Library    |     Search    |     Batch query    |     SNP    |     SSR  

SwissProt blast output of UN50960


BLASTX 7.6.2

Query= UN50960 /QuerySize=1474
        (1473 letters)

Database: UniProt/SwissProt;
          518,415 sequences; 182,829,261 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

sp|Q9FF81|VPS36_ARATH Vacuolar protein sorting-associated protei...     82   9e-015

>sp|Q9FF81|VPS36_ARATH Vacuolar protein sorting-associated protein 36
        OS=Arabidopsis thaliana GN=VPS36 PE=2 SV=1

          Length = 440

 Score =  82 bits (201), Expect = 9e-015
 Identities = 43/46 (93%)
 Frame = +1

Query:  79 VMSRIRTLVTKTETLRTGVTASDAALTLKIAPAMANEHLLSAETKG 216
           VMSRIR LVTKTETLR GVTASDAALTLKIAPAMA EHLLSAETKG
Sbjct: 348 VMSRIRMLVTKTETLRVGVTASDAALTLKIAPAMAKEHLLSAETKG 393


 Score =  57 bits (137), Expect = 2e-007
 Identities = 25/29 (86%), Positives = 26/29 (89%)
 Frame = +3

Query: 297 GLLCRDMSPDGLRFYFNLFHEFDLTNLHL 383
           GLLCRDMSPDGLRFYFNLF E D TNLH+
Sbjct: 393 GLLCRDMSPDGLRFYFNLFPEIDPTNLHI 421

  Database: UniProt/SwissProt
    Posted date:  Sat Aug 07 14:36:18 2010
  Number of letters in database: 182,829,261
  Number of sequences in database:  518,415

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 191,186,815,274
Number of Sequences: 518415
Number of Extensions: 191186815274
Number of Successful Extensions: 1167985300
Number of sequences better than 0.0: 0