BLASTX 7.6.2
Query= UN51428 /QuerySize=974
(973 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G30620.1 | Symbols: | histone H1.2 | chr2:130... 178 8e-045
TAIR9_protein||AT1G06760.1 | Symbols: | histone H1, putative | ... 111 9e-025
TAIR9_protein||AT4G31880.1 | Symbols: | LOCATED IN: cytosol, ch... 51 9e-007
TAIR9_protein||AT2G18050.1 | Symbols: HIS1-3 | HIS1-3 (HISTONE H... 49 3e-006
>TAIR9_protein||AT2G30620.1 | Symbols: | histone H1.2 | chr2:13045360-13046267
FORWARD
Length = 274
Score = 178 bits (449), Expect = 8e-045
Identities = 113/158 (71%), Positives = 118/158 (74%), Gaps = 16/158 (10%)
Frame = -2
Query: 684 ASFKIPSAKPAAATKPVK--KKPAAAVTKPKGK--AAAAPAKAKPAAKGTKKPAASAAKP 517
ASFKIPSA+ AA KP KK A V KPKGK AA APAKAK AAKGTKKPAA
Sbjct: 124 ASFKIPSARSAATPKPAAPVKKKATVVAKPKGKVAAAVAPAKAKAAAKGTKKPAAKVV-A 182
Query: 516 KSKTTSTKAAAKPKVT-AKPKTKSVAAVSKTKAVAAKPKAKERPAKASRTSSRTSPGKKA 340
K+K T A K KVT AKPK+KSVAAVSKTKAVAAKPKAKERPAKASRTS+RTSPG
Sbjct: 183 KAKVT---AKPKAKVTAAKPKSKSVAAVSKTKAVAAKPKAKERPAKASRTSTRTSPG--- 236
Query: 339 APAKKAAAPAAKKAAASKKVPAKSAKVKSPAKRASTRK 226
KK AAP AKK A +KK PAKS KVKSPAKRASTRK
Sbjct: 237 ---KKVAAP-AKKVAVTKKAPAKSVKVKSPAKRASTRK 270
Score = 87 bits (214), Expect = 1e-017
Identities = 54/89 (60%), Positives = 62/89 (69%), Gaps = 11/89 (12%)
Frame = -1
Query: 922 MSTEEE--PKVVESGDAEAEAEATVTTTEKKPA----KAKAKKTKEAKKKPAAAAAP-RK 764
MS EEE P V+SG A+ TV + EKKPA K+K T +A KKP AAAP +K
Sbjct: 1 MSIEEENVPTTVDSG----AADTTVKSPEKKPAAKGGKSKKTTTAKATKKPVKAAAPTKK 56
Query: 763 RTTSSHPPYEEMIKDAIVTLKERTGSSLF 677
+TTSSHP YEEMIKDAIVTLKERTGSS +
Sbjct: 57 KTTSSHPTYEEMIKDAIVTLKERTGSSQY 85
Score = 70 bits (171), Expect = 1e-012
Identities = 53/143 (37%), Positives = 64/143 (44%), Gaps = 6/143 (4%)
Frame = -2
Query: 651 AATKPVKKKPAAAVTKPKGKAAAAPAKAKPAAKGTKKPAASAAKPKSKTTSTKAAAKPKV 472
A+ K VK K A+ P ++AA P A P KK A AKPK K + A AK K
Sbjct: 115 ASEKLVKVK--ASFKIPSARSAATPKPAAP----VKKKATVVAKPKGKVAAAVAPAKAKA 168
Query: 471 TAKPKTKSVAAVSKTKAVAAKPKAKERPAKASRTSSRTSPGKKAAPAKKAAAPAAKKAAA 292
AK K A V V AKPKAK AK S KA AK A KA+
Sbjct: 169 AAKGTKKPAAKVVAKAKVTAKPKAKVTAAKPKSKSVAAVSKTKAVAAKPKAKERPAKASR 228
Query: 291 SKKVPAKSAKVKSPAKRASTRKK 223
+ + KV +PAK+ + KK
Sbjct: 229 TSTRTSPGKKVAAPAKKVAVTKK 251
Score = 69 bits (166), Expect = 5e-012
Identities = 54/133 (40%), Positives = 65/133 (48%), Gaps = 5/133 (3%)
Frame = -2
Query: 669 PSAKPAAATKPVKKKPAAAVTKPKGKAAAAPAKAKPAAKGTKKPAASAAKPKSKTTSTKA 490
P K A K K AAAV K KAAA K KPAAK K A AKPK+K T+ K
Sbjct: 142 PVKKKATVVAKPKGKVAAAVAPAKAKAAAKGTK-KPAAKVVAK-AKVTAKPKAKVTAAKP 199
Query: 489 AAKPKVTAKPKTKSVAAVSKTKAVAAKPKAKERPAKASRTSSRTSPGKKAAPAKKAAAPA 310
+K V A KTK+VAA K KA KA + S +P KK A KKA A +
Sbjct: 200 KSK-SVAAVSKTKAVAA--KPKAKERPAKASRTSTRTSPGKKVAAPAKKVAVTKKAPAKS 256
Query: 309 AKKAAASKKVPAK 271
K + +K+ +
Sbjct: 257 VKVKSPAKRASTR 269
>TAIR9_protein||AT1G06760.1 | Symbols: | histone H1, putative |
chr1:2076687-2077616 REVERSE
Length = 275
Score = 111 bits (276), Expect = 9e-025
Identities = 81/163 (49%), Positives = 94/163 (57%), Gaps = 22/163 (13%)
Frame = -2
Query: 684 ASFKIPSAKPAAATKPVKKKPAAAVTKPKGKAAAAPAKAKPA----AKGTKKPAASAAKP 517
ASFK+PSA A++ P AA K +APAK KPA K +K AA++
Sbjct: 124 ASFKLPSASAKASS------PKAAAEK------SAPAKKKPATVAVTKAKRKVAAASKAK 171
Query: 516 KSKTTSTKAAAKPKVTAKPKTKSV----AAVSKTKAVAAKPKAKERPAKASRTSSRTSPG 349
K+ K AA KVTAK K K V AA +K KAV AKPKAK RPAKA++T+ TSP
Sbjct: 172 KTIAVKPKTAAAKKVTAKAKAKPVPRATAAATKRKAVDAKPKAKARPAKAAKTAKVTSPA 231
Query: 348 KKA-APAKKAAAPAAKKAAASKKVPAKSAKVKSPAKRASTRKK 223
KKA A KK A A KK KKV K VKSPAKRAS+R K
Sbjct: 232 KKAVAATKKVATVATKKKTPVKKV-VKPKTVKSPAKRASSRVK 273
Score = 86 bits (210), Expect = 4e-017
Identities = 47/81 (58%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
Frame = -1
Query: 913 EEEPKVVESGDAEAEAEATVTTTEKKPAK--AKAKKTKEAKKKPAAAAAPRKRTTSSHPP 740
E E G+ A+A T EKKPA K K KE K+K AAAP+KRT SSHP
Sbjct: 5 EIENAATIEGNTAADAPVTDAAVEKKPAAKGRKTKNVKEVKEKKTVAAAPKKRTVSSHPT 64
Query: 739 YEEMIKDAIVTLKERTGSSLF 677
YEEMIKDAIVTLKERTGSS +
Sbjct: 65 YEEMIKDAIVTLKERTGSSQY 85
Score = 70 bits (170), Expect = 2e-012
Identities = 48/142 (33%), Positives = 66/142 (46%), Gaps = 7/142 (4%)
Frame = -2
Query: 651 AATKPVKKKPAAAVTKPKGKAAAAPAKAKPAAKGTKKPAASAAKPKSKTTSTKAAAKPKV 472
A+ K VK K + + KA++ A A+ +A KKPA A + + + AK +
Sbjct: 115 ASGKLVKVKASFKLPSASAKASSPKAAAEKSAPAKKKPATVAVTKAKRKVAAASKAKKTI 174
Query: 471 TAKPKTKSVAAVSKTKAVAAKPKAKERPAKASRTSSRTSPGKKAAPAK-----KAAAPAA 307
KPKT AA T AKP + A R + P KA PAK K +PA
Sbjct: 175 AVKPKT--AAAKKVTAKAKAKPVPRATAAATKRKAVDAKPKAKARPAKAAKTAKVTSPAK 232
Query: 306 KKAAASKKVPAKSAKVKSPAKR 241
K AA+KKV + K K+P K+
Sbjct: 233 KAVAATKKVATVATKKKTPVKK 254
Score = 59 bits (142), Expect = 3e-009
Identities = 46/129 (35%), Positives = 57/129 (44%), Gaps = 5/129 (3%)
Frame = -2
Query: 594 KAAAAPAKAKPAAKGTKKPAASAAKPKSKTTSTKAA---AKPKVTAKPKTK-SVAAVSKT 427
K A K K P+ASA K + K+A KP A K K VAA SK
Sbjct: 111 KRLVASGKLVKVKASFKLPSASAKASSPKAAAEKSAPAKKKPATVAVTKAKRKVAAASKA 170
Query: 426 -KAVAAKPKAKERPAKASRTSSRTSPGKKAAPAKKAAAPAAKKAAASKKVPAKSAKVKSP 250
K +A KPK ++ ++ P AA K+ A A KA A AK+AKV SP
Sbjct: 171 KKTIAVKPKTAAAKKVTAKAKAKPVPRATAAATKRKAVDAKPKAKARPAKAAKTAKVTSP 230
Query: 249 AKRASTRKK 223
AK+A K
Sbjct: 231 AKKAVAATK 239
Score = 59 bits (140), Expect = 5e-009
Identities = 48/123 (39%), Positives = 59/123 (47%), Gaps = 12/123 (9%)
Frame = -2
Query: 684 ASFKIPSAKPAAATKPVKKKPAAAVTKPKGKAAAAPAKAKPAAKGT---KKPAASAAKPK 514
A K+ +A A T VK K AAA K A AKAKP + T K A AKPK
Sbjct: 160 AKRKVAAASKAKKTIAVKPKTAAA------KKVTAKAKAKPVPRATAAATKRKAVDAKPK 213
Query: 513 SKTTSTKAAAKPKVTAKPKTKSVAAVSKTKAVAAKPKAKERPAKASRTSSRTSPGKKAAP 334
+K KAA KVT+ P K+VAA K VA K K + K + + SP K+A+
Sbjct: 214 AKARPAKAAKTAKVTS-PAKKAVAATKKVATVATKKKTPVK--KVVKPKTVKSPAKRASS 270
Query: 333 AKK 325
K
Sbjct: 271 RVK 273
>TAIR9_protein||AT4G31880.1 | Symbols: | LOCATED IN: cytosol, chloroplast;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages;
BEST Arabidopsis thaliana protein match is: binding (TAIR:AT1G15940.1);
Has 114836 Blast hits to 56273 proteins in 1914 species: Archae - 187;
Bacteria - 15478; Metazoa - 53116; Fungi - 16017; Plants - 4342;
Viruses - 719; Other Eukaryotes - 24977 (source: NCBI BLink). |
chr4:15419435-15423939 REVERSE
Length = 874
Score = 51 bits (121), Expect = 9e-007
Identities = 39/146 (26%), Positives = 64/146 (43%), Gaps = 4/146 (2%)
Frame = -2
Query: 672 IPSAKPAAATKPVKKKPAAAVTKPKGKAAAAPAKAKPAAKGTKKPAASAAKPKSKTTSTK 493
+P K A K K ++A K A ++ AKA PA+K +K + K SK+ +K
Sbjct: 684 VPLTKKAKTGKQSKMDNSSA--KKGSGAGSSKAKATPASKSSK--TSQDDKTASKSKDSK 739
Query: 492 AAAKPKVTAKPKTKSVAAVSKTKAVAAKPKAKERPAKASRTSSRTSPGKKAAPAKKAAAP 313
A++ + + + KT + ++K+ + S++ + KK KA
Sbjct: 740 EASREEEASSEEESEEEEPPKTVGKSGSSRSKKDISSVSKSGKSKASSKKKEEPSKATTS 799
Query: 312 AAKKAAASKKVPAKSAKVKSPAKRAS 235
+ K+ K VPAKS K AK S
Sbjct: 800 SKSKSGPVKSVPAKSKTGKGKAKSGS 825
>TAIR9_protein||AT2G18050.1 | Symbols: HIS1-3 | HIS1-3 (HISTONE H1-3); DNA
binding / nucleosomal DNA binding | chr2:7846095-7846670 FORWARD
Length = 168
Score = 49 bits (116), Expect = 3e-006
Identities = 22/38 (57%), Positives = 29/38 (76%)
Frame = -1
Query: 796 KKPAAAAAPRKRTTSSHPPYEEMIKDAIVTLKERTGSS 683
KK AA PRK T++HPPY +MIK+A++ LKE+ GSS
Sbjct: 8 KKTPAAKKPRKPKTTTHPPYFQMIKEALMVLKEKNGSS 45
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,362,971,177
Number of Sequences: 33410
Number of Extensions: 24362971177
Number of Successful Extensions: 776946381
Number of sequences better than 0.0: 0
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