BLASTX 7.6.2
Query= UN50769 /QuerySize=592
(591 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G09012.1 | Symbols: | FUNCTIONS IN: molecular... 155 2e-038
TAIR9_protein||AT5G40080.1 | Symbols: | 60S ribosomal protein-r... 154 6e-038
TAIR9_protein||AT5G39800.1 | Symbols: | 60S ribosomal protein-r... 153 7e-038
>TAIR9_protein||AT4G09012.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; BEST Arabidopsis thaliana protein match is: 60S
ribosomal protein-related (TAIR:AT5G40080.1); Has 124 Blast hits to 124
proteins in 48 species: Archae - 0; Bacteria - 0; Metazoa - 65; Fungi -
23; Plants - 25; Viruses - 0; Other Eukaryotes - 11 (source: NCBI
BLink). | chr4:5780470-5782186 REVERSE
Length = 93
Score = 155 bits (391), Expect = 2e-038
Identities = 77/94 (81%), Positives = 83/94 (88%), Gaps = 1/94 (1%)
Frame = +1
Query: 109 MTLGLLSAIGRSFRRKRASSLDILSPKRAPRNFYKGKNCKSTGFNTSKGGYVVQQDKLPN 288
MTLGLL IGR+FRRKRASSLDILSPKRAPR+FYKGKNCK GF+T K GYVVQ DKLPN
Sbjct: 1 MTLGLLFGIGRTFRRKRASSLDILSPKRAPRDFYKGKNCKPPGFHTRK-GYVVQPDKLPN 59
Query: 289 YVIPDLTGFKLKPCVSQCPVEVNKTTGSTEASK* 390
YV+PDLTGFKLKP VSQCP++VNKT STEASK*
Sbjct: 60 YVVPDLTGFKLKPYVSQCPLDVNKTNESTEASK* 93
>TAIR9_protein||AT5G40080.1 | Symbols: | 60S ribosomal protein-related |
chr5:16040190-16041529 REVERSE
Length = 95
Score = 154 bits (387), Expect = 6e-038
Identities = 76/90 (84%), Positives = 81/90 (90%), Gaps = 1/90 (1%)
Frame = +1
Query: 118 GLLSAIGRSFRRKRASSLDILSPKRAPRNFYKGKNCKSTGFNTSKGGYVVQQDKLPNYVI 297
GLL IGRSFRRKRASSLDILSPKRAPR+FYKGKNCK TGF+T KGGYVVQ DKLPNYV+
Sbjct: 6 GLLMGIGRSFRRKRASSLDILSPKRAPRDFYKGKNCKPTGFHTRKGGYVVQPDKLPNYVV 65
Query: 298 PDLTGFKLKPCVSQCPVEVNKTTGSTEASK 387
PDLTGFKLKP VSQCP++VN T STEASK
Sbjct: 66 PDLTGFKLKPYVSQCPLQVN-TNESTEASK 94
>TAIR9_protein||AT5G39800.1 | Symbols: | 60S ribosomal protein-related |
chr5:15935580-15936936 FORWARD
Length = 95
Score = 153 bits (386), Expect = 7e-038
Identities = 75/90 (83%), Positives = 81/90 (90%), Gaps = 1/90 (1%)
Frame = +1
Query: 118 GLLSAIGRSFRRKRASSLDILSPKRAPRNFYKGKNCKSTGFNTSKGGYVVQQDKLPNYVI 297
GLL IGRSFRRKR+SSLDILSPKRAPR+FYKGKNCK TGF+T KGGYVVQ DKLPNYV+
Sbjct: 6 GLLMGIGRSFRRKRSSSLDILSPKRAPRDFYKGKNCKPTGFHTRKGGYVVQPDKLPNYVV 65
Query: 298 PDLTGFKLKPCVSQCPVEVNKTTGSTEASK 387
PDLTGFKLKP VSQCP++VN T STEASK
Sbjct: 66 PDLTGFKLKPYVSQCPIQVN-TNESTEASK 94
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,087,338,472
Number of Sequences: 33410
Number of Extensions: 24087338472
Number of Successful Extensions: 761288629
Number of sequences better than 0.0: 0
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