BLASTX 7.6.2
Query= UN51084 /QuerySize=909
(908 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G11630.1 | Symbols: | ribosomal protein L19 f... 251 7e-067
TAIR9_protein||AT5G11750.1 | Symbols: | ribosomal protein L19 f... 244 6e-065
TAIR9_protein||AT1G24240.1 | Symbols: | ribosomal protein L19 f... 236 2e-062
TAIR9_protein||AT4G17560.1 | Symbols: | ribosomal protein L19 f... 119 3e-027
TAIR9_protein||AT5G47190.1 | Symbols: | ribosomal protein L19 f... 117 9e-027
>TAIR9_protein||AT4G11630.1 | Symbols: | ribosomal protein L19 family protein |
chr4:7019793-7021068 FORWARD
Length = 226
Score = 251 bits (639), Expect = 7e-067
Identities = 131/166 (78%), Positives = 142/166 (85%)
Frame = -3
Query: 699 PSIRQQRHLISSLTKAASFSSALPRQNFAYSSRCFSTVGESVPQGFPVSAPDAPPRIKFK 520
PS R +LISSL A SSA+P+QNF Y+SRCFST G+S QG P S P RIKFK
Sbjct: 47 PSSRAATYLISSLKNAGFSSSAIPKQNFTYASRCFSTTGDSSVQGSPESDCVVPQRIKFK 106
Query: 519 RLDKTAKHIMQIVDKEAVEEVRTSREIPEIRPGYIVQLKVEVPENKRRVSIVKGIVIAGR 340
RLDKTAKHIMQIVDKEAVEEVR+ REIPEI+PGYIVQLKVEVPENKRRVSIVKG+VIA R
Sbjct: 107 RLDKTAKHIMQIVDKEAVEEVRSLREIPEIKPGYIVQLKVEVPENKRRVSIVKGVVIARR 166
Query: 339 NAGLNSTFRIRRLVAGVGVESMFPLYSPNLREIKVLDKKRVKRETL 202
NAGLNSTFRIRRLVAGVGVESMFPLYSPNLREIKV+DKK+V+R L
Sbjct: 167 NAGLNSTFRIRRLVAGVGVESMFPLYSPNLREIKVVDKKKVRRAKL 212
Score = 64 bits (155), Expect = 9e-011
Identities = 42/56 (75%), Positives = 46/56 (82%), Gaps = 5/56 (8%)
Frame = -2
Query: 865 MQSIRSSTRLLQRNRFSISNTLPRFTSSSSSSPSWSDDNESRRLGGGFDSFRSTRA 698
MQSIR STRLLQR+RFSISNTL RFTSSSS SWS +NESR+L GFDS S+RA
Sbjct: 1 MQSIRGSTRLLQRHRFSISNTL-RFTSSSSCG-SWS-ENESRKL--GFDSCPSSRA 51
>TAIR9_protein||AT5G11750.1 | Symbols: | ribosomal protein L19 family protein |
chr5:3787343-3788926 FORWARD
Length = 230
Score = 244 bits (622), Expect = 6e-065
Identities = 130/169 (76%), Positives = 140/169 (82%), Gaps = 3/169 (1%)
Frame = -3
Query: 699 PSIRQQRHLISSLTKAASFSSALPRQNFAYSSRCFSTVGESV---PQGFPVSAPDAPPRI 529
P R +LISSL SSA+P+Q+F YS RCFST G+SV PQG P S P RI
Sbjct: 48 PCTRAATYLISSLKNVGFSSSAIPKQDFKYSLRCFSTTGDSVQSTPQGSPESDCVVPQRI 107
Query: 528 KFKRLDKTAKHIMQIVDKEAVEEVRTSREIPEIRPGYIVQLKVEVPENKRRVSIVKGIVI 349
KFKRLDKTAKHIMQIVDKEAVEEVR REIPEI+PGYIVQLKVEVPENKRRVSIVKG+VI
Sbjct: 108 KFKRLDKTAKHIMQIVDKEAVEEVRNLREIPEIKPGYIVQLKVEVPENKRRVSIVKGVVI 167
Query: 348 AGRNAGLNSTFRIRRLVAGVGVESMFPLYSPNLREIKVLDKKRVKRETL 202
A RNAGLNSTFRIRRLVAGVGVESMFPLYSPNLREIKV+DKK+V+R L
Sbjct: 168 ARRNAGLNSTFRIRRLVAGVGVESMFPLYSPNLREIKVVDKKKVRRAKL 216
Score = 74 bits (179), Expect = 1e-013
Identities = 45/56 (80%), Positives = 48/56 (85%), Gaps = 4/56 (7%)
Frame = -2
Query: 865 MQSIRSSTRLLQRNRFSISNTLPRFTSSSSSSPSWSDDNESRRLGGGFDSFRSTRA 698
MQSIRSSTRLLQR+RFSISNTL RFTSSSSSS SWS +NESR + GFDSF TRA
Sbjct: 1 MQSIRSSTRLLQRHRFSISNTL-RFTSSSSSSGSWS-ENESRMV--GFDSFPCTRA 52
>TAIR9_protein||AT1G24240.1 | Symbols: | ribosomal protein L19 family protein |
chr1:8586431-8587970 FORWARD
Length = 223
Score = 236 bits (600), Expect = 2e-062
Identities = 133/168 (79%), Positives = 142/168 (84%), Gaps = 6/168 (3%)
Frame = -3
Query: 699 PSIRQQRHLISSLTKAASFSS--ALPRQNFAYSSRCFSTVGESVPQGFPVSAPDAPPRIK 526
PS R +LISSL K A FSS +P+QNF SSRCFST G+SV QG P S P RIK
Sbjct: 46 PSTRAATYLISSL-KNAGFSSLAVVPKQNF--SSRCFSTTGDSV-QGSPESDCVVPQRIK 101
Query: 525 FKRLDKTAKHIMQIVDKEAVEEVRTSREIPEIRPGYIVQLKVEVPENKRRVSIVKGIVIA 346
FKRLDKTAKHIMQIVDKEAVEEVRT REIPEI+PGYIVQLKVEVPENKRRVSIVKG+VIA
Sbjct: 102 FKRLDKTAKHIMQIVDKEAVEEVRTLREIPEIKPGYIVQLKVEVPENKRRVSIVKGVVIA 161
Query: 345 GRNAGLNSTFRIRRLVAGVGVESMFPLYSPNLREIKVLDKKRVKRETL 202
RNAGLNSTFRIRRLVAGVGVESMFPLYSPNLR IKV+DKK+V+R L
Sbjct: 162 RRNAGLNSTFRIRRLVAGVGVESMFPLYSPNLRVIKVVDKKKVRRAKL 209
Score = 64 bits (154), Expect = 1e-010
Identities = 42/56 (75%), Positives = 44/56 (78%), Gaps = 6/56 (10%)
Frame = -2
Query: 865 MQSIRSSTRLLQRNRFSISNTLPRFTSSSSSSPSWSDDNESRRLGGGFDSFRSTRA 698
MQ IR STRLLQR+RFSISNTLP FTSSS SWS NESR+L GFDSF STRA
Sbjct: 1 MQLIRGSTRLLQRHRFSISNTLP-FTSSSCG--SWS-ANESRKL--GFDSFPSTRA 50
>TAIR9_protein||AT4G17560.1 | Symbols: | ribosomal protein L19 family protein |
chr4:9780343-9781752 FORWARD
Length = 226
Score = 119 bits (297), Expect = 3e-027
Identities = 58/116 (50%), Positives = 86/116 (74%), Gaps = 7/116 (6%)
Frame = -3
Query: 549 PDAPPRIKFKRLDKTAKHIMQIVDKEAVEEVRTSREIPEIRPGYIVQLKVEVPENKRRVS 370
P PRIK +M I++++A+E R +PEIR G IV++K+EVPENKRR+S
Sbjct: 103 PTRKPRIKL-------GDVMGILNQKAIEVAEKVRPVPEIRTGDIVEIKLEVPENKRRLS 155
Query: 369 IVKGIVIAGRNAGLNSTFRIRRLVAGVGVESMFPLYSPNLREIKVLDKKRVKRETL 202
I KGIV++ +NAG+++T RIRR++AG+GVE +FP+YSPN++EIKV+ ++V+R L
Sbjct: 156 IYKGIVMSRQNAGIHTTIRIRRIIAGIGVEIVFPIYSPNIKEIKVVSHRKVRRARL 211
>TAIR9_protein||AT5G47190.1 | Symbols: | ribosomal protein L19 family protein |
chr5:19164432-19166064 REVERSE
Length = 230
Score = 117 bits (293), Expect = 9e-027
Identities = 53/98 (54%), Positives = 81/98 (82%)
Frame = -3
Query: 495 IMQIVDKEAVEEVRTSREIPEIRPGYIVQLKVEVPENKRRVSIVKGIVIAGRNAGLNSTF 316
IM +++K+A+E T R +P +R G IV++K+EVPENKRR+SI KGIV++ +NAG+++T
Sbjct: 118 IMGLLNKKAIEVAETVRPVPGLRTGDIVEIKLEVPENKRRLSIYKGIVMSRQNAGIHTTI 177
Query: 315 RIRRLVAGVGVESMFPLYSPNLREIKVLDKKRVKRETL 202
RIRR++AG+GVE +FP+YSPN++EIKV+ ++V+R L
Sbjct: 178 RIRRIIAGIGVEIVFPIYSPNIKEIKVVSHRKVRRARL 215
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,176,244,688
Number of Sequences: 33410
Number of Extensions: 24176244688
Number of Successful Extensions: 766517080
Number of sequences better than 0.0: 0
|
