BLASTX 7.6.2
Query= UN50456 /QuerySize=1200
(1199 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G24770.1 | Symbols: RBP31, ATRBP31, CP31, ATRB... 332 3e-091
TAIR9_protein||AT5G50250.1 | Symbols: | 31 kDa ribonucleoprotei... 306 3e-083
TAIR9_protein||AT3G52380.1 | Symbols: CP33, PDE322 | CP33; RNA b... 152 6e-037
TAIR9_protein||AT1G60000.1 | Symbols: | 29 kDa ribonucleoprotei... 147 2e-035
TAIR9_protein||AT2G37220.1 | Symbols: | 29 kDa ribonucleoprotei... 104 1e-022
TAIR9_protein||AT3G53460.1 | Symbols: CP29 | CP29; RNA binding /... 101 2e-021
TAIR9_protein||AT3G53460.2 | Symbols: CP29 | CP29; RNA binding /... 101 2e-021
TAIR9_protein||AT2G21660.1 | Symbols: ATGRP7, CCR2, GR-RBP7, GRP... 84 2e-016
TAIR9_protein||AT2G21660.2 | Symbols: ATGRP7, CCR2 | CCR2 (COLD,... 84 2e-016
TAIR9_protein||AT3G23830.1 | Symbols: GR-RBP4, GRP4 | GRP4 (GLYC... 78 9e-015
TAIR9_protein||AT3G23830.2 | Symbols: GR-RBP4, GRP4 | GRP4 (GLYC... 78 9e-015
TAIR9_protein||AT4G39260.1 | Symbols: CCR1, ATGRP8, GR-RBP8, GRP... 77 1e-014
TAIR9_protein||AT4G39260.2 | Symbols: CCR1, ATGRP8, GRP8 | GR-RB... 77 1e-014
TAIR9_protein||AT4G39260.3 | Symbols: CCR1, ATGRP8, GRP8 | GR-RB... 77 1e-014
TAIR9_protein||AT3G26420.1 | Symbols: ATRZ-1A | ATRZ-1A; RNA bin... 76 3e-014
>TAIR9_protein||AT4G24770.1 | Symbols: RBP31, ATRBP31, CP31, ATRBP33 | RBP31
(31-KDA RNA BINDING PROTEIN); RNA binding / poly(U) binding |
chr4:12766223-12767952 REVERSE
Length = 330
Score = 332 bits (850), Expect = 3e-091
Identities = 199/317 (62%), Positives = 219/317 (69%), Gaps = 31/317 (9%)
Frame = +1
Query: 88 SSLTILAMA-SSMVTSSLRPLAMSESSSSTIFSHP------------SFSTIHSSKTRCS 228
SSL LAMA SS T P S SSS I S SFS + S +
Sbjct: 8 SSLKPLAMADSSSSTIFSHPSISSTISSSRIRSSSVSLLTGRINLPLSFSRVSLSLKTKT 67
Query: 229 FLAKGTNLSRFSLSLKSKTHLKKSPFVTLVAETSDWSGEEDGSSSSVAVEESDPEEATFS 408
L K +S + + S + E S E + S S V E D E S
Sbjct: 68 HLKKSPFVSFVA---------QTSDWAEEGGEGSVAVEETENSLESQDVSEGDESEGDAS 118
Query: 409 --------EEEGDVSEGG-GGGGDFQEPPEEAKLFVGNLAYDVDSQALAMLFEQAGTVEI 561
E EGDVSEG +F EP EEAKLFVGNLAYDV+SQALAMLFEQAGTVEI
Sbjct: 119 EGDVSEGDESEGDVSEGAVSERAEFPEPSEEAKLFVGNLAYDVNSQALAMLFEQAGTVEI 178
Query: 562 AEVIYNRETDQSRGFGFVTMSTVEEAETAVEKFNRYDLNGRLLTVNKAAPKGSRPERQPR 741
AEVIYNRETDQSRGFGFVTMS+V+EAETAVEKFNRYDLNGRLLTVNKAAP+GSRPER PR
Sbjct: 179 AEVIYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERAPR 238
Query: 742 VYEPAFRVYVGNLPWDVDSGRLEQVFSEHGKVVEAKVVYDRETGRSRGFGFVTMSNETEL 921
VYEPAFRVYVGNLPWDVD+GRLEQ+FSEHGKVVEA+VVYDRETGRSRGFGFVTMS+ EL
Sbjct: 239 VYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDEL 298
Query: 922 NDAVAALDGQNMEGRAI 972
N+A++ALDGQN+EGRAI
Sbjct: 299 NEAISALDGQNLEGRAI 315
>TAIR9_protein||AT5G50250.1 | Symbols: | 31 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein RNP-T, putative / RNA-binding protein
1/2/3, putative / RNA-binding protein cp31, putative |
chr5:20452677-20453965 REVERSE
Length = 290
Score = 306 bits (782), Expect = 3e-083
Identities = 155/209 (74%), Positives = 176/209 (84%), Gaps = 2/209 (0%)
Frame = +1
Query: 355 SSSSVAVEESDPEEATFSEEEGDVSEG--GGGGGDFQEPPEEAKLFVGNLAYDVDSQALA 528
S +S EE + E+ + V E G F EPPEEAKLFVGNL YDVDSQALA
Sbjct: 71 SQTSNWAEEEEGEDGSIGGTSVTVDESFESEDGVGFPEPPEEAKLFVGNLPYDVDSQALA 130
Query: 529 MLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAETAVEKFNRYDLNGRLLTVNKAA 708
MLFEQAGTVEI+EVIYNR+TDQSRGFGFVTMSTVEEAE AVEKFN +++NGR LTVN+AA
Sbjct: 131 MLFEQAGTVEISEVIYNRDTDQSRGFGFVTMSTVEEAEKAVEKFNSFEVNGRRLTVNRAA 190
Query: 709 PKGSRPERQPRVYEPAFRVYVGNLPWDVDSGRLEQVFSEHGKVVEAKVVYDRETGRSRGF 888
P+GSRPERQPRVY+ AFR+YVGNLPWDVDSGRLE++FSEHGKVV+A+VV DRETGRSRGF
Sbjct: 191 PRGSRPERQPRVYDAAFRIYVGNLPWDVDSGRLERLFSEHGKVVDARVVSDRETGRSRGF 250
Query: 889 GFVTMSNETELNDAVAALDGQNMEGRAIE 975
GFV MSNE E+N A+AALDGQN+EGRAI+
Sbjct: 251 GFVQMSNENEVNVAIAALDGQNLEGRAIK 279
>TAIR9_protein||AT3G52380.1 | Symbols: CP33, PDE322 | CP33; RNA binding |
chr3:19421619-19422855 FORWARD
Length = 330
Score = 152 bits (382), Expect = 6e-037
Identities = 97/290 (33%), Positives = 156/290 (53%), Gaps = 23/290 (7%)
Frame = +1
Query: 148 AMSESSSSTIFSHPSFSTIHSSKTRCSFLAKGTNLSRFSL------SLKSKTHLKKSPFV 309
A++ S+++T S +F+ + SS + + T S F L L +++++ F
Sbjct: 9 AVAVSAAATASSAATFNPLLSSHSNSQLFYRFTPKS-FKLVANCPNPLILHSNIRRHRF- 66
Query: 310 TLVAETSDWSGEEDGSSSSVAVEESDPEEATFSEEEGDVSEGGGGGGDFQEPPEEAKLFV 489
A ++ S +D +SV EE EE EEE + + Q EE +L+V
Sbjct: 67 -FCAAETEASSADDEIQASVEEEEEVEEEGDEGEEEVEEEK-----QTTQASGEEGRLYV 120
Query: 490 GNLAYDVDSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAETAVEKFNRY 669
GNL Y + S L+ +F +AGTV +++Y++ TD+SRGFGFVTM ++EEA+ A++ FN
Sbjct: 121 GNLPYTITSSELSQIFGEAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKEAMQMFNSS 180
Query: 670 DLNGRLLTVN-KAAPKGSRPE--------RQPRVYEPAFRVYVGNLPWDVDSGRLEQVFS 822
+ GR + VN P+G E + +VY GNL W++ S L+ F
Sbjct: 181 QIGGRTVKVNFPEVPRGGENEVMRTKIRDNNRSYVDSPHKVYAGNLGWNLTSQGLKDAFG 240
Query: 823 EHGKVVEAKVVYDRETGRSRGFGFVTMSNETELNDAVAALDGQNMEGRAI 972
+ V+ AKV+Y+R TGRSRGFGF++ + + A+A ++G +EGRA+
Sbjct: 241 DQPGVLGAKVIYERNTGRSRGFGFISFESAENVQSALATMNGVEVEGRAL 290
>TAIR9_protein||AT1G60000.1 | Symbols: | 29 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein cp29, putative | chr1:22093678-22094540
REVERSE
Length = 259
Score = 147 bits (369), Expect = 2e-035
Identities = 83/190 (43%), Positives = 112/190 (58%), Gaps = 9/190 (4%)
Frame = +1
Query: 409 EEEGDVSEGGGGGGDFQEPPE--EAKLFVGNLAYDVDSQALAMLFEQAGTVEIAEVIYNR 582
EEE D G +PP KL+ GNL Y+VDS LA + + E+ EV+YNR
Sbjct: 66 EEEKD-----DGASAVLDPPAAVNTKLYFGNLPYNVDSATLAQIIQDFANPELVEVLYNR 120
Query: 583 ETDQSRGFGFVTMSTVEEAETAVEKFNRYDLNGRLLTVNKAAPKGSRPERQPRVYEPAFR 762
+T QSRGF FVTMS VE+ ++ + + GR L VN A +P ++P E +
Sbjct: 121 DTGQSRGFAFVTMSNVEDCNIIIDNLDGTEYLGRALKVNFA--DKPKPNKEPLYPETEHK 178
Query: 763 VYVGNLPWDVDSGRLEQVFSEHGKVVEAKVVYDRETGRSRGFGFVTMSNETELNDAVAAL 942
++VGNL W V S L F E G VV A+VV+D +TGRSRG+GFV S++ E+ A+ +L
Sbjct: 179 LFVGNLSWTVTSESLAGAFRECGDVVGARVVFDGDTGRSRGYGFVCYSSKAEMETALESL 238
Query: 943 DGQNMEGRAI 972
DG +EGRAI
Sbjct: 239 DGFELEGRAI 248
>TAIR9_protein||AT2G37220.1 | Symbols: | 29 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein cp29, putative | chr2:15634980-15636331
REVERSE
Length = 290
Score = 104 bits (258), Expect = 1e-022
Identities = 71/181 (39%), Positives = 101/181 (55%), Gaps = 13/181 (7%)
Frame = +1
Query: 235 AKGTNLSRFSLSLKSKTH-LKKSPFVTLVAETSDWSGEEDGSSSSVAVEESDPEEATFSE 411
A ++L+ S + KS + + V+L++ + + D S S+A + + P + F+
Sbjct: 3 ASASSLALSSFNPKSLPFGVSRPASVSLLSPSLSFKLNSDSVSFSIAAKWNSP-ASRFAR 61
Query: 412 EEGDVSE---GGGGGGDFQEPPEEA-----KLFVGNLAYDVDSQALAMLFEQAGTVEIAE 567
SE G D P E++ KLFVGNL ++VDS LA LFE AG VE+ E
Sbjct: 62 NVAITSEFEVEEDGFADVAPPKEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVE 121
Query: 568 VIYNRETDQSRGFGFVTMSTVEEAETAVEKFNRYDLNGRLLTVNKAAPKGSRPE---RQP 738
VIY++ T +SRGFGFVTMS+V E E A ++FN Y+L+GR L VN P R + R P
Sbjct: 122 VIYDKITGRSRGFGFVTMSSVSEVEAAAQQFNGYELDGRPLRVNAGPPPPKREDGFSRGP 181
Query: 739 R 741
R
Sbjct: 182 R 182
Score = 94 bits (231), Expect = 2e-019
Identities = 42/71 (59%), Positives = 56/71 (78%)
Frame = +1
Query: 760 RVYVGNLPWDVDSGRLEQVFSEHGKVVEAKVVYDRETGRSRGFGFVTMSNETELNDAVAA 939
RVYVGNL W VD LE +FSE GKVVEA+V+YDR++GRS+GFGFVT + E+ +A+ +
Sbjct: 205 RVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKS 264
Query: 940 LDGQNMEGRAI 972
LDG +++GR I
Sbjct: 265 LDGADLDGRQI 275
>TAIR9_protein||AT3G53460.1 | Symbols: CP29 | CP29; RNA binding / poly(U)
binding | chr3:19819738-19821423 REVERSE
Length = 343
Score = 101 bits (249), Expect = 2e-021
Identities = 57/118 (48%), Positives = 70/118 (59%), Gaps = 5/118 (4%)
Frame = +1
Query: 403 FSEEEGDVSEGGGGGGDFQEP--PEEAKLFVGNLAYDVDSQALAMLFEQAGTVEIAEVIY 576
F EE D+ G + + KLFVGNL+++VDS LA LFE AG VE+ EVIY
Sbjct: 73 FEVEEDDMFADGDDSAPVERNSFSPDLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIY 132
Query: 577 NRETDQSRGFGFVTMSTVEEAETAVEKFNRYDLNGRLLTVNKAAPKGSRPE---RQPR 741
++ T +SRGFGFVTMST E E A ++FN Y+ GR L VN P R E R PR
Sbjct: 133 DKVTGRSRGFGFVTMSTAAEVEAAAQQFNGYEFEGRPLRVNAGPPPPKREESFSRGPR 190
Score = 91 bits (224), Expect = 1e-018
Identities = 40/71 (56%), Positives = 57/71 (80%)
Frame = +1
Query: 760 RVYVGNLPWDVDSGRLEQVFSEHGKVVEAKVVYDRETGRSRGFGFVTMSNETELNDAVAA 939
R+YVGNL W VD LE +F+E GKVVEA+V+YDR++GRS+GFGFVT+S+ E+ A+ +
Sbjct: 258 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 317
Query: 940 LDGQNMEGRAI 972
L+G +++GR I
Sbjct: 318 LNGADLDGRQI 328
Score = 78 bits (190), Expect = 1e-014
Identities = 40/99 (40%), Positives = 60/99 (60%)
Frame = +1
Query: 427 SEGGGGGGDFQEPPEEAKLFVGNLAYDVDSQALAMLFEQAGTVEIAEVIYNRETDQSRGF 606
S G G G +L+VGNL++ VD AL LF + G V A VIY+R++ +S+GF
Sbjct: 241 SSYGSGSGSGSGSGSGNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGF 300
Query: 607 GFVTMSTVEEAETAVEKFNRYDLNGRLLTVNKAAPKGSR 723
GFVT+S+ +E + A+ N DL+GR + V++A + R
Sbjct: 301 GFVTLSSSQEVQKAINSLNGADLDGRQIRVSEAEARPPR 339
>TAIR9_protein||AT3G53460.2 | Symbols: CP29 | CP29; RNA binding / poly(U)
binding | chr3:19819738-19821423 REVERSE
Length = 343
Score = 101 bits (249), Expect = 2e-021
Identities = 57/118 (48%), Positives = 70/118 (59%), Gaps = 5/118 (4%)
Frame = +1
Query: 403 FSEEEGDVSEGGGGGGDFQEP--PEEAKLFVGNLAYDVDSQALAMLFEQAGTVEIAEVIY 576
F EE D+ G + + KLFVGNL+++VDS LA LFE AG VE+ EVIY
Sbjct: 73 FEVEEDDMFADGDDSAPVERNSFSPDLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIY 132
Query: 577 NRETDQSRGFGFVTMSTVEEAETAVEKFNRYDLNGRLLTVNKAAPKGSRPE---RQPR 741
++ T +SRGFGFVTMST E E A ++FN Y+ GR L VN P R E R PR
Sbjct: 133 DKVTGRSRGFGFVTMSTAAEVEAAAQQFNGYEFEGRPLRVNAGPPPPKREESFSRGPR 190
Score = 91 bits (224), Expect = 1e-018
Identities = 40/71 (56%), Positives = 57/71 (80%)
Frame = +1
Query: 760 RVYVGNLPWDVDSGRLEQVFSEHGKVVEAKVVYDRETGRSRGFGFVTMSNETELNDAVAA 939
R+YVGNL W VD LE +F+E GKVVEA+V+YDR++GRS+GFGFVT+S+ E+ A+ +
Sbjct: 258 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 317
Query: 940 LDGQNMEGRAI 972
L+G +++GR I
Sbjct: 318 LNGADLDGRQI 328
Score = 78 bits (190), Expect = 1e-014
Identities = 40/99 (40%), Positives = 60/99 (60%)
Frame = +1
Query: 427 SEGGGGGGDFQEPPEEAKLFVGNLAYDVDSQALAMLFEQAGTVEIAEVIYNRETDQSRGF 606
S G G G +L+VGNL++ VD AL LF + G V A VIY+R++ +S+GF
Sbjct: 241 SSYGSGSGSGSGSGSGNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGF 300
Query: 607 GFVTMSTVEEAETAVEKFNRYDLNGRLLTVNKAAPKGSR 723
GFVT+S+ +E + A+ N DL+GR + V++A + R
Sbjct: 301 GFVTLSSSQEVQKAINSLNGADLDGRQIRVSEAEARPPR 339
>TAIR9_protein||AT2G21660.1 | Symbols: ATGRP7, CCR2, GR-RBP7, GRP7 | CCR2 (COLD,
CIRCADIAN RHYTHM, AND RNA BINDING 2); RNA binding / double-stranded DNA
binding / single-stranded DNA binding | chr2:9265477-9266316 REVERSE
Length = 177
Score = 84 bits (205), Expect = 2e-016
Identities = 34/72 (47%), Positives = 53/72 (73%)
Frame = +1
Query: 757 FRVYVGNLPWDVDSGRLEQVFSEHGKVVEAKVVYDRETGRSRGFGFVTMSNETELNDAVA 936
+R +VG L W D LE F+++G V+++K++ DRETGRSRGFGFVT +E + DA+
Sbjct: 8 YRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIE 67
Query: 937 ALDGQNMEGRAI 972
++GQ+++GR+I
Sbjct: 68 GMNGQDLDGRSI 79
>TAIR9_protein||AT2G21660.2 | Symbols: ATGRP7, CCR2 | CCR2 (COLD, CIRCADIAN
RHYTHM, AND RNA BINDING 2); RNA binding / double-stranded DNA binding /
single-stranded DNA binding | chr2:9265477-9266316 REVERSE
Length = 160
Score = 84 bits (205), Expect = 2e-016
Identities = 34/72 (47%), Positives = 53/72 (73%)
Frame = +1
Query: 757 FRVYVGNLPWDVDSGRLEQVFSEHGKVVEAKVVYDRETGRSRGFGFVTMSNETELNDAVA 936
+R +VG L W D LE F+++G V+++K++ DRETGRSRGFGFVT +E + DA+
Sbjct: 8 YRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIE 67
Query: 937 ALDGQNMEGRAI 972
++GQ+++GR+I
Sbjct: 68 GMNGQDLDGRSI 79
>TAIR9_protein||AT3G23830.1 | Symbols: GR-RBP4, GRP4 | GRP4 (GLYCINE-RICH
RNA-BINDING PROTEIN 4); RNA binding / double-stranded DNA binding /
single-stranded DNA binding | chr3:8606762-8607677 REVERSE
Length = 137
Score = 78 bits (191), Expect = 9e-015
Identities = 35/71 (49%), Positives = 48/71 (67%)
Frame = +1
Query: 760 RVYVGNLPWDVDSGRLEQVFSEHGKVVEAKVVYDRETGRSRGFGFVTMSNETELNDAVAA 939
+++VG L W D L+Q F+ G+V EA V+ DRETGRSRGFGFV+ S E N+A+
Sbjct: 36 KLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAIKE 95
Query: 940 LDGQNMEGRAI 972
+DG+ + GR I
Sbjct: 96 MDGKELNGRQI 106
>TAIR9_protein||AT3G23830.2 | Symbols: GR-RBP4, GRP4 | GRP4 (GLYCINE-RICH
RNA-BINDING PROTEIN 4); RNA binding / double-stranded DNA binding /
single-stranded DNA binding | chr3:8606762-8607677 REVERSE
Length = 137
Score = 78 bits (191), Expect = 9e-015
Identities = 35/71 (49%), Positives = 48/71 (67%)
Frame = +1
Query: 760 RVYVGNLPWDVDSGRLEQVFSEHGKVVEAKVVYDRETGRSRGFGFVTMSNETELNDAVAA 939
+++VG L W D L+Q F+ G+V EA V+ DRETGRSRGFGFV+ S E N+A+
Sbjct: 36 KLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAIKE 95
Query: 940 LDGQNMEGRAI 972
+DG+ + GR I
Sbjct: 96 MDGKELNGRQI 106
>TAIR9_protein||AT4G39260.1 | Symbols: CCR1, ATGRP8, GR-RBP8, GRP8 | GR-RBP8;
RNA binding / nucleic acid binding / nucleotide binding |
chr4:18274166-18274958 REVERSE
Length = 170
Score = 77 bits (189), Expect = 1e-014
Identities = 32/75 (42%), Positives = 52/75 (69%)
Frame = +1
Query: 748 EPAFRVYVGNLPWDVDSGRLEQVFSEHGKVVEAKVVYDRETGRSRGFGFVTMSNETELND 927
E +R +VG L W + L++ FS+ G V+++K++ DRE+GRSRGFGFVT +E + D
Sbjct: 3 EVEYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRD 62
Query: 928 AVAALDGQNMEGRAI 972
A+ ++G+ ++GR I
Sbjct: 63 AIEEMNGKELDGRVI 77
>TAIR9_protein||AT4G39260.2 | Symbols: CCR1, ATGRP8, GRP8 | GR-RBP8; RNA binding
/ nucleic acid binding / nucleotide binding | chr4:18274166-18274958
REVERSE
Length = 127
Score = 77 bits (189), Expect = 1e-014
Identities = 32/75 (42%), Positives = 52/75 (69%)
Frame = +1
Query: 748 EPAFRVYVGNLPWDVDSGRLEQVFSEHGKVVEAKVVYDRETGRSRGFGFVTMSNETELND 927
E +R +VG L W + L++ FS+ G V+++K++ DRE+GRSRGFGFVT +E + D
Sbjct: 3 EVEYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRD 62
Query: 928 AVAALDGQNMEGRAI 972
A+ ++G+ ++GR I
Sbjct: 63 AIEEMNGKELDGRVI 77
>TAIR9_protein||AT4G39260.3 | Symbols: CCR1, ATGRP8, GRP8 | GR-RBP8; RNA binding
/ nucleic acid binding / nucleotide binding | chr4:18274166-18274958
REVERSE
Length = 93
Score = 77 bits (189), Expect = 1e-014
Identities = 32/75 (42%), Positives = 52/75 (69%)
Frame = +1
Query: 748 EPAFRVYVGNLPWDVDSGRLEQVFSEHGKVVEAKVVYDRETGRSRGFGFVTMSNETELND 927
E +R +VG L W + L++ FS+ G V+++K++ DRE+GRSRGFGFVT +E + D
Sbjct: 3 EVEYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRD 62
Query: 928 AVAALDGQNMEGRAI 972
A+ ++G+ ++GR I
Sbjct: 63 AIEEMNGKELDGRVI 77
>TAIR9_protein||AT3G26420.1 | Symbols: ATRZ-1A | ATRZ-1A; RNA binding /
nucleotide binding | chr3:9671953-9673055 FORWARD
Length = 246
Score = 76 bits (186), Expect = 3e-014
Identities = 31/75 (41%), Positives = 51/75 (68%)
Frame = +1
Query: 748 EPAFRVYVGNLPWDVDSGRLEQVFSEHGKVVEAKVVYDRETGRSRGFGFVTMSNETELND 927
+P +R ++G L W L F ++G +VEAKVV D+ +GRSRGFGF+T + +++
Sbjct: 4 DPEYRCFIGGLAWTTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKAMDE 63
Query: 928 AVAALDGQNMEGRAI 972
A+AA++G +++GR I
Sbjct: 64 AIAAMNGMDLDGRTI 78
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,912,720,294
Number of Sequences: 33410
Number of Extensions: 23912720294
Number of Successful Extensions: 750803576
Number of sequences better than 0.0: 0
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