BLASTX 7.6.2
Query= UN50991 /QuerySize=748
(747 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G23740.1 | Symbols: RPS11-BETA | RPS11-BETA (R... 312 1e-085
TAIR9_protein||AT3G48930.1 | Symbols: EMB1080 | EMB1080 (embryo ... 309 1e-084
TAIR9_protein||AT4G30800.1 | Symbols: | 40S ribosomal protein S... 302 3e-082
>TAIR9_protein||AT5G23740.1 | Symbols: RPS11-BETA | RPS11-BETA (RIBOSOMAL
PROTEIN S11-BETA); structural constituent of ribosome |
chr5:8008251-8009330 REVERSE
Length = 160
Score = 312 bits (799), Expect = 1e-085
Identities = 151/160 (94%), Positives = 153/160 (95%)
Frame = +3
Query: 69 MAEQTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKNIGLGFKTSREAIDGHYIDKKCP 248
MAEQTEKAFLKQPKVFLSSK SGKGKRPGKGGNRFWKNIGLGFKT REAIDG YID KCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSSKISGKGKRPGKGGNRFWKNIGLGFKTPREAIDGAYIDSKCP 60
Query: 249 LTGTVSVRGRILAGTCHSAKMQRTIIVRRNYLHFVKKYQRYEKRHSNIPAHVSPCFRVKE 428
TGTVS+RGRILAGTCHSAKMQRTIIVRRNYLHFVKKYQRYEKRHSNIPAHVSPCFRVKE
Sbjct: 61 FTGTVSIRGRILAGTCHSAKMQRTIIVRRNYLHFVKKYQRYEKRHSNIPAHVSPCFRVKE 120
Query: 429 GDHVIIGQCRPLSKTVRFNVLKVIPAGASAFAKKAFTGM* 548
GDHVIIGQCRPLSKTVRFNVLKVIPAGASAF KKAFTG+*
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGASAFGKKAFTGV* 160
>TAIR9_protein||AT3G48930.1 | Symbols: EMB1080 | EMB1080 (embryo defective
1080); structural constituent of ribosome | chr3:18141017-18142189
REVERSE
Length = 161
Score = 309 bits (791), Expect = 1e-084
Identities = 149/161 (92%), Positives = 155/161 (96%), Gaps = 1/161 (0%)
Frame = +3
Query: 69 MAEQTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKNIGLGFKTSREAIDGHYIDKKCP 248
MAEQTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKNIGLGFKT REAIDG Y+DKKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKNIGLGFKTPREAIDGAYVDKKCP 60
Query: 249 LTGTVSVRGRILAGTCHSAKMQRTIIVRRNYLHFVKKYQRYEKRHSNIPAHVSPCFRVKE 428
TGTVS+RGRILAGTCHSAKMQRTIIVRR+YLHFVKKYQRYEKRHSNIPAHVSPCFRVKE
Sbjct: 61 FTGTVSIRGRILAGTCHSAKMQRTIIVRRDYLHFVKKYQRYEKRHSNIPAHVSPCFRVKE 120
Query: 429 GDHVIIGQCRPLSKTVRFNVLKVIPAG-ASAFAKKAFTGM* 548
GDH+IIGQCRPLSKTVRFNVLKVIPAG +S+F KKAFTGM*
Sbjct: 121 GDHIIIGQCRPLSKTVRFNVLKVIPAGSSSSFGKKAFTGM* 161
>TAIR9_protein||AT4G30800.1 | Symbols: | 40S ribosomal protein S11 (RPS11B) |
chr4:15001216-15002392 FORWARD
Length = 160
Score = 302 bits (771), Expect = 3e-082
Identities = 144/160 (90%), Positives = 152/160 (95%)
Frame = +3
Query: 69 MAEQTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKNIGLGFKTSREAIDGHYIDKKCP 248
MAEQTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKNIGLGFKT REAI+G YID+KCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKNIGLGFKTPREAIEGTYIDQKCP 60
Query: 249 LTGTVSVRGRILAGTCHSAKMQRTIIVRRNYLHFVKKYQRYEKRHSNIPAHVSPCFRVKE 428
TGTVS+RGRIL+GTCHSAKMQRTIIVRR+YLHFVKKY+RYEKRHSNIPAHVSPCFRVKE
Sbjct: 61 FTGTVSIRGRILSGTCHSAKMQRTIIVRRDYLHFVKKYRRYEKRHSNIPAHVSPCFRVKE 120
Query: 429 GDHVIIGQCRPLSKTVRFNVLKVIPAGASAFAKKAFTGM* 548
GD V IGQCRPLSKTVRFNVLKVIPAG+S+ KKAFTGM*
Sbjct: 121 GDRVTIGQCRPLSKTVRFNVLKVIPAGSSSIGKKAFTGM* 160
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,176,244,688
Number of Sequences: 33410
Number of Extensions: 24176244688
Number of Successful Extensions: 766517080
Number of sequences better than 0.0: 0
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