
Frame = +1
Query: 88 SSLTILAMASSMVTSSLRPLAMSESSSSTIFSHPSFSTIHSSKTRCSFLAKGTNLSRFSL 267
SSL LAMA S ++ ++S + SS+ S S + + + SR SL
Sbjct: 8 SSLKPLAMADSSSSTIFSHPSISSTISSSRIRSSSVSLLTGR------INLPLSFSRVSL 61
Query: 268 SLKSKTHLKKSPFVTLVAETSDWSGEEDGSSSSVAVEESD-----PEEATFSEEEGDVSE 432
SLK+KTHLKKSPFV+ VA+TSDW+ E+G SVAVEE++ + + E EGDVSE
Sbjct: 62 SLKTKTHLKKSPFVSFVAQTSDWA--EEGGEGSVAVEETENSLESQDVSEGDESEGDVSE 119
Query: 433 GG-GGGGDFQEPPEEAKLFVGNLAYDVDSQALAMLFEQAGTVEIAEVIYNRETDQSRGFG 609
G +F EP EEAKLFVGNLAYDV+SQALAMLFEQAGTVEIAEVIYNRETDQSRGFG
Sbjct: 120 GAVSERAEFPEPSEEAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFG 179
Query: 610 FVTMSTVEEAETAVEKFNRYDLNGRLLTVNKAAPKGSRPERQPRVYEPAFRVYVGNLPWD 789
FVTMS+V+EAETAVEKFNRYDLNGRLLTVNKAAP+GSRPER PRVYEPAFRVYVGNLPWD
Sbjct: 180 FVTMSSVDEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERAPRVYEPAFRVYVGNLPWD 239
Query: 790 VDSGRLEQVFSEHGKVVEAKVVYDRETGRSRGFGFVTMSNETELNDAVAALDGQNMEGRA 969
VD+GRLEQ+FSEHGKVVEA+VVYDRETGRSRGFGFVTMS+ ELN+A++ALDGQN+EGRA
Sbjct: 240 VDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRA 299
Query: 970 I 972
I
Sbjct: 300 I 300
>gi|681908|dbj|BAA06521.1| RNA-binding protein cp31 [Arabidopsis thaliana]
Length = 304
Score = 380 bits (974), Expect = 4e-103
Identities = 208/293 (70%), Positives = 234/293 (79%), Gaps = 14/293 (4%)
Frame = +1
Query: 118 SMVTSSLRPLAMSESSSSTIFSHPSFSTIHSSKTR--CSFLAKGTNLSRFSLSLKSKTHL 291
+M SS + S SSTI S S I SS + + SR SLSLK+KTHL
Sbjct: 4 AMADSSSSTIFSHPSISSTI----SSSRIRSSSVSLLTGRINLPLSFSRVSLSLKTKTHL 59
Query: 292 KKSPFVTLVAETSDWSGEEDGSSSSVAVEESD-----PEEATFSEEEGDVSEGG-GGGGD 453
KKSPFV+ VA+TSDW+ E+G SVAVEE++ + + E EGDVSEG +
Sbjct: 60 KKSPFVSFVAQTSDWA--EEGGEGSVAVEETENSLESQDVSEGDESEGDVSEGAVSERAE 117
Query: 454 FQEPPEEAKLFVGNLAYDVDSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSTVE 633
F EP EEAKLFVGNLAYDV+SQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMS+V+
Sbjct: 118 FPEPSEEAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVD 177
Query: 634 EAETAVEKFNRYDLNGRLLTVNKAAPKGSRPERQPRVYEPAFRVYVGNLPWDVDSGRLEQ 813
EAETAVEKFNRYDLNGRLLTVNKAAP+GSRPER PRVYEPAFRVYVGNLPWDVD+GRLEQ
Sbjct: 178 EAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQ 237
Query: 814 VFSEHGKVVEAKVVYDRETGRSRGFGFVTMSNETELNDAVAALDGQNMEGRAI 972
+FSEHGKVVEA+VVYDRETGRSRGFGFVTMS+ ELN+A++ALDGQN+EGRAI
Sbjct: 238 LFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAI 290
>gi|15233980|ref|NP_194208.1| ribonucleoprotein [Arabidopsis thaliana]
Length = 329
Score = 332 bits (850), Expect = 9e-089
Identities = 199/317 (62%), Positives = 219/317 (69%), Gaps = 31/317 (9%)
Frame = +1
Query: 88 SSLTILAMA-SSMVTSSLRPLAMSESSSSTIFSHP------------SFSTIHSSKTRCS 228
SSL LAMA SS T P S SSS I S SFS + S +
Sbjct: 8 SSLKPLAMADSSSSTIFSHPSISSTISSSRIRSSSVSLLTGRINLPLSFSRVSLSLKTKT 67
Query: 229 FLAKGTNLSRFSLSLKSKTHLKKSPFVTLVAETSDWSGEEDGSSSSVAVEESDPEEATFS 408
L K +S + + S + E S E + S S V E D E S
Sbjct: 68 HLKKSPFVSFVA---------QTSDWAEEGGEGSVAVEETENSLESQDVSEGDESEGDAS 118
Query: 409 --------EEEGDVSEGG-GGGGDFQEPPEEAKLFVGNLAYDVDSQALAMLFEQAGTVEI 561
E EGDVSEG +F EP EEAKLFVGNLAYDV+SQALAMLFEQAGTVEI
Sbjct: 119 EGDVSEGDESEGDVSEGAVSERAEFPEPSEEAKLFVGNLAYDVNSQALAMLFEQAGTVEI 178
Query: 562 AEVIYNRETDQSRGFGFVTMSTVEEAETAVEKFNRYDLNGRLLTVNKAAPKGSRPERQPR 741
AEVIYNRETDQSRGFGFVTMS+V+EAETAVEKFNRYDLNGRLLTVNKAAP+GSRPER PR
Sbjct: 179 AEVIYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERAPR 238
Query: 742 VYEPAFRVYVGNLPWDVDSGRLEQVFSEHGKVVEAKVVYDRETGRSRGFGFVTMSNETEL 921
VYEPAFRVYVGNLPWDVD+GRLEQ+FSEHGKVVEA+VVYDRETGRSRGFGFVTMS+ EL
Sbjct: 239 VYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDEL 298
Query: 922 NDAVAALDGQNMEGRAI 972
N+A++ALDGQN+EGRAI
Sbjct: 299 NEAISALDGQNLEGRAI 315
>gi|15294254|gb|AAK95304.1|AF410318_1 AT4g24770/F22K18_30 [Arabidopsis
thaliana]
Length = 329
Score = 332 bits (850), Expect = 9e-089
Identities = 199/317 (62%), Positives = 219/317 (69%), Gaps = 31/317 (9%)
Frame = +1
Query: 88 SSLTILAMA-SSMVTSSLRPLAMSESSSSTIFSHP------------SFSTIHSSKTRCS 228
SSL LAMA SS T P S SSS I S SFS + S +
Sbjct: 8 SSLKPLAMADSSSSTIFSHPSISSTISSSRIRSSSVSLLTGRINLPLSFSRVSLSLKTKT 67
Query: 229 FLAKGTNLSRFSLSLKSKTHLKKSPFVTLVAETSDWSGEEDGSSSSVAVEESDPEEATFS 408
L K +S + + S + E S E + S S V E D E S
Sbjct: 68 HLKKSPFVSFVA---------QTSDWAEEGGEGSVAVEETENSLESQDVSEGDESEGDAS 118
Query: 409 --------EEEGDVSEGG-GGGGDFQEPPEEAKLFVGNLAYDVDSQALAMLFEQAGTVEI 561
E EGDVSEG +F EP EEAKLFVGNLAYDV+SQALAMLFEQAGTVEI
Sbjct: 119 EGDVSEGDESEGDVSEGAVSERAEFPEPSEEAKLFVGNLAYDVNSQALAMLFEQAGTVEI 178
Query: 562 AEVIYNRETDQSRGFGFVTMSTVEEAETAVEKFNRYDLNGRLLTVNKAAPKGSRPERQPR 741
AEVIYNRETDQSRGFGFVTMS+V+EAETAVEKFNRYDLNGRLLTVNKAAP+GSRPER PR
Sbjct: 179 AEVIYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERAPR 238
Query: 742 VYEPAFRVYVGNLPWDVDSGRLEQVFSEHGKVVEAKVVYDRETGRSRGFGFVTMSNETEL 921
VYEPAFRVYVGNLPWDVD+GRLEQ+FSEHGKVVEA+VVYDRETGRSRGFGFVTMS+ EL
Sbjct: 239 VYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDEL 298
Query: 922 NDAVAALDGQNMEGRAI 972
N+A++ALDGQN+EGRAI
Sbjct: 299 NEAISALDGQNLEGRAI 315
>gi|475719|gb|AAA18379.1| RNA-binding protein 2 [Arabidopsis thaliana]
Length = 315
Score = 332 bits (849), Expect = 1e-088
Identities = 170/211 (80%), Positives = 185/211 (87%), Gaps = 8/211 (3%)
Frame = +1
Query: 343 EEDGSSSSVAVEESDPEEATFSEEEGDVSEGG-GGGGDFQEPPEEAKLFVGNLAYDVDSQ 519
E +G +S V E D E EGDVSEG +F EP EEAKLFVGNLAYDV+SQ
Sbjct: 98 ESEGDASEGDVSEGD-------ESEGDVSEGAVSERAEFPEPSEEAKLFVGNLAYDVNSQ 150
Query: 520 ALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAETAVEKFNRYDLNGRLLTVN 699
ALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMS+V+EAETAVEKFNRYDLNGRLLTVN
Sbjct: 151 ALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVN 210
Query: 700 KAAPKGSRPERQPRVYEPAFRVYVGNLPWDVDSGRLEQVFSEHGKVVEAKVVYDRETGRS 879
KAAP+GSRPER PRVYEPAFRVYVGNLPWDVD+GRLEQ+FSEHGKVVEA+VVYDRETGRS
Sbjct: 211 KAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRS 270
Query: 880 RGFGFVTMSNETELNDAVAALDGQNMEGRAI 972
RGFGFVTMS+ ELN+A++ALDGQN+EGRAI
Sbjct: 271 RGFGFVTMSDVDELNEAISALDGQNLEGRAI 301
>gi|510240|emb|CAA43420.1| RNA binding protein [Arabidopsis thaliana]
Length = 310
Score = 332 bits (849), Expect = 1e-088
Identities = 170/211 (80%), Positives = 185/211 (87%), Gaps = 8/211 (3%)
Frame = +1
Query: 343 EEDGSSSSVAVEESDPEEATFSEEEGDVSEGG-GGGGDFQEPPEEAKLFVGNLAYDVDSQ 519
E +G +S V E D E EGDVSEG +F EP EEAKLFVGNLAYDV+SQ
Sbjct: 93 ESEGDASEGDVSEGD-------ESEGDVSEGAVSERAEFPEPSEEAKLFVGNLAYDVNSQ 145
Query: 520 ALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAETAVEKFNRYDLNGRLLTVN 699
ALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMS+V+EAETAVEKFNRYDLNGRLLTVN
Sbjct: 146 ALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVN 205
Query: 700 KAAPKGSRPERQPRVYEPAFRVYVGNLPWDVDSGRLEQVFSEHGKVVEAKVVYDRETGRS 879
KAAP+GSRPER PRVYEPAFRVYVGNLPWDVD+GRLEQ+FSEHGKVVEA+VVYDRETGRS
Sbjct: 206 KAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRS 265
Query: 880 RGFGFVTMSNETELNDAVAALDGQNMEGRAI 972
RGFGFVTMS+ ELN+A++ALDGQN+EGRAI
Sbjct: 266 RGFGFVTMSDVDELNEAISALDGQNLEGRAI 296
>gi|297733663|emb|CBI14910.3| unnamed protein product [Vitis vinifera]
Length = 306
Score = 325 bits (833), Expect = 8e-087
Identities = 175/293 (59%), Positives = 213/293 (72%), Gaps = 9/293 (3%)
Frame = +1
Query: 115 SSMVTSSLRPLAMSESSSSTIFSHPSFSTIHS-----SKTRCSFLAKGTNLSRFSLSLKS 279
SS L+P ++ S ++ + S T HS L + S FS SL
Sbjct: 2 SSATHHLLKPFSIPNGSPISLPTIFSTKTPHSYLPIPPHKPIKLLLSCSQSSLFSPSLFL 61
Query: 280 KTHLKKSPFVTLVAETSDWSGEEDGSSSSVAVEESDPEEATFSEEEGDVSEG--GGGGGD 453
K+ S VT VA+TSDW+ +E+ ++V +EE E+ T+ EE +G G
Sbjct: 62 KSKTLSSSVVTFVAQTSDWAQQEE--DNTVIIEEEQEEKVTWENEEAISDDGVVDDGEDS 119
Query: 454 FQEPPEEAKLFVGNLAYDVDSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSTVE 633
+ EPPEEAK+FVGNL YDVDS+ LA LFEQAG VEIAEVIYNRETD+SRGFGFV+MSTVE
Sbjct: 120 YSEPPEEAKVFVGNLPYDVDSERLARLFEQAGVVEIAEVIYNRETDRSRGFGFVSMSTVE 179
Query: 634 EAETAVEKFNRYDLNGRLLTVNKAAPKGSRPERQPRVYEPAFRVYVGNLPWDVDSGRLEQ 813
EAE AV+ F+RY+L+GRLLTVNKAAP+GS+PER PRV+EPAFR+YVGNLPWDVDS RLEQ
Sbjct: 180 EAEKAVDMFHRYELDGRLLTVNKAAPRGSQPERPPRVFEPAFRMYVGNLPWDVDSARLEQ 239
Query: 814 VFSEHGKVVEAKVVYDRETGRSRGFGFVTMSNETELNDAVAALDGQNMEGRAI 972
VFSEHGKVVEA+VV+DRETGRSRGFGFVTMS++TEL DA+AA DGQ ++GR I
Sbjct: 240 VFSEHGKVVEARVVFDRETGRSRGFGFVTMSSQTELEDAIAATDGQTLDGRTI 292
>gi|225452270|ref|XP_002270233.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 312
Score = 325 bits (831), Expect = 1e-086
Identities = 178/305 (58%), Positives = 215/305 (70%), Gaps = 24/305 (7%)
Frame = +1
Query: 109 MASSMVTSSLRPLAMSESSSSTIFSHPSFSTIHSSKTRCSFLA---KGTNLSRFSLSLKS 279
MASS + L+P +M+ES +++ +T+ ++KT L+ K L S S S
Sbjct: 1 MASS--NALLKPFSMAESCLTSV-----PTTLFTTKTPHPLLSLPPKPVRLFHLSCSCSS 53
Query: 280 -----KTHLKKSPFVTLVAETSDWSGEED---------GSSSSVAVEESDPEEATFSEEE 417
KT + V VA+TSDW+ +E+ S +E S EEA E
Sbjct: 54 SWVSLKTKTSPTTLVPFVAQTSDWAQQEEEEEKGGLTWDSEGGEEIEASGSEEAWEGEVG 113
Query: 418 GDVSEGGGGGGDFQEPPEEAKLFVGNLAYDVDSQALAMLFEQAGTVEIAEVIYNRETDQS 597
D E G + EPPEEAKLFVGNL YD+DS+ LA LF++AG VEIAEVIYNRETDQS
Sbjct: 114 EDGEESEGSEDTYSEPPEEAKLFVGNLPYDIDSEKLAQLFDEAGVVEIAEVIYNRETDQS 173
Query: 598 RGFGFVTMSTVEEAETAVEKFNRYDLNGRLLTVNKAAPKGSRPERQPRVYEPAFRVYVGN 777
RGFGF+TMSTVEEAE AVE FNRYDLNGR LTVNKAAP+GSRPER P+ +EP+FR+YVGN
Sbjct: 174 RGFGFITMSTVEEAEKAVEMFNRYDLNGRFLTVNKAAPRGSRPERPPQAFEPSFRIYVGN 233
Query: 778 LPWDVDSGRLEQVFSEHGKVVEAKVVYDRETGRSRGFGFVTMSNETELNDAVAALDGQNM 957
LPW VD RLEQVFSEHGKVV+A+VVYDR+T RSRGFGFVTMS+ETELNDA+AALDGQ++
Sbjct: 234 LPWQVDDARLEQVFSEHGKVVDARVVYDRDTQRSRGFGFVTMSSETELNDAIAALDGQSL 293
Query: 958 EGRAI 972
+GRAI
Sbjct: 294 DGRAI 298
>gi|255540443|ref|XP_002511286.1| ribonucleoprotein, chloroplast, putative
[Ricinus communis]
Length = 319
Score = 315 bits (806), Expect = 1e-083
Identities = 155/222 (69%), Positives = 185/222 (83%), Gaps = 5/222 (2%)
Frame = +1
Query: 322 ETSDWSGEEDGSSSSVAVEESDPEEATFS-----EEEGDVSEGGGGGGDFQEPPEEAKLF 486
+ +W G+E + + V + D E + + EEE +V EG F+EPPE+AK+F
Sbjct: 85 QEQEWEGQESETETEARVSDWDSEGESAAVDGQGEEEEEVFEGSEPEEAFEEPPEDAKIF 144
Query: 487 VGNLAYDVDSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAETAVEKFNR 666
VGNL YDVDSQ LAMLFEQAGTVEIAEVIYNRETD SRGFGFV+MSTVEEAE AVE F+R
Sbjct: 145 VGNLPYDVDSQKLAMLFEQAGTVEIAEVIYNRETDTSRGFGFVSMSTVEEAEKAVEMFHR 204
Query: 667 YDLNGRLLTVNKAAPKGSRPERQPRVYEPAFRVYVGNLPWDVDSGRLEQVFSEHGKVVEA 846
+DL+GRLLTVNKAAP+GSRPER PRV+EP +R+YVGNLPWDVD+ RLEQ+FSEHGKVV+A
Sbjct: 205 HDLDGRLLTVNKAAPRGSRPERPPRVFEPGYRIYVGNLPWDVDNARLEQIFSEHGKVVDA 264
Query: 847 KVVYDRETGRSRGFGFVTMSNETELNDAVAALDGQNMEGRAI 972
+VVYDR+TGRSRGFGFVTMS ETELNDA+AALDG++++GRAI
Sbjct: 265 RVVYDRDTGRSRGFGFVTMSTETELNDAIAALDGRSLDGRAI 306
>gi|297795791|ref|XP_002865780.1| hypothetical protein ARALYDRAFT_918033
[Arabidopsis lyrata subsp. lyrata]
Length = 291
Score = 315 bits (806), Expect = 1e-083
Identities = 159/209 (76%), Positives = 179/209 (85%), Gaps = 2/209 (0%)
Frame = +1
Query: 355 SSSSVAVEESDPEEATFSEEEGDVSEG--GGGGGDFQEPPEEAKLFVGNLAYDVDSQALA 528
S +S EE + E+ + V E GG F EPPEEAKLFVGNL YDVDSQALA
Sbjct: 71 SQTSDWPEEEEGEDGSIGGTSVTVDESFDTEDGGKFPEPPEEAKLFVGNLPYDVDSQALA 130
Query: 529 MLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAETAVEKFNRYDLNGRLLTVNKAA 708
MLFEQAGTVEI+EVIYNR+TDQSRGFGFVTMSTVEEA+ AVEKFNRY++NGRLLTVN AA
Sbjct: 131 MLFEQAGTVEISEVIYNRDTDQSRGFGFVTMSTVEEAKKAVEKFNRYEVNGRLLTVNIAA 190
Query: 709 PKGSRPERQPRVYEPAFRVYVGNLPWDVDSGRLEQVFSEHGKVVEAKVVYDRETGRSRGF 888
P+GSRPERQPR Y+ AFR+YVGNLPWDVD+ RL+QVFSEHGKVV+A+VVYDRETGRSRGF
Sbjct: 191 PRGSRPERQPRQYDAAFRIYVGNLPWDVDNDRLQQVFSEHGKVVDARVVYDRETGRSRGF 250
Query: 889 GFVTMSNETELNDAVAALDGQNMEGRAIE 975
GFVTMSNE E+NDA+AALDGQN+EGRAI+
Sbjct: 251 GFVTMSNENEVNDAIAALDGQNLEGRAIK 279
>gi|224133740|ref|XP_002321649.1| predicted protein [Populus trichocarpa]
Length = 295
Score = 314 bits (802), Expect = 3e-083
Identities = 161/243 (66%), Positives = 199/243 (81%), Gaps = 8/243 (3%)
Frame = +1
Query: 262 SLSLKSKTHLKKSPFVTLVAETSDWSGEEDGSSSSVAVE-----ESDPEEATFSEEEGDV 426
+LS+K KTHL S + VA+TSDW+ +E+ +++++ + E++ E+A SE E
Sbjct: 41 TLSVKPKTHL--SLTIPFVAQTSDWAQQEEENNTTITLTEVSDWEAEGEDAAASETEAVR 98
Query: 427 SEGGGGGGD-FQEPPEEAKLFVGNLAYDVDSQALAMLFEQAGTVEIAEVIYNRETDQSRG 603
EG G + F EPPEEAK++VGNL YDV S+ LAMLF+QAGTVEI+EVIYN ETD SRG
Sbjct: 99 GEGERGDEEGFVEPPEEAKIYVGNLPYDVTSEKLAMLFDQAGTVEISEVIYNTETDTSRG 158
Query: 604 FGFVTMSTVEEAETAVEKFNRYDLNGRLLTVNKAAPKGSRPERQPRVYEPAFRVYVGNLP 783
FGFVTMSTVEE++ A+E FNRY+L+GRLLTVNKAAP+GSRPER PRV EP++R+YVGNLP
Sbjct: 159 FGFVTMSTVEESDKAIEMFNRYNLDGRLLTVNKAAPRGSRPERPPRVSEPSYRIYVGNLP 218
Query: 784 WDVDSGRLEQVFSEHGKVVEAKVVYDRETGRSRGFGFVTMSNETELNDAVAALDGQNMEG 963
W VDSGRLE+VFSEHGKVV A+VV D ETGRSRGFGFVTMS+E+ELNDA+AALDGQ ++G
Sbjct: 219 WGVDSGRLEEVFSEHGKVVSAQVVSDWETGRSRGFGFVTMSSESELNDAIAALDGQELDG 278
Query: 964 RAI 972
RAI
Sbjct: 279 RAI 281
>gi|19032260|emb|CAD18921.1| RNA-binding protein precursor [Persea americana]
Length = 300
Score = 310 bits (792), Expect = 5e-082
Identities = 156/218 (71%), Positives = 176/218 (80%), Gaps = 4/218 (1%)
Frame = +1
Query: 319 AETSDWSGEEDGSSSSVAVEESDPEEATFSEEEGDVSEGGGGGGDFQEPPEEAKLFVGNL 498
A SDW GE +G E+++ E GD GG + PPEEAKLFVGNL
Sbjct: 73 ATLSDWEGEGEGEGE----EQTESGAEDGEESGGDGFVEGGEEDSYPLPPEEAKLFVGNL 128
Query: 499 AYDVDSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAETAVEKFNRYDLN 678
YDVD QALA LF+QAGTVE+AEVIYNRETDQSRGFGFVTMSTVEEAE AVE FNRYD+N
Sbjct: 129 PYDVDHQALAELFDQAGTVEVAEVIYNRETDQSRGFGFVTMSTVEEAEKAVEMFNRYDIN 188
Query: 679 GRLLTVNKAAPKGSRPERQPRVYEPAFRVYVGNLPWDVDSGRLEQVFSEHGKVVEAKVVY 858
GRLLTVNKAAP+G+R +R PR +EPAFR+YVGNLPW VD RLEQVFSEHGKVVEA+VVY
Sbjct: 189 GRLLTVNKAAPRGARVDRPPRAFEPAFRMYVGNLPWQVDDARLEQVFSEHGKVVEARVVY 248
Query: 859 DRETGRSRGFGFVTMSNETELNDAVAALDGQNMEGRAI 972
DRETGRSRGFGFVTMS +TEL+DA+AALDGQ+++GRAI
Sbjct: 249 DRETGRSRGFGFVTMSTQTELDDAIAALDGQSLDGRAI 286
>gi|388621|gb|AAA33039.1| RNA-binding protein [Mesembryanthemum crystallinum]
Length = 289
Score = 309 bits (791), Expect = 6e-082
Identities = 164/269 (60%), Positives = 199/269 (73%), Gaps = 13/269 (4%)
Frame = +1
Query: 169 STIFSHPSFSTIHSSKTRCSFLAKGTNLSRFSLSLKSKTHLKKSPFVTLVAETSDWSGEE 348
S FS PS T K S LS FSL ++ + S VT VA+TS+W
Sbjct: 20 SLFFSIPSKPT----KIPLSLSLSSPQLSSFSLQKQTLS----STVVTYVAQTSEW---- 67
Query: 349 DGSSSSVAVEESDPEEATFSEEEGDVSEGGGGGGD-FQEPPEEAKLFVGNLAYDVDSQAL 525
D ++ +EE +E ++ E VS+ G G+ FQEPPE+AKLFVGNL +DVDS+ L
Sbjct: 68 DQEGTNAVLEEGSDQEPSWGNTEAQVSDFGSDEGEGFQEPPEDAKLFVGNLPFDVDSEKL 127
Query: 526 AMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAETAVEKFNRYDLNGRLLTVNKA 705
A +FE AG VEIAEVIYNRETD+SRGFGFVTMSTVEEAE AVE ++++++NGR LTVNKA
Sbjct: 128 AQIFEGAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVELYHKFEVNGRFLTVNKA 187
Query: 706 APKGSRPERQPRVYEPAFRVYVGNLPWDVDSGRLEQVFSEHGKVVEAKVVYDRETGRSRG 885
AP+GSRPER PR YEP+FRVYVGNLPWDVD RLEQVFSEHGKV+ A+VV DRETGRSRG
Sbjct: 188 APRGSRPERAPREYEPSFRVYVGNLPWDVDDARLEQVFSEHGKVLSARVVSDRETGRSRG 247
Query: 886 FGFVTMSNETELNDAVAALDGQNMEGRAI 972
F FVTM++E+E+N+A+ ALDGQ +EGRAI
Sbjct: 248 FAFVTMASESEMNEAIGALDGQTLEGRAI 276
>gi|15240641|ref|NP_199836.1| chloroplast RNA-binding protein 31B [Arabidopsis
thaliana]
Length = 289
Score = 306 bits (782), Expect = 7e-081
Identities = 155/209 (74%), Positives = 176/209 (84%), Gaps = 2/209 (0%)
Frame = +1
Query: 355 SSSSVAVEESDPEEATFSEEEGDVSEG--GGGGGDFQEPPEEAKLFVGNLAYDVDSQALA 528
S +S EE + E+ + V E G F EPPEEAKLFVGNL YDVDSQALA
Sbjct: 71 SQTSNWAEEEEGEDGSIGGTSVTVDESFESEDGVGFPEPPEEAKLFVGNLPYDVDSQALA 130
Query: 529 MLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAETAVEKFNRYDLNGRLLTVNKAA 708
MLFEQAGTVEI+EVIYNR+TDQSRGFGFVTMSTVEEAE AVEKFN +++NGR LTVN+AA
Sbjct: 131 MLFEQAGTVEISEVIYNRDTDQSRGFGFVTMSTVEEAEKAVEKFNSFEVNGRRLTVNRAA 190
Query: 709 PKGSRPERQPRVYEPAFRVYVGNLPWDVDSGRLEQVFSEHGKVVEAKVVYDRETGRSRGF 888
P+GSRPERQPRVY+ AFR+YVGNLPWDVDSGRLE++FSEHGKVV+A+VV DRETGRSRGF
Sbjct: 191 PRGSRPERQPRVYDAAFRIYVGNLPWDVDSGRLERLFSEHGKVVDARVVSDRETGRSRGF 250
Query: 889 GFVTMSNETELNDAVAALDGQNMEGRAIE 975
GFV MSNE E+N A+AALDGQN+EGRAI+
Sbjct: 251 GFVQMSNENEVNVAIAALDGQNLEGRAIK 279
>gi|224119514|ref|XP_002318093.1| predicted protein [Populus trichocarpa]
Length = 327
Score = 304 bits (778), Expect = 2e-080
Identities = 155/216 (71%), Positives = 175/216 (81%), Gaps = 2/216 (0%)
Frame = +1
Query: 328 SDWSGEEDGSSSSVAVE-ESDPEEATFSEEEGDVSEGGGGGGDFQEPPEEAKLFVGNLAY 504
S+W EE E E++ E+A +E E G G F EPPEEAK+FVGNL Y
Sbjct: 100 SNWVNEESNDFEGKVPEWEAEGEDAAATEAIRGEGESGDEEG-FVEPPEEAKIFVGNLPY 158
Query: 505 DVDSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAETAVEKFNRYDLNGR 684
DVDS+ LAMLFEQAGTVEIAEVIYNRETD SRGFGFVTMSTVEE+E AVE +RYDL+GR
Sbjct: 159 DVDSEKLAMLFEQAGTVEIAEVIYNRETDTSRGFGFVTMSTVEESEKAVEMLHRYDLDGR 218
Query: 685 LLTVNKAAPKGSRPERQPRVYEPAFRVYVGNLPWDVDSGRLEQVFSEHGKVVEAKVVYDR 864
LTVNKAAP+GSRPER PRV EP +R+YVGNLPWDVDSGRLEQ+FSEHGKVV A+VV+DR
Sbjct: 219 FLTVNKAAPRGSRPERPPRVSEPGYRIYVGNLPWDVDSGRLEQIFSEHGKVVSARVVFDR 278
Query: 865 ETGRSRGFGFVTMSNETELNDAVAALDGQNMEGRAI 972
ET RSRGFGFVTMS E+ELNDA+AALDGQN++GR I
Sbjct: 279 ETNRSRGFGFVTMSTESELNDAIAALDGQNLDGRPI 314
>gi|296087572|emb|CBI34828.3| unnamed protein product [Vitis vinifera]
Length = 272
Score = 304 bits (776), Expect = 3e-080
Identities = 146/188 (77%), Positives = 165/188 (87%)
Frame = +1
Query: 409 EEEGDVSEGGGGGGDFQEPPEEAKLFVGNLAYDVDSQALAMLFEQAGTVEIAEVIYNRET 588
EEE D E G + EPPEEAKLFVGNL YD+DS+ LA LF++AG VEIAEVIYNRET
Sbjct: 71 EEEKDGEESEGSEDTYSEPPEEAKLFVGNLPYDIDSEKLAQLFDEAGVVEIAEVIYNRET 130
Query: 589 DQSRGFGFVTMSTVEEAETAVEKFNRYDLNGRLLTVNKAAPKGSRPERQPRVYEPAFRVY 768
DQSRGFGF+TMSTVEEAE AVE FNRYDLNGR LTVNKAAP+GSRPER P+ +EP+FR+Y
Sbjct: 131 DQSRGFGFITMSTVEEAEKAVEMFNRYDLNGRFLTVNKAAPRGSRPERPPQAFEPSFRIY 190
Query: 769 VGNLPWDVDSGRLEQVFSEHGKVVEAKVVYDRETGRSRGFGFVTMSNETELNDAVAALDG 948
VGNLPW VD RLEQVFSEHGKVV+A+VVYDR+T RSRGFGFVTMS+ETELNDA+AALDG
Sbjct: 191 VGNLPWQVDDARLEQVFSEHGKVVDARVVYDRDTQRSRGFGFVTMSSETELNDAIAALDG 250
Query: 949 QNMEGRAI 972
Q+++GRAI
Sbjct: 251 QSLDGRAI 258
>gi|168274276|dbj|BAG09558.1| chloroplast RNA binding protein [Mesembryanthemum
crystallinum]
Length = 306
Score = 302 bits (772), Expect = 1e-079
Identities = 171/299 (57%), Positives = 211/299 (70%), Gaps = 17/299 (5%)
Frame = +1
Query: 109 MASSMVTSSLRPLAMSESSSSTIFSHPSFSTIHSSKTRCSFLAKGTNLSRFSLSLKSK-T 285
M+S+ L+ L++S + +T PS + S K T L+ S+S+ S +
Sbjct: 1 MSSATANPCLKTLSLSHNCFTTSLYTPSI--FNPKSHNFSIPLKPTKLN-LSISVFSPFS 57
Query: 286 HLKKSPFVTLVAETSDWSGEEDGSSSSVAVEESDPEEATFSEEEGDVSE---GGGGGGD- 453
K S V+ VA+TSDW E SS+++ +E AT+ + SE G G D
Sbjct: 58 PQKSSTIVSYVAQTSDWDQE---SSNALLDDEQQVGGATWGTQNFGDSEPQVSGVGNEDE 114
Query: 454 ------FQEPPEEAKLFVGNLAYDVDSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFV 615
F EPPEEAKLFVGNL YDVDS+ LA +F+ AG VEIAEVIYNRETD+SRGFGFV
Sbjct: 115 EESEQGFSEPPEEAKLFVGNLPYDVDSERLAQIFDGAGVVEIAEVIYNRETDRSRGFGFV 174
Query: 616 TMSTVEEAETAVEKFNRYDLNGRLLTVNKAAPKGSRPERQPRVYEPAFRVYVGNLPWDVD 795
TMSTVEEAE AVE N +D+NGRLLTVNKAAP+GSRPER PR +EP+ RVYVGNLPWDVD
Sbjct: 175 TMSTVEEAEKAVEMLNGFDMNGRLLTVNKAAPRGSRPERPPREFEPSCRVYVGNLPWDVD 234
Query: 796 SGRLEQVFSEHGKVVEAKVVYDRETGRSRGFGFVTMSNETELNDAVAALDGQNMEGRAI 972
+ RLEQVFSEHGKV+ A+VV DRETGRSRGFGFV+M++E+E+NDA+AALDGQ ++GRAI
Sbjct: 235 NARLEQVFSEHGKVLSARVVSDRETGRSRGFGFVSMASESEMNDAIAALDGQTLDGRAI 293
>gi|147838354|emb|CAN61133.1| hypothetical protein VITISV_039575 [Vitis
vinifera]
Length = 1122
Score = 298 bits (762), Expect = 1e-078
Identities = 149/217 (68%), Positives = 172/217 (79%)
Frame = +1
Query: 322 ETSDWSGEEDGSSSSVAVEESDPEEATFSEEEGDVSEGGGGGGDFQEPPEEAKLFVGNLA 501
E W EE + A + E +E D G + EPPEEAK+FVGNL
Sbjct: 892 EKVTWENEEVEGPDAQASDWESEGEGAVTEAISDDGVVDDGEDSYSEPPEEAKVFVGNLP 951
Query: 502 YDVDSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAETAVEKFNRYDLNG 681
YDVDS+ LA LFEQAG VEIAEVIYNRETD+SRGFGFV+MSTVEEAE AV+ F+RY+L+G
Sbjct: 952 YDVDSERLARLFEQAGVVEIAEVIYNRETDRSRGFGFVSMSTVEEAEKAVDMFHRYELDG 1011
Query: 682 RLLTVNKAAPKGSRPERQPRVYEPAFRVYVGNLPWDVDSGRLEQVFSEHGKVVEAKVVYD 861
RLLTVNKAAP+GS+PER PRV+EPAFR+YVGNLPWDVDS RLEQVFSEHGKVVEA+VV+D
Sbjct: 1012 RLLTVNKAAPRGSQPERPPRVFEPAFRMYVGNLPWDVDSARLEQVFSEHGKVVEARVVFD 1071
Query: 862 RETGRSRGFGFVTMSNETELNDAVAALDGQNMEGRAI 972
RETGRSRGFGFVTMS++TEL DA+AA DGQ ++GR I
Sbjct: 1072 RETGRSRGFGFVTMSSQTELEDAIAATDGQTLDGRTI 1108
>gi|225456840|ref|XP_002278832.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 327
Score = 298 bits (762), Expect = 1e-078
Identities = 149/217 (68%), Positives = 172/217 (79%)
Frame = +1
Query: 322 ETSDWSGEEDGSSSSVAVEESDPEEATFSEEEGDVSEGGGGGGDFQEPPEEAKLFVGNLA 501
E W EE + A + E +E D G + EPPEEAK+FVGNL
Sbjct: 97 EKVTWENEEVEGPDAQASDWESEGEGAVTEAISDDGVVDDGEDSYSEPPEEAKVFVGNLP 156
Query: 502 YDVDSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAETAVEKFNRYDLNG 681
YDVDS+ LA LFEQAG VEIAEVIYNRETD+SRGFGFV+MSTVEEAE AV+ F+RY+L+G
Sbjct: 157 YDVDSERLARLFEQAGVVEIAEVIYNRETDRSRGFGFVSMSTVEEAEKAVDMFHRYELDG 216
Query: 682 RLLTVNKAAPKGSRPERQPRVYEPAFRVYVGNLPWDVDSGRLEQVFSEHGKVVEAKVVYD 861
RLLTVNKAAP+GS+PER PRV+EPAFR+YVGNLPWDVDS RLEQVFSEHGKVVEA+VV+D
Sbjct: 217 RLLTVNKAAPRGSQPERPPRVFEPAFRMYVGNLPWDVDSARLEQVFSEHGKVVEARVVFD 276
Query: 862 RETGRSRGFGFVTMSNETELNDAVAALDGQNMEGRAI 972
RETGRSRGFGFVTMS++TEL DA+AA DGQ ++GR I
Sbjct: 277 RETGRSRGFGFVTMSSQTELEDAIAATDGQTLDGRTI 313
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,408,156,835,029
Number of Sequences: 15229318
Number of Extensions: 5408156835029
Number of Successful Extensions: 1269931805
Number of sequences better than 0.0: 0
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