BLASTX 7.6.2
Query= UN50480 /QuerySize=519
(518 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|15224217|ref|NP_179464.1| putative small nuclear ribonucleopr... 174 4e-042
gi|18417572|ref|NP_567844.1| small nuclear ribonucleoprotein E [... 170 8e-041
gi|7269933|emb|CAB81026.1| small nuclear ribonucleoprotein homol... 166 1e-039
gi|242051601|ref|XP_002454946.1| hypothetical protein SORBIDRAFT... 166 1e-039
gi|115443949|ref|NP_001045754.1| Os02g0126700 [Oryza sativa Japo... 166 2e-039
gi|225455956|ref|XP_002278114.1| PREDICTED: similar to small nuc... 164 6e-039
gi|255628153|gb|ACU14421.1| unknown [Glycine max] 164 7e-039
gi|168027770|ref|XP_001766402.1| predicted protein [Physcomitrel... 163 1e-038
gi|168008828|ref|XP_001757108.1| predicted protein [Physcomitrel... 163 1e-038
gi|195606896|gb|ACG25278.1| small nuclear ribonucleoprotein E [Z... 163 1e-038
gi|195638708|gb|ACG38822.1| small nuclear ribonucleoprotein E [Z... 163 1e-038
gi|255627911|gb|ACU14300.1| unknown [Glycine max] 163 2e-038
gi|282848216|gb|ADB02889.1| small nuclear ribonucleoprotein poly... 163 2e-038
gi|224117550|ref|XP_002331664.1| predicted protein [Populus tric... 161 4e-038
gi|226529493|ref|NP_001148430.1| small nuclear ribonucleoprotein... 161 4e-038
gi|116779305|gb|ABK21228.1| unknown [Picea sitchensis] 161 5e-038
gi|255563612|ref|XP_002522808.1| Small nuclear ribonucleoprotein... 161 5e-038
gi|255629853|gb|ACU15277.1| unknown [Glycine max] 161 6e-038
gi|195615352|gb|ACG29506.1| small nuclear ribonucleoprotein E [Z... 160 8e-038
gi|217071220|gb|ACJ83970.1| unknown [Medicago truncatula] 159 1e-037
>gi|15224217|ref|NP_179464.1| putative small nuclear ribonucleoprotein
[Arabidopsis thaliana]
Length = 88
Score = 174 bits (441), Expect = 4e-042
Identities = 88/88 (100%)
Frame = +2
Query: 38 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 217
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 60
Query: 218 SIKKNTRKPLGRILLKGDNITLMMNTGK 301
SIKKNTRKPLGRILLKGDNITLMMNTGK
Sbjct: 61 SIKKNTRKPLGRILLKGDNITLMMNTGK 88
>gi|18417572|ref|NP_567844.1| small nuclear ribonucleoprotein E [Arabidopsis
thaliana]
Length = 88
Score = 170 bits (430), Expect = 8e-041
Identities = 86/88 (97%)
Frame = +2
Query: 38 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 217
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 60
Query: 218 SIKKNTRKPLGRILLKGDNITLMMNTGK 301
SIKK TRKPLGRILLKGDNITLMMN GK
Sbjct: 61 SIKKKTRKPLGRILLKGDNITLMMNAGK 88
>gi|7269933|emb|CAB81026.1| small nuclear ribonucleoprotein homolog [Arabidopsis
thaliana]
Length = 86
Score = 166 bits (419), Expect = 1e-039
Identities = 84/85 (98%)
Frame = +2
Query: 38 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 217
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 60
Query: 218 SIKKNTRKPLGRILLKGDNITLMMN 292
SIKK TRKPLGRILLKGDNITLMMN
Sbjct: 61 SIKKKTRKPLGRILLKGDNITLMMN 85
>gi|242051601|ref|XP_002454946.1| hypothetical protein SORBIDRAFT_03g001950
[Sorghum bicolor]
Length = 88
Score = 166 bits (419), Expect = 1e-039
Identities = 82/88 (93%), Positives = 86/88 (97%)
Frame = +2
Query: 38 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 217
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRI GFDEYMNLVLD+AEE+
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEI 60
Query: 218 SIKKNTRKPLGRILLKGDNITLMMNTGK 301
++KKNTRK LGRILLKGDNITLMMNTGK
Sbjct: 61 NVKKNTRKSLGRILLKGDNITLMMNTGK 88
>gi|115443949|ref|NP_001045754.1| Os02g0126700 [Oryza sativa Japonica Group]
Length = 88
Score = 166 bits (418), Expect = 2e-039
Identities = 83/88 (94%), Positives = 86/88 (97%)
Frame = +2
Query: 38 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 217
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRI GFDEYMNLVLDEAEE+
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDEAEEI 60
Query: 218 SIKKNTRKPLGRILLKGDNITLMMNTGK 301
+IKK+TRK LGRILLKGDNITLMMNTGK
Sbjct: 61 NIKKDTRKSLGRILLKGDNITLMMNTGK 88
>gi|225455956|ref|XP_002278114.1| PREDICTED: similar to small nuclear
ribonucleoprotein E [Vitis vinifera]
Length = 88
Score = 164 bits (414), Expect = 6e-039
Identities = 81/88 (92%), Positives = 86/88 (97%)
Frame = +2
Query: 38 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 217
MA+TKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRI GFDEYMNLVLD+AEEV
Sbjct: 1 MATTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
Query: 218 SIKKNTRKPLGRILLKGDNITLMMNTGK 301
++KKNT+K LGRILLKGDNITLMMNTGK
Sbjct: 61 NVKKNTKKTLGRILLKGDNITLMMNTGK 88
>gi|255628153|gb|ACU14421.1| unknown [Glycine max]
Length = 88
Score = 164 bits (413), Expect = 7e-039
Identities = 82/88 (93%), Positives = 85/88 (96%)
Frame = +2
Query: 38 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 217
MASTKVQR+MTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRI GFDEYMNLVLD+AEEV
Sbjct: 1 MASTKVQRVMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
Query: 218 SIKKNTRKPLGRILLKGDNITLMMNTGK 301
SIKK +RK LGRILLKGDNITLMMNTGK
Sbjct: 61 SIKKKSRKTLGRILLKGDNITLMMNTGK 88
>gi|168027770|ref|XP_001766402.1| predicted protein [Physcomitrella patens
subsp. patens]
Length = 87
Score = 163 bits (412), Expect = 1e-038
Identities = 81/86 (94%), Positives = 84/86 (97%)
Frame = +2
Query: 44 STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEVSI 223
+TKVQRIMTQPINLIFRFLQSK+RIQIWLFEQKDLRIEGRI GFDEYMNLVLDEAEEVS+
Sbjct: 2 ATKVQRIMTQPINLIFRFLQSKSRIQIWLFEQKDLRIEGRIIGFDEYMNLVLDEAEEVSL 61
Query: 224 KKNTRKPLGRILLKGDNITLMMNTGK 301
KK TRKPLGRILLKGDNITLMMNTGK
Sbjct: 62 KKKTRKPLGRILLKGDNITLMMNTGK 87
>gi|168008828|ref|XP_001757108.1| predicted protein [Physcomitrella patens
subsp. patens]
Length = 87
Score = 163 bits (412), Expect = 1e-038
Identities = 80/86 (93%), Positives = 85/86 (98%)
Frame = +2
Query: 44 STKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEVSI 223
+TKVQRIMTQPINLIFRFLQSK+RIQIWLFEQKD+RIEGRI GFDEYMNLVL+EAEEVS+
Sbjct: 2 ATKVQRIMTQPINLIFRFLQSKSRIQIWLFEQKDMRIEGRIIGFDEYMNLVLEEAEEVSL 61
Query: 224 KKNTRKPLGRILLKGDNITLMMNTGK 301
KKNTRKPLGRILLKGDNITLMMNTGK
Sbjct: 62 KKNTRKPLGRILLKGDNITLMMNTGK 87
>gi|195606896|gb|ACG25278.1| small nuclear ribonucleoprotein E [Zea mays]
Length = 88
Score = 163 bits (411), Expect = 1e-038
Identities = 80/88 (90%), Positives = 86/88 (97%)
Frame = +2
Query: 38 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 217
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRI GFDEYMNLVL++AEE+
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLEDAEEI 60
Query: 218 SIKKNTRKPLGRILLKGDNITLMMNTGK 301
++KKNTRK LGRILLKGDNITLMMN+GK
Sbjct: 61 NVKKNTRKSLGRILLKGDNITLMMNSGK 88
>gi|195638708|gb|ACG38822.1| small nuclear ribonucleoprotein E [Zea mays]
Length = 88
Score = 163 bits (411), Expect = 1e-038
Identities = 80/88 (90%), Positives = 86/88 (97%)
Frame = +2
Query: 38 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 217
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRI GFDEYMNLVL++AEE+
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLEDAEEI 60
Query: 218 SIKKNTRKPLGRILLKGDNITLMMNTGK 301
++KKNTRK LGRILLKGDNITLMMN+GK
Sbjct: 61 NVKKNTRKTLGRILLKGDNITLMMNSGK 88
>gi|255627911|gb|ACU14300.1| unknown [Glycine max]
Length = 88
Score = 163 bits (410), Expect = 2e-038
Identities = 81/88 (92%), Positives = 85/88 (96%)
Frame = +2
Query: 38 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 217
MASTKVQR+MTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRI GFDEYMNLVLD+AEEV
Sbjct: 1 MASTKVQRVMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
Query: 218 SIKKNTRKPLGRILLKGDNITLMMNTGK 301
+IKK +RK LGRILLKGDNITLMMNTGK
Sbjct: 61 NIKKKSRKTLGRILLKGDNITLMMNTGK 88
>gi|282848216|gb|ADB02889.1| small nuclear ribonucleoprotein polypeptide
[Jatropha curcas]
Length = 88
Score = 163 bits (410), Expect = 2e-038
Identities = 81/88 (92%), Positives = 85/88 (96%)
Frame = +2
Query: 38 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 217
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRI GFDEYMNLVLD+AEEV
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
Query: 218 SIKKNTRKPLGRILLKGDNITLMMNTGK 301
++KK TRK LGRILLKGDNITLMMN+GK
Sbjct: 61 NVKKKTRKSLGRILLKGDNITLMMNSGK 88
>gi|224117550|ref|XP_002331664.1| predicted protein [Populus trichocarpa]
Length = 88
Score = 161 bits (407), Expect = 4e-038
Identities = 81/88 (92%), Positives = 85/88 (96%)
Frame = +2
Query: 38 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 217
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRI GFDEYMNLVL++AEEV
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLEDAEEV 60
Query: 218 SIKKNTRKPLGRILLKGDNITLMMNTGK 301
+IKK +RK LGRILLKGDNITLMMNTGK
Sbjct: 61 NIKKKSRKSLGRILLKGDNITLMMNTGK 88
>gi|226529493|ref|NP_001148430.1| small nuclear ribonucleoprotein E [Zea mays]
Length = 88
Score = 161 bits (407), Expect = 4e-038
Identities = 79/88 (89%), Positives = 86/88 (97%)
Frame = +2
Query: 38 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 217
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRI GFDEY+NLVL++AEE+
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYINLVLEDAEEI 60
Query: 218 SIKKNTRKPLGRILLKGDNITLMMNTGK 301
++KKNTRK LGRILLKGDNITLMMN+GK
Sbjct: 61 NVKKNTRKSLGRILLKGDNITLMMNSGK 88
>gi|116779305|gb|ABK21228.1| unknown [Picea sitchensis]
Length = 88
Score = 161 bits (406), Expect = 5e-038
Identities = 78/88 (88%), Positives = 85/88 (96%)
Frame = +2
Query: 38 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 217
MA+T+VQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRI GFDEYMNLVL++AEE+
Sbjct: 1 MATTRVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLEDAEEI 60
Query: 218 SIKKNTRKPLGRILLKGDNITLMMNTGK 301
S+K+ T KPLGRILLKGDNITLMMNTGK
Sbjct: 61 SVKRKTHKPLGRILLKGDNITLMMNTGK 88
>gi|255563612|ref|XP_002522808.1| Small nuclear ribonucleoprotein E, putative
[Ricinus communis]
Length = 88
Score = 161 bits (406), Expect = 5e-038
Identities = 80/88 (90%), Positives = 84/88 (95%)
Frame = +2
Query: 38 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 217
MASTKVQRIMTQPINLIFRFLQSKARIQ WLFEQKDLRIEGRI GFDEYMNLVLD+AEEV
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQFWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
Query: 218 SIKKNTRKPLGRILLKGDNITLMMNTGK 301
++KK +RK LGRILLKGDNITLMMNTGK
Sbjct: 61 NVKKKSRKTLGRILLKGDNITLMMNTGK 88
>gi|255629853|gb|ACU15277.1| unknown [Glycine max]
Length = 88
Score = 161 bits (405), Expect = 6e-038
Identities = 79/88 (89%), Positives = 84/88 (95%)
Frame = +2
Query: 38 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 217
MASTKVQR+MTQPINLIFRFLQ KARIQIWLFEQKDLRIEGRI GFDEYMNLVLD+AEEV
Sbjct: 1 MASTKVQRVMTQPINLIFRFLQGKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
Query: 218 SIKKNTRKPLGRILLKGDNITLMMNTGK 301
++KK +RK LGRILLKGDNITLMMNTGK
Sbjct: 61 NVKKKSRKTLGRILLKGDNITLMMNTGK 88
>gi|195615352|gb|ACG29506.1| small nuclear ribonucleoprotein E [Zea mays]
Length = 88
Score = 160 bits (404), Expect = 8e-038
Identities = 79/88 (89%), Positives = 85/88 (96%)
Frame = +2
Query: 38 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 217
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRI GFDEYMNLVL++AEE+
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLEDAEEI 60
Query: 218 SIKKNTRKPLGRILLKGDNITLMMNTGK 301
++KKNT K LGRILLKGDNITLMMN+GK
Sbjct: 61 NVKKNTPKTLGRILLKGDNITLMMNSGK 88
>gi|217071220|gb|ACJ83970.1| unknown [Medicago truncatula]
Length = 88
Score = 159 bits (402), Expect = 1e-037
Identities = 78/88 (88%), Positives = 84/88 (95%)
Frame = +2
Query: 38 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 217
MASTKVQR+MTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRI GFDEYMNL LD+AEEV
Sbjct: 1 MASTKVQRVMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLALDDAEEV 60
Query: 218 SIKKNTRKPLGRILLKGDNITLMMNTGK 301
++KK ++K LGRILLKGDNITLMMNTGK
Sbjct: 61 NVKKKSKKTLGRILLKGDNITLMMNTGK 88
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,408,156,835,029
Number of Sequences: 15229318
Number of Extensions: 5408156835029
Number of Successful Extensions: 1269931805
Number of sequences better than 0.0: 0
|
