BLASTX 7.6.2
Query= UN51294 /QuerySize=1258
(1257 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297833862|ref|XP_002884813.1| nucleic acid binding protein [A... 545 7e-153
gi|18398995|ref|NP_566381.1| Single-stranded nucleic acid bindin... 538 1e-150
gi|21592735|gb|AAM64684.1| unknown [Arabidopsis thaliana] 535 1e-149
gi|30681485|ref|NP_850556.1| Single-stranded nucleic acid bindin... 515 1e-143
gi|18414788|ref|NP_568149.1| Single-stranded nucleic acid bindin... 409 8e-112
gi|10178049|dbj|BAB11532.1| unnamed protein product [Arabidopsis... 406 4e-111
gi|297810619|ref|XP_002873193.1| nucleic acid binding protein [A... 406 7e-111
gi|225440145|ref|XP_002283240.1| PREDICTED: hypothetical protein... 296 8e-078
gi|255561144|ref|XP_002521584.1| r3h domain containing protein, ... 271 3e-070
gi|297824031|ref|XP_002879898.1| hypothetical protein ARALYDRAFT... 271 3e-070
gi|21592404|gb|AAM64355.1| unknown [Arabidopsis thaliana] 263 7e-068
gi|124361205|gb|ABN09177.1| Single-stranded nucleic acid binding... 262 1e-067
gi|18405560|ref|NP_565947.1| Single-stranded nucleic acid bindin... 261 2e-067
gi|255636099|gb|ACU18394.1| unknown [Glycine max] 255 1e-065
gi|224086775|ref|XP_002307959.1| predicted protein [Populus tric... 240 6e-061
gi|224137642|ref|XP_002322608.1| predicted protein [Populus tric... 229 9e-058
gi|255552461|ref|XP_002517274.1| r3h domain containing protein, ... 220 4e-055
gi|297801050|ref|XP_002868409.1| predicted protein [Arabidopsis ... 127 6e-027
gi|297793247|ref|XP_002864508.1| predicted protein [Arabidopsis ... 126 1e-026
gi|297851200|ref|XP_002893481.1| predicted protein [Arabidopsis ... 124 3e-026
>gi|297833862|ref|XP_002884813.1| nucleic acid binding protein [Arabidopsis
lyrata subsp. lyrata]
Length = 333
Score = 545 bits (1403), Expect = 7e-153
Identities = 279/337 (82%), Positives = 295/337 (87%), Gaps = 19/337 (5%)
Frame = -1
Query: 1140 AAMTEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPDQLQFEFQPFPTSYLRLAA 961
AAMTEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNP+QLQFEF+PFPTSYLRLAA
Sbjct: 2 AAMTEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPEQLQFEFRPFPTSYLRLAA 61
Query: 960 HRVAQHYGLVTMSLENGNGALDGSDNRILVTKTAESRFPSVCLSEIPVKQPENGRPEGFK 781
HRVAQHYGLVTM+L+NG GA DGS+NRILVTKTAESRFP VCLSEIPVKQPENGRPEGFK
Sbjct: 62 HRVAQHYGLVTMALDNGTGAGDGSENRILVTKTAESRFPYVCLSEIPVKQPENGRPEGFK 121
Query: 780 IAIKARPKRGSGSGGSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDSEDSSSLLRA 601
IAIK RPKRGSG GGSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDSEDSSSL
Sbjct: 122 IAIKPRPKRGSGCGGSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDSEDSSSL--- 178
Query: 600 PPPPPPLE----GVNRNETEVAVSNSSVDA----GSRTSRVAIIRDREKDRYDPDYDRSY 445
PPPLE +NRNETEVAV+N VDA RTSRVAIIRDREKDRYDPDYDRSY
Sbjct: 179 --RPPPLEVKNTCINRNETEVAVNNDPVDAVTRDSGRTSRVAIIRDREKDRYDPDYDRSY 236
Query: 444 ERYVVDPSYRYVRVMSPGQGFSPMPMHIPFHDGGFPQIPRGPQANLNYGH---PAMSPFV 274
+RYVVDP+YRYVRVM GQ FSP+P+HIPFHDG FPQ+PRG QANLNYGH PA+SPF
Sbjct: 237 DRYVVDPAYRYVRVMPSGQSFSPIPIHIPFHDGVFPQMPRGHQANLNYGHPLNPALSPFT 296
Query: 273 NNPAAYTPWPNLPSMNYVQSLNRPD---FRHPSASNP 172
+N A+YTPWPN P+MNY Q LN D FRHPSASNP
Sbjct: 297 HNAASYTPWPNSPAMNYAQPLNGSDTNLFRHPSASNP 333
>gi|18398995|ref|NP_566381.1| Single-stranded nucleic acid binding R3H protein
[Arabidopsis thaliana]
Length = 333
Score = 538 bits (1384), Expect = 1e-150
Identities = 277/337 (82%), Positives = 292/337 (86%), Gaps = 19/337 (5%)
Frame = -1
Query: 1140 AAMTEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPDQLQFEFQPFPTSYLRLAA 961
A+MTEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNP+QLQFEF PFPTSYLRLAA
Sbjct: 2 ASMTEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPEQLQFEFPPFPTSYLRLAA 61
Query: 960 HRVAQHYGLVTMSLENGNGALDGSDNRILVTKTAESRFPSVCLSEIPVKQPENGRPEGFK 781
HRVAQHYGLVTM+L+NG GA DGSDNRILVTKTAESRFP VCLSEIPVKQPENGRPEGFK
Sbjct: 62 HRVAQHYGLVTMALDNGTGAGDGSDNRILVTKTAESRFPYVCLSEIPVKQPENGRPEGFK 121
Query: 780 IAIKARPKRGSGSGGSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDSEDSSSLLRA 601
IAIK RPKRGSG GGSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDSEDSSSL
Sbjct: 122 IAIKPRPKRGSGCGGSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDSEDSSSL--- 178
Query: 600 PPPPPPLE----GVNRNETEVAVSNSSVDA----GSRTSRVAIIRDREKDRYDPDYDRSY 445
PP LE +NRNETEVAV+NS VDA RTSRVAIIRDREKDRYDPDYDRSY
Sbjct: 179 --RPPSLEVRNTCINRNETEVAVNNSPVDAVTRDSGRTSRVAIIRDREKDRYDPDYDRSY 236
Query: 444 ERYVVDPSYRYVRVMSPGQGFSPMPMHIPFHDGGFPQIPRGPQANLNYGH---PAMSPFV 274
+RYVVDP+YRYVRVM GQ FSPMP+HIPFHDG FP +PRG QANLNYGH PA+SPF
Sbjct: 237 DRYVVDPAYRYVRVMPSGQSFSPMPIHIPFHDGFFPHMPRGHQANLNYGHPLNPALSPFT 296
Query: 273 NNPAAYTPWPNLPSMNYVQSLNRPD---FRHPSASNP 172
+N A+YTPWPN P MNY Q LN D +R+PSASNP
Sbjct: 297 HNVASYTPWPNSPVMNYAQPLNGSDTNLYRYPSASNP 333
>gi|21592735|gb|AAM64684.1| unknown [Arabidopsis thaliana]
Length = 333
Score = 535 bits (1376), Expect = 1e-149
Identities = 275/337 (81%), Positives = 291/337 (86%), Gaps = 19/337 (5%)
Frame = -1
Query: 1140 AAMTEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPDQLQFEFQPFPTSYLRLAA 961
A+MTEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNP+QLQFEF PFPTSYLRLAA
Sbjct: 2 ASMTEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPEQLQFEFPPFPTSYLRLAA 61
Query: 960 HRVAQHYGLVTMSLENGNGALDGSDNRILVTKTAESRFPSVCLSEIPVKQPENGRPEGFK 781
HRVAQHYGLVTM+L+NG G DGSDNRILVTKTAESRFP VCLSEIPVKQPENGRPEGFK
Sbjct: 62 HRVAQHYGLVTMALDNGTGTGDGSDNRILVTKTAESRFPYVCLSEIPVKQPENGRPEGFK 121
Query: 780 IAIKARPKRGSGSGGSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDSEDSSSLLRA 601
IAIK RPKRGSG GGSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDSEDSSSL
Sbjct: 122 IAIKPRPKRGSGCGGSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDSEDSSSL--- 178
Query: 600 PPPPPPLE----GVNRNETEVAVSNSSVDA----GSRTSRVAIIRDREKDRYDPDYDRSY 445
PP LE +NRNETEVAV+NS VDA RTSRVAIIRDREK+RYDPDYDRSY
Sbjct: 179 --RPPSLEVKNTCINRNETEVAVNNSPVDAVTRDSGRTSRVAIIRDREKERYDPDYDRSY 236
Query: 444 ERYVVDPSYRYVRVMSPGQGFSPMPMHIPFHDGGFPQIPRGPQANLNYGH---PAMSPFV 274
+RYVVDP+YRYVRVM GQ FSPMP+HIPFHDG FP +PRG QANLNYGH PA+SPF
Sbjct: 237 DRYVVDPAYRYVRVMPSGQSFSPMPIHIPFHDGFFPHMPRGHQANLNYGHPLNPALSPFT 296
Query: 273 NNPAAYTPWPNLPSMNYVQSLNRPD---FRHPSASNP 172
+N A+YTPWPN P MNY Q LN D +R+PSASNP
Sbjct: 297 HNVASYTPWPNSPVMNYAQPLNGSDTNLYRYPSASNP 333
>gi|30681485|ref|NP_850556.1| Single-stranded nucleic acid binding R3H protein
[Arabidopsis thaliana]
Length = 325
Score = 515 bits (1324), Expect = 1e-143
Identities = 270/337 (80%), Positives = 284/337 (84%), Gaps = 27/337 (8%)
Frame = -1
Query: 1140 AAMTEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPDQLQFEFQPFPTSYLRLAA 961
A+MTEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNP+QLQFEF PFPTSYLRLAA
Sbjct: 2 ASMTEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPEQLQFEFPPFPTSYLRLAA 61
Query: 960 HRVAQHYGLVTMSLENGNGALDGSDNRILVTKTAESRFPSVCLSEIPVKQPENGRPEGFK 781
HRVAQHYGLVTM+L+NG GA DGSDNRILVTKTAESRFP VCLSEIPVKQPENGRPEGFK
Sbjct: 62 HRVAQHYGLVTMALDNGTGAGDGSDNRILVTKTAESRFPYVCLSEIPVKQPENGRPEGFK 121
Query: 780 IAIKARPKRGSGSGGSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDSEDSSSLLRA 601
IAIK RPKRGSG GGSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDSEDSSSL
Sbjct: 122 IAIKPRPKRGSGCGGSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDSEDSSSL--- 178
Query: 600 PPPPPPLE----GVNRNETEVAVSNSSVDA----GSRTSRVAIIRDREKDRYDPDYDRSY 445
PP LE +NRNETEVAV+NS VDA RTSRVAIIRDREKDRYDPDYDRSY
Sbjct: 179 --RPPSLEVRNTCINRNETEVAVNNSPVDAVTRDSGRTSRVAIIRDREKDRYDPDYDRSY 236
Query: 444 ERYVVDPSYRYVRVMSPGQGFSPMPMHIPFHDGGFPQIPRGPQANLNYGH---PAMSPFV 274
+ RYVRVM GQ FSPMP+HIPFHDG FP +PRG QANLNYGH PA+SPF
Sbjct: 237 D--------RYVRVMPSGQSFSPMPIHIPFHDGFFPHMPRGHQANLNYGHPLNPALSPFT 288
Query: 273 NNPAAYTPWPNLPSMNYVQSLNRPD---FRHPSASNP 172
+N A+YTPWPN P MNY Q LN D +R+PSASNP
Sbjct: 289 HNVASYTPWPNSPVMNYAQPLNGSDTNLYRYPSASNP 325
>gi|18414788|ref|NP_568149.1| Single-stranded nucleic acid binding R3H protein
[Arabidopsis thaliana]
Length = 324
Score = 409 bits (1049), Expect = 8e-112
Identities = 227/340 (66%), Positives = 259/340 (76%), Gaps = 39/340 (11%)
Frame = -1
Query: 1140 AAMTEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPDQLQFEFQPFPTSYLRLAA 961
AAM++KEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQ+P+Q Q+EFQP PTSYLRL A
Sbjct: 2 AAMSDKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQSPEQQQYEFQPLPTSYLRLIA 61
Query: 960 HRVAQHYGLVTMSLENGNGALDGSDNRILVTKTAESRFPSVCLSEIPVKQPE-NGRPEGF 784
HRVAQHYGL T +LE G +DGS NRIL TKT ESR+P VCLSEIPVKQPE +GRPEGF
Sbjct: 62 HRVAQHYGLFTTALE--GGGVDGSGNRILATKTVESRYPYVCLSEIPVKQPEIHGRPEGF 119
Query: 783 KIAIKARPKRGSGSGGSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDSEDSSSLLR 604
KIAIK RP RG+G GSGSGV++NLLRSVEERKEEYDKARARIFNSPSSSDSEDSS+ R
Sbjct: 120 KIAIKPRPNRGAGGSGSGSGVEKNLLRSVEERKEEYDKARARIFNSPSSSDSEDSST--R 177
Query: 603 APPPP-PPLEG------VNRNETEVAVS----------NSSVDAGSRTSRVAIIRDREKD 475
APPPP P L+ +RNETEV V+ N + RTSRVAIIRDREKD
Sbjct: 178 APPPPYPRLDSKHNTACPSRNETEVVVNYNSNPVDVERNGVIRDSGRTSRVAIIRDREKD 237
Query: 474 RYDPDYDRSYERYVVDPSYRYVRVMSPGQGFSPMPMHIPFHDGGFPQIPRGPQANLNYGH 295
RYDPDYDR+ RYVRV P Q F+P+P+ +PFHD FPQ+PR QA+LNYGH
Sbjct: 238 RYDPDYDRN----------RYVRVAPPVQNFNPIPIPLPFHDAIFPQMPR-TQASLNYGH 286
Query: 294 PAMSPFVNNPAAYTPWPNLPSMNYVQSLNRPD---FRHPS 184
P ++P + P +YT WP+ +M Y Q+LN D FRHP+
Sbjct: 287 P-LNPAMTAP-SYTEWPS-ATMTYAQTLNASDVHHFRHPN 323
>gi|10178049|dbj|BAB11532.1| unnamed protein product [Arabidopsis thaliana]
Length = 343
Score = 406 bits (1043), Expect = 4e-111
Identities = 224/335 (66%), Positives = 255/335 (76%), Gaps = 36/335 (10%)
Frame = -1
Query: 1140 AAMTEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPDQLQFEFQPFPTSYLRLAA 961
AAM++KEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQ+P+Q Q+EFQP PTSYLRL A
Sbjct: 2 AAMSDKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQSPEQQQYEFQPLPTSYLRLIA 61
Query: 960 HRVAQHYGLVTMSLENGNGALDGSDNRILVTKTAESRFPSVCLSEIPVKQPE-NGRPEGF 784
HRVAQHYGL T +LE G +DGS NRIL TKT ESR+P VCLSEIPVKQPE +GRPEGF
Sbjct: 62 HRVAQHYGLFTTALE--GGGVDGSGNRILATKTVESRYPYVCLSEIPVKQPEIHGRPEGF 119
Query: 783 KIAIKARPKRGSGSGGSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDSEDSSSLLR 604
KIAIK RP RG+G GSGSGV++NLLRSVEERKEEYDKARARIFNSPSSSDSEDSS+ R
Sbjct: 120 KIAIKPRPNRGAGGSGSGSGVEKNLLRSVEERKEEYDKARARIFNSPSSSDSEDSST--R 177
Query: 603 APPPP-PPLEG------VNRNETEVAVS----------NSSVDAGSRTSRVAIIRDREKD 475
APPPP P L+ +RNETEV V+ N + RTSRVAIIRDREKD
Sbjct: 178 APPPPYPRLDSKHNTACPSRNETEVVVNYNSNPVDVERNGVIRDSGRTSRVAIIRDREKD 237
Query: 474 RYDPDYDRSYERYVVDPSYRYVRVMSPGQGFSPMPMHIPFHDGGFPQIPRGPQANLNYGH 295
RYDPDYDR+ RYVRV P Q F+P+P+ +PFHD FPQ+PR QA+LNYGH
Sbjct: 238 RYDPDYDRN----------RYVRVAPPVQNFNPIPIPLPFHDAIFPQMPR-TQASLNYGH 286
Query: 294 PAMSPFVNNPAAYTPWPNLPSMNYVQSLNRPDFRH 190
P ++P + P +YT WP+ +M Y Q+LN D H
Sbjct: 287 P-LNPAMTAP-SYTEWPS-ATMTYAQTLNASDVHH 318
>gi|297810619|ref|XP_002873193.1| nucleic acid binding protein [Arabidopsis
lyrata subsp. lyrata]
Length = 324
Score = 406 bits (1041), Expect = 7e-111
Identities = 225/340 (66%), Positives = 262/340 (77%), Gaps = 39/340 (11%)
Frame = -1
Query: 1140 AAMTEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPDQLQFEFQPFPTSYLRLAA 961
AAM++KEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQ+P+Q Q+EFQP PTSYLRL A
Sbjct: 2 AAMSDKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQSPEQQQYEFQPLPTSYLRLIA 61
Query: 960 HRVAQHYGLVTMSLENGNGALDGSDNRILVTKTAESRFPSVCLSEIPVKQPE-NGRPEGF 784
HRVAQHYGL T +L+ G +DGS NRIL TKTAESR+P VCLSEIPVKQPE +G+PEGF
Sbjct: 62 HRVAQHYGLFTTALD--GGGVDGSGNRILATKTAESRYPYVCLSEIPVKQPEIHGKPEGF 119
Query: 783 KIAIKARPKRGSGSGGSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDSEDSSSLLR 604
KIAIK RP RGSG GSGSGV++NLLRSVEERKEEYD+ARARIFNSPSSSDSEDSS+ R
Sbjct: 120 KIAIKPRPNRGSGGSGSGSGVEKNLLRSVEERKEEYDRARARIFNSPSSSDSEDSST--R 177
Query: 603 APPPPPP-LEG------VNRNETEVAVSNSS--VDA--------GSRTSRVAIIRDREKD 475
APPPPPP L+ +RNE+EV ++++S VD RTSRVAIIRDREKD
Sbjct: 178 APPPPPPRLDSKHNSTCPSRNESEVVINHNSNPVDVERNGVFRDSGRTSRVAIIRDREKD 237
Query: 474 RYDPDYDRSYERYVVDPSYRYVRVMSPGQGFSPMPMHIPFHDGGFPQIPRGPQANLNYGH 295
RYDPDYDR+ RYVRV P Q F+P+P+ + FHD FPQ PR QA++NYGH
Sbjct: 238 RYDPDYDRN----------RYVRVAPPVQNFNPIPIPLQFHDAIFPQTPR-TQASINYGH 286
Query: 294 PAMSPFVNNPAAYTPWPNLPSMNYVQSLNRPD---FRHPS 184
P ++P + P +YT WP+ +M Y Q+LN D FRHP+
Sbjct: 287 P-LNPAMTAP-SYTEWPS-ATMTYAQTLNASDTHHFRHPN 323
>gi|225440145|ref|XP_002283240.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 356
Score = 296 bits (756), Expect = 8e-078
Identities = 180/347 (51%), Positives = 222/347 (63%), Gaps = 50/347 (14%)
Frame = -1
Query: 1143 AAAMTEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPDQLQFEFQPFPTSYLRLA 964
+A +KE+MVDPFLVEALQNPRHRLTILRMELDIQ+F QNPDQ QFEFQ FPTSYLRLA
Sbjct: 11 SATPGDKESMVDPFLVEALQNPRHRLTILRMELDIQRFLQNPDQQQFEFQHFPTSYLRLA 70
Query: 963 AHRVAQHYGLVTMSLENGNGALDGSDNRILVTKTAESRFPSVCLSEIPVKQPENGRPEGF 784
AHRVA HYGL TM +N ++DG NRI+V KTAESR P++CLSEIP KQ EN +PE
Sbjct: 71 AHRVALHYGLQTMVQDN---SVDGLANRIVVMKTAESRCPAICLSEIPAKQSENEKPEHI 127
Query: 783 KIAIKARPKRGSGSGGSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDSEDSSSLLR 604
KIAI+ RP + S + + +G++++ +R+VEERKEEYDKARARIF++P+S DS+D+
Sbjct: 128 KIAIRRRPNKTSLNETNETGIKRSSVRTVEERKEEYDKARARIFSTPASPDSDDTL---- 183
Query: 603 APPPPPPLEGVN-----------RNETEVAVSNSSVDAGSRTSRVAIIRDREKDRYDPDY 457
P P +G N RN N S+ +SRVAI RDREKDR DPDY
Sbjct: 184 ---PQAPADGKNLCLNGDENEGCRNSMADPEKNISIRDSGTSSRVAIFRDREKDRTDPDY 240
Query: 456 DRSYERYVVDPSYRYVRVMSPGQGFSPMP-----MHIPF--HDGGFPQIP--RGPQANLN 304
DRSYE RYVR + Q FS P + PF +D GFPQ+ + QA+L+
Sbjct: 241 DRSYE--------RYVRNLPTNQSFSLAPFDAQKIQHPFLQYDTGFPQLGQIQRTQASLS 292
Query: 303 Y--GHPAMSPF-------VNNPAAYTPWPNLPSMNYVQSLNRPDFRH 190
Y +P M+PF + A Y WP+ SM Y S + FRH
Sbjct: 293 YRPSNPIMNPFCAMGLNQTSRDAVYLQWPS-HSMMYAHSYEQ--FRH 336
>gi|255561144|ref|XP_002521584.1| r3h domain containing protein, putative
[Ricinus communis]
Length = 349
Score = 271 bits (691), Expect = 3e-070
Identities = 160/297 (53%), Positives = 199/297 (67%), Gaps = 16/297 (5%)
Frame = -1
Query: 1137 AMTEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPDQLQFEFQPFPTSYLRLAAH 958
A+T+KE+MVDPFLVEALQNPRHRLTILRMELDIQ+F QNP Q QFEFQ FPTSYLRLAAH
Sbjct: 6 AITDKESMVDPFLVEALQNPRHRLTILRMELDIQRFLQNPVQQQFEFQHFPTSYLRLAAH 65
Query: 957 RVAQHYGLVTMSLENGNGALDGSDNRILVTKTAESRFPSVCLSEIPVKQPENGRPEGFKI 778
RVAQHYGL+TM +N + DG N+ILV KTAE R+P+V L EIP KQ E+ + E KI
Sbjct: 66 RVAQHYGLITMVQDN---SFDGLVNKILVKKTAEIRYPAVRLCEIPAKQWESDKSEQVKI 122
Query: 777 AIKARPKRGSGSGGSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDSED---SSSLL 607
I+ RP +GS + + GV+Q+ +RSVEERKEEYD+ARARIF+SPSS++ +D S+
Sbjct: 123 VIRPRPNKGSTNEFNEFGVKQDPVRSVEERKEEYDRARARIFSSPSSTNLDDVVSQGSID 182
Query: 606 RAPPPPPPLEGVNRNETEVAVSNSSVDAGSRTSRVAIIRDREKDRYDPDYDRSYERYVVD 427
R P E N + + SRVAI RDREKDR DPDYDRSY+RY+
Sbjct: 183 RKSTNPSKDELENCRYSANDPEKNINPRDGAPSRVAIFRDREKDRTDPDYDRSYDRYIRS 242
Query: 426 PSYRYVRVMSPGQGFSPMPMHIPF--HDGGFPQIPRGP--QANLNY---GHPAMSPF 277
++P + + +PF +D GFPQ+ + P Q +L+Y P MSPF
Sbjct: 243 LPTNQSFNLAP---LNMQKIQLPFIPYDTGFPQLGQMPRTQNSLSYQPAASPVMSPF 296
>gi|297824031|ref|XP_002879898.1| hypothetical protein ARALYDRAFT_483163
[Arabidopsis lyrata subsp. lyrata]
Length = 355
Score = 271 bits (691), Expect = 3e-070
Identities = 165/330 (50%), Positives = 204/330 (61%), Gaps = 37/330 (11%)
Frame = -1
Query: 1134 MTEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPDQLQFEFQPFPTSYLRLAAHR 955
M +K VDPFLVEALQNPRHR TILRMELDIQ+FFQ+PDQ FEFQ FPTSYLRLAAHR
Sbjct: 14 MADKGFTVDPFLVEALQNPRHRPTILRMELDIQRFFQSPDQQLFEFQQFPTSYLRLAAHR 73
Query: 954 VAQHYGLVTMSLENGNGALDGSDNRILVTKTAESRFPSVCLSEIPVKQPENGRPEGFKIA 775
VA HYGL+T + G DG+ +RI+VTK+ ESRFP+V LSEIP KQ E G+ E K+A
Sbjct: 74 VANHYGLITSVRD---GGADGNGSRIVVTKSTESRFPAVRLSEIPAKQSEIGKFEHMKVA 130
Query: 774 IKARPKRGSGSGGSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDSEDSSSLLRAPP 595
IK RP +GSG + L +SVEERKE+YD+ARARIFN + D DSSS
Sbjct: 131 IKPRPSKGSGMEAGELEKKGGLPKSVEERKEDYDRARARIFNGLADLDCNDSSS---ETN 187
Query: 594 PPPPLEGVNRNETEVAVSNSSVDA--------GSRTSRVAIIRDREKDRYDPDYDRSYER 439
P +R+E +V + N +++A + TSR+AI+RDREKDRYDPDYD SY+R
Sbjct: 188 PWSVKCSPSRDENQV-LKNGNIEADKNHIPRESNPTSRIAILRDREKDRYDPDYDHSYDR 246
Query: 438 YV----VDPSYRYVRVMSPGQGFSPMPMHIPFHDGGFPQIPRGPQ--ANLNYG-HPAMSP 280
Y+ VD ++ F+ M P +D GF + P A+L G H MSP
Sbjct: 247 YIRNLPVDQNFCLAH-------FNSQEMGTPIYDLGFSGYSQNPSGAASLKLGQHSVMSP 299
Query: 279 FV----NNP----AAYTPWPNLPSMNYVQS 214
+V N P A Y WPN ++ Y S
Sbjct: 300 YVTTGLNQPSMDAAMYMQWPNAAAVMYTHS 329
>gi|21592404|gb|AAM64355.1| unknown [Arabidopsis thaliana]
Length = 351
Score = 263 bits (670), Expect = 7e-068
Identities = 161/323 (49%), Positives = 199/323 (61%), Gaps = 23/323 (7%)
Frame = -1
Query: 1140 AAMTEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPDQLQFEFQPFPTSYLRLAA 961
A + +K VDPFLVEALQNPRHRLTILRMELD+Q+F Q+PDQ QFEFQ FPTSYLRLAA
Sbjct: 12 AVIADKGFNVDPFLVEALQNPRHRLTILRMELDVQRFLQSPDQQQFEFQHFPTSYLRLAA 71
Query: 960 HRVAQHYGLVTMSLENGNGALDGSDNRILVTKTAESRFPSVCLSEIPVKQPENGRPEGFK 781
HRVA HYGL+T + G DG+++RI+VTK+++SRFP+ LSEIPVKQ E G+ E K
Sbjct: 72 HRVANHYGLITSVRD---GGADGNESRIVVTKSSDSRFPAARLSEIPVKQSETGKFEHMK 128
Query: 780 IAIKARPKRGSGSGGSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDSEDSSSLLRA 601
+ IK RP +GSG G ++ LL+SVEERKE+YD+ARARIFN + D DSSS
Sbjct: 129 VVIKPRPTKGSGM--EGDELKGGLLKSVEERKEDYDRARARIFNGLVNIDCNDSSSETNP 186
Query: 600 ----PPPPPPLEGVNRNETEVAVSNSSVDAGSRTSRVAIIRDREKDRYDPDYDRSYERYV 433
V +N A N+ + SR+AI+RDREKDRYDPDYDRS RY+
Sbjct: 187 WRVNCSSSRDENQVLKNGNIEADKNNISRKSNPASRIAILRDREKDRYDPDYDRSNYRYI 246
Query: 432 VD-PSYRYVRVMSPGQGFSPMPMHIPFHDGGFPQIPRGPQANLNYG-HPAMSPFV----N 271
+ P + + V F+ M P +D GF +LN G H MSP V N
Sbjct: 247 SNLPVDQNLCVAH----FNIQTMGTPIYDMGFRGYSPTAPPSLNLGQHSVMSPCVTTGLN 302
Query: 270 NP----AAYTPWPNLPSMNYVQS 214
P A Y WPN ++ Y S
Sbjct: 303 QPSRDAAMYMQWPNAAAVMYTHS 325
>gi|124361205|gb|ABN09177.1| Single-stranded nucleic acid binding R3H [Medicago
truncatula]
Length = 353
Score = 262 bits (668), Expect = 1e-067
Identities = 172/340 (50%), Positives = 216/340 (63%), Gaps = 38/340 (11%)
Frame = -1
Query: 1125 KEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPDQLQFEFQPFPTSYLRLAAHRVAQ 946
KE+MVDPFLVEALQNPRHRLTILRMELDIQKF N DQ FEFQ FP+SYLRLAAHRVAQ
Sbjct: 17 KESMVDPFLVEALQNPRHRLTILRMELDIQKFMNNADQQHFEFQHFPSSYLRLAAHRVAQ 76
Query: 945 HYGLVTMSLENGNGALDGSDNRILVTKTAESRFPSVCLSEIPVKQPENGRPEGFKIAIKA 766
HYG+ TM + G LDG ++ILV K ES++P V LSEIP KQ +N + E KI I++
Sbjct: 77 HYGMQTMVQDIG---LDG-QSKILVRKLPESKYPVVRLSEIPAKQLDNEKSELKKIVIQS 132
Query: 765 RPKRGSGSGGSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDSEDSSSLLRAPPPPP 586
RP + S +G + S + N LRSVEERKEEYD+ARARIFN +S DS D+SS++
Sbjct: 133 RPHKTSLNGANDSTKKGNPLRSVEERKEEYDRARARIFNGSTSFDSVDTSSMV------- 185
Query: 585 PLEGVN----RNETEVA---VSNSSVDAGSRTS---RVAIIRDREKDRYDPDYDRSYERY 436
P +G N ++E+E++ +++S R + RVAIIRDREKDR DPDYDRSY RY
Sbjct: 186 PTDGKNSFMSKDESEISKIPMADSERFFSVRDNSYPRVAIIRDREKDRSDPDYDRSYGRY 245
Query: 435 VVDPSYRYVRVMSPGQGFSPMPMHIPFHDGGFPQIPRGPQANLNYGH-----PAMSPFVN 271
S V ++ P P P+ + F Q+ + PQA + G+ P MSPF
Sbjct: 246 ARSLSASAVNLV-PFNLPKAQPSFAPY-ETTFNQLGQMPQAQASLGYGPPSTPMMSPFCT 303
Query: 270 ---NPA----AYTPWPNLPSMNYVQSLNRPDFRHPSASNP 172
NPA AY WP+ P+M Y S ++ FRH +P
Sbjct: 304 PGLNPASGDGAYLQWPS-PTMMYAHSYDQ--FRHAVYQSP 340
>gi|18405560|ref|NP_565947.1| Single-stranded nucleic acid binding R3H protein
[Arabidopsis thaliana]
Length = 351
Score = 261 bits (666), Expect = 2e-067
Identities = 160/323 (49%), Positives = 198/323 (61%), Gaps = 23/323 (7%)
Frame = -1
Query: 1140 AAMTEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPDQLQFEFQPFPTSYLRLAA 961
A + +K VDPFLVEALQNPRHRLTILRMELD+Q+F Q+PDQ QFEFQ FPTSYLR AA
Sbjct: 12 AVIADKGFNVDPFLVEALQNPRHRLTILRMELDVQRFLQSPDQQQFEFQHFPTSYLRFAA 71
Query: 960 HRVAQHYGLVTMSLENGNGALDGSDNRILVTKTAESRFPSVCLSEIPVKQPENGRPEGFK 781
HRVA HYGL+T + G DG+++RI+VTK+++SRFP+ LSEIPVKQ E G+ E K
Sbjct: 72 HRVANHYGLITSVRD---GGADGNESRIVVTKSSDSRFPAARLSEIPVKQSETGKFEHMK 128
Query: 780 IAIKARPKRGSGSGGSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDSEDSSSLLRA 601
+ IK RP +GSG G ++ LL+SVEERKE+YD+ARARIFN + D DSSS
Sbjct: 129 VVIKPRPTKGSGM--EGDELKGGLLKSVEERKEDYDRARARIFNGLVNIDCNDSSSETNP 186
Query: 600 ----PPPPPPLEGVNRNETEVAVSNSSVDAGSRTSRVAIIRDREKDRYDPDYDRSYERYV 433
V +N A N+ + SR+AI+RDREKDRYDPDYDRS RY+
Sbjct: 187 WRVNCSSSRDENQVLKNGNIEADKNNISRKSNPASRIAILRDREKDRYDPDYDRSNYRYI 246
Query: 432 VD-PSYRYVRVMSPGQGFSPMPMHIPFHDGGFPQIPRGPQANLNYG-HPAMSPFV----N 271
+ P + + V F+ M P +D GF +LN G H MSP V N
Sbjct: 247 SNLPVDQNLCVAH----FNIQTMGTPIYDMGFRGYSPTAPPSLNLGQHSVMSPCVTTGLN 302
Query: 270 NP----AAYTPWPNLPSMNYVQS 214
P A Y WPN ++ Y S
Sbjct: 303 QPSRDAAMYMQWPNAAAVMYTHS 325
>gi|255636099|gb|ACU18394.1| unknown [Glycine max]
Length = 355
Score = 255 bits (650), Expect = 1e-065
Identities = 154/294 (52%), Positives = 190/294 (64%), Gaps = 17/294 (5%)
Frame = -1
Query: 1128 EKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPDQLQFEFQPFPTSYLRLAAHRVA 949
+KE+MVDPFLVEAL+NPRHR+TILRMELDIQ+F N D FEFQ FP+SYLRLAAHRVA
Sbjct: 16 DKESMVDPFLVEALENPRHRVTILRMELDIQRFLSNADYQHFEFQHFPSSYLRLAAHRVA 75
Query: 948 QHYGLVTMSLENGNGALDGSDNRILVTKTAESRFPSVCLSEIPVKQPENGRPEGFKIAIK 769
QHYG+ TM +NG LDG RI+V K AESR+P V LSEIP KQ EN +PE KIAI+
Sbjct: 76 QHYGMQTMVQDNG---LDGQGTRIMVRKMAESRYPMVRLSEIPAKQLENDKPEKIKIAIR 132
Query: 768 ARPKRGSGSGGSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDSEDSSSLLRAPPPP 589
RP + S + + +G + N RSVEERK EYD+ARARIF+S S DS+D+ S +
Sbjct: 133 PRPNKISLNEANEAGRKSNPPRSVEERKVEYDRARARIFSSSRSCDSDDTLS-QTSTDEK 191
Query: 588 PPLEGVNRNETE----VAVSNSSVDAGSRTSRVAIIRDREKDRYDPDYDRSYERYVVDPS 421
L + NET V S+ ++RVAI+RDREKDR DPDYDR+YERY
Sbjct: 192 NSLINKDENETSKTPVVYSEQCSIGRDINSTRVAILRDREKDRSDPDYDRNYERYARSIP 251
Query: 420 YRYVRVMSPGQGFSPMPMHIPF--HDGGFPQIPR--GPQANLNYGHPAMSPFVN 271
V +M F+ + PF +D F Q+ + QA+L YG P SP +N
Sbjct: 252 TSSVNLMP----FNLQQVRHPFVQYDNAFNQLSQMSQNQASLGYG-PQPSPMMN 300
>gi|224086775|ref|XP_002307959.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 240 bits (610), Expect = 6e-061
Identities = 120/176 (68%), Positives = 146/176 (82%), Gaps = 3/176 (1%)
Frame = -1
Query: 1146 AAAAMTEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPDQLQFEFQPFPTSYLRL 967
A AA+ EKE+MVDPFLVEALQNPRHRLTILRMELDIQ+F QNPDQ FEFQ FPTSYLRL
Sbjct: 8 AVAAINEKESMVDPFLVEALQNPRHRLTILRMELDIQRFLQNPDQQLFEFQHFPTSYLRL 67
Query: 966 AAHRVAQHYGLVTMSLENGNGALDGSDNRILVTKTAESRFPSVCLSEIPVKQPENGRPEG 787
AAHRVA HYGL+TM +NG +DG N+ILV KTA+SR+P+VCL+ IP KQ E+ +PE
Sbjct: 68 AAHRVAHHYGLITMVQDNG---IDGLGNKILVQKTAQSRYPAVCLTAIPAKQLESDKPEK 124
Query: 786 FKIAIKARPKRGSGSGGSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDSEDS 619
K+AI+ RP +GS + +G GV++N +RSVEERKE+YD+ARARIF+SPSS +ED+
Sbjct: 125 IKLAIRPRPNKGSINDPNGFGVKRNPVRSVEERKEDYDRARARIFSSPSSPTAEDT 180
>gi|224137642|ref|XP_002322608.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 229 bits (583), Expect = 9e-058
Identities = 117/176 (66%), Positives = 143/176 (81%), Gaps = 3/176 (1%)
Frame = -1
Query: 1146 AAAAMTEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPDQLQFEFQPFPTSYLRL 967
A AA+ EKE+M+DPFLVEALQNPRHRLTILRMELDIQ+F QNPDQ FEF FPTSYLRL
Sbjct: 8 AVAAINEKESMMDPFLVEALQNPRHRLTILRMELDIQRFLQNPDQQVFEFPHFPTSYLRL 67
Query: 966 AAHRVAQHYGLVTMSLENGNGALDGSDNRILVTKTAESRFPSVCLSEIPVKQPENGRPEG 787
AAHRVAQHYGL+TM +NG +DG N+ILV KTAE R+P+V LSEIP KQ + PE
Sbjct: 68 AAHRVAQHYGLITMVQDNG---IDGLLNKILVQKTAECRYPAVRLSEIPAKQSGSDTPEM 124
Query: 786 FKIAIKARPKRGSGSGGSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDSEDS 619
K+AI+ RP +GS + +G G++++ +RSVEERKEEYD+ARARIF+SPSS ++D+
Sbjct: 125 IKLAIRPRPNKGSINDPNGFGIKRSPVRSVEERKEEYDRARARIFSSPSSPTADDT 180
>gi|255552461|ref|XP_002517274.1| r3h domain containing protein, putative
[Ricinus communis]
Length = 350
Score = 220 bits (560), Expect = 4e-055
Identities = 115/171 (67%), Positives = 134/171 (78%), Gaps = 3/171 (1%)
Frame = -1
Query: 1134 MTEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPDQLQFEFQPFPTSYLRLAAHR 955
+ EKE+MVDPFLVEAL NP HRLTILRME DIQ+F Q PDQ QFEFQ FPTSYLRLAAHR
Sbjct: 9 INEKESMVDPFLVEALHNPSHRLTILRMEHDIQRFLQIPDQQQFEFQHFPTSYLRLAAHR 68
Query: 954 VAQHYGLVTMSLENGNGALDGSDNRILVTKTAESRFPSVCLSEIPVKQPENGRPEGFKIA 775
VAQHYGL+TM + G DG N+ILV KTAESR+P+VCL EIP KQ E +PE KI
Sbjct: 69 VAQHYGLITMVQDYG---YDGLVNKILVKKTAESRYPAVCLCEIPAKQLERDKPEQVKIV 125
Query: 774 IKARPKRGSGSGGSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDSED 622
I+ RP +GS + + GV+Q+ +RSVEERKEEYD+ARARIF+SP S S+D
Sbjct: 126 IRPRPNKGSINECNEFGVKQSPVRSVEERKEEYDRARARIFSSPCSPSSDD 176
>gi|297801050|ref|XP_002868409.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 70
Score = 127 bits (317), Expect = 6e-027
Identities = 60/67 (89%), Positives = 63/67 (94%)
Frame = -1
Query: 1140 AAMTEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPDQLQFEFQPFPTSYLRLAA 961
AAMTEKEAMVDPFLVEALQNPRHRLTIL ME+DIQKFFQNP+QLQ EF PFPTSY+R AA
Sbjct: 2 AAMTEKEAMVDPFLVEALQNPRHRLTILSMEIDIQKFFQNPEQLQLEFLPFPTSYMRFAA 61
Query: 960 HRVAQHY 940
HRVAQHY
Sbjct: 62 HRVAQHY 68
>gi|297793247|ref|XP_002864508.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 70
Score = 126 bits (315), Expect = 1e-026
Identities = 60/67 (89%), Positives = 63/67 (94%)
Frame = -1
Query: 1140 AAMTEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPDQLQFEFQPFPTSYLRLAA 961
AAMTEKEAMVDPFLVEALQNPRHRLTIL ME+DIQKFFQNP+QLQ EF PFPTSY+R AA
Sbjct: 2 AAMTEKEAMVDPFLVEALQNPRHRLTILWMEIDIQKFFQNPEQLQLEFLPFPTSYMRFAA 61
Query: 960 HRVAQHY 940
HRVAQHY
Sbjct: 62 HRVAQHY 68
>gi|297851200|ref|XP_002893481.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 70
Score = 124 bits (311), Expect = 3e-026
Identities = 59/67 (88%), Positives = 62/67 (92%)
Frame = -1
Query: 1140 AAMTEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPDQLQFEFQPFPTSYLRLAA 961
AAMTEKEAMVDPFLVEALQNPRHRLTIL ME+DIQKFFQNP+QLQ EF PFPTSY+R A
Sbjct: 2 AAMTEKEAMVDPFLVEALQNPRHRLTILWMEIDIQKFFQNPEQLQLEFLPFPTSYMRFVA 61
Query: 960 HRVAQHY 940
HRVAQHY
Sbjct: 62 HRVAQHY 68
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,509,288,697,968
Number of Sequences: 15229318
Number of Extensions: 5509288697968
Number of Successful Extensions: 1289383025
Number of sequences better than 0.0: 0
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