BLASTX 7.6.2
Query= UN51480 /QuerySize=640
(639 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9LP37|RK34_ARATH 50S ribosomal protein L34, chloroplastic OS... 246 1e-064
sp|P82244|RK34_SPIOL 50S ribosomal protein L34, chloroplastic OS... 159 2e-038
sp|Q7X5L7|RL34_THEBO 50S ribosomal protein L34 OS=Thermus brocki... 56 1e-007
sp|Q7X5K9|RL34_THESC 50S ribosomal protein L34 OS=Thermus scotod... 56 1e-007
sp|Q7X5L1|RL34_THEOS 50S ribosomal protein L34 OS=Thermus oshima... 55 4e-007
sp|Q7X5L5|RL34_THEAQ 50S ribosomal protein L34 OS=Thermus aquati... 54 6e-007
sp|P80340|RL34_THET8 50S ribosomal protein L34 OS=Thermus thermo... 54 7e-007
sp|B7J3D6|RL34_ACIF2 50S ribosomal protein L34 OS=Acidithiobacil... 51 5e-006
sp|B5EJJ2|RL34_ACIF5 50S ribosomal protein L34 OS=Acidithiobacil... 51 5e-006
>sp|Q9LP37|RK34_ARATH 50S ribosomal protein L34, chloroplastic OS=Arabidopsis
thaliana GN=RPL34 PE=2 SV=1
Length = 157
Score = 246 bits (627), Expect = 1e-064
Identities = 132/156 (84%), Positives = 142/156 (91%), Gaps = 4/156 (2%)
Frame = -3
Query: 637 TSVVASASSRLWHPASNAGKISVPSASLSLRSGSRRSQFSLGCSSASASSQLLHCSFLSS 458
TSVVASASSRLW+PA++ GKI VPSASLSLR+G RRS SL ++SASSQLLHCSFLSS
Sbjct: 6 TSVVASASSRLWNPAASNGKICVPSASLSLRTGCRRSSSSL---TSSASSQLLHCSFLSS 62
Query: 457 SLSLSSTFSGLSIAFDVSSGTSGLNGQKKRRGFVVRAGKAALCQTKRSRSRKSLARTHGF 278
+SL+S FSGLSIAFD+SS TSGLNGQ +RRG VVRAGKAALCQTKRSRSRKSLARTHGF
Sbjct: 63 PVSLASPFSGLSIAFDLSSQTSGLNGQ-RRRGLVVRAGKAALCQTKRSRSRKSLARTHGF 121
Query: 277 RLRMRTTSGRATIKRRRAKGRWNLCPKSNPSSGKRA 170
R RMRTTSGRATIKRRRAKGRWNLCPKSNPSSGKRA
Sbjct: 122 RRRMRTTSGRATIKRRRAKGRWNLCPKSNPSSGKRA 157
>sp|P82244|RK34_SPIOL 50S ribosomal protein L34, chloroplastic OS=Spinacia
oleracea GN=RPL34 PE=1 SV=1
Length = 152
Score = 159 bits (401), Expect = 2e-038
Identities = 89/133 (66%), Positives = 103/133 (77%), Gaps = 2/133 (1%)
Frame = -3
Query: 568 PSASLSLRSGSRRSQFSLGCSSASASSQLLHCSFLSSSLSLSSTFSGLSIAFDVSSGTSG 389
PSASL+ +GSR + + + SA S LHCSFL+ S SLSS FSGLS+ D++S T G
Sbjct: 20 PSASLTFITGSRTTNKRVSFNGGSARSGSLHCSFLAPSSSLSSNFSGLSLGLDLTSNT-G 78
Query: 388 LNGQKKRRGFVVRAGKAALCQTKRSRSRKSLARTHGFRLRMRTTSGRATIKRRRAKGRWN 209
++ + RR FVVRAGKAALC TKRSRSRKSLARTHGFRLRM TTSGRA +KRRRAKGR
Sbjct: 79 VSTDRCRR-FVVRAGKAALCLTKRSRSRKSLARTHGFRLRMSTTSGRALLKRRRAKGRKI 137
Query: 208 LCPKSNPSSGKRA 170
LC K+NPSSGKRA
Sbjct: 138 LCTKTNPSSGKRA 150
>sp|Q7X5L7|RL34_THEBO 50S ribosomal protein L34 OS=Thermus brockianus GN=rpmH
PE=3 SV=1
Length = 48
Score = 56 bits (134), Expect = 1e-007
Identities = 24/40 (60%), Positives = 29/40 (72%)
Frame = -3
Query: 310 SRKSLARTHGFRLRMRTTSGRATIKRRRAKGRWNLCPKSN 191
+R+ A+THGFR RM+T GR +KRRR KGRW L PK N
Sbjct: 8 NRRKRAKTHGFRARMKTPGGRKVLKRRRQKGRWRLTPKVN 47
>sp|Q7X5K9|RL34_THESC 50S ribosomal protein L34 OS=Thermus scotoductus GN=rpmH
PE=3 SV=1
Length = 48
Score = 56 bits (134), Expect = 1e-007
Identities = 24/40 (60%), Positives = 29/40 (72%)
Frame = -3
Query: 310 SRKSLARTHGFRLRMRTTSGRATIKRRRAKGRWNLCPKSN 191
+R+ A+THGFR RMRT GR +KRRR KGRW L P+ N
Sbjct: 8 NRRKRAKTHGFRARMRTPGGRKVLKRRRQKGRWRLTPRVN 47
>sp|Q7X5L1|RL34_THEOS 50S ribosomal protein L34 OS=Thermus oshimai GN=rpmH PE=3
SV=1
Length = 48
Score = 55 bits (130), Expect = 4e-007
Identities = 23/38 (60%), Positives = 28/38 (73%)
Frame = -3
Query: 310 SRKSLARTHGFRLRMRTTSGRATIKRRRAKGRWNLCPK 197
+R+ A+THGFR RMRT GR +KRRR KGRW L P+
Sbjct: 8 NRRKRAKTHGFRARMRTPGGRKVLKRRRQKGRWRLTPR 45
>sp|Q7X5L5|RL34_THEAQ 50S ribosomal protein L34 OS=Thermus aquaticus GN=rpmH
PE=3 SV=1
Length = 48
Score = 54 bits (129), Expect = 6e-007
Identities = 23/38 (60%), Positives = 28/38 (73%)
Frame = -3
Query: 310 SRKSLARTHGFRLRMRTTSGRATIKRRRAKGRWNLCPK 197
+R+ A+THGFR RM+T GR +KRRR KGRW L PK
Sbjct: 8 NRRKRAKTHGFRARMKTPGGRNVLKRRRRKGRWRLTPK 45
>sp|P80340|RL34_THET8 50S ribosomal protein L34 OS=Thermus thermophilus (strain
HB8 / ATCC 27634 / DSM 579) GN=rpmH PE=1 SV=3
Length = 49
Score = 54 bits (128), Expect = 7e-007
Identities = 23/37 (62%), Positives = 27/37 (72%)
Frame = -3
Query: 310 SRKSLARTHGFRLRMRTTSGRATIKRRRAKGRWNLCP 200
+R+ A+THGFR RMRT GR +KRRR KGRW L P
Sbjct: 8 NRRKRAKTHGFRARMRTPGGRKVLKRRRQKGRWRLTP 44
>sp|B7J3D6|RL34_ACIF2 50S ribosomal protein L34 OS=Acidithiobacillus
ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=rpmH PE=3
SV=1
Length = 44
Score = 51 bits (121), Expect = 5e-006
Identities = 23/31 (74%), Positives = 24/31 (77%)
Frame = -3
Query: 292 RTHGFRLRMRTTSGRATIKRRRAKGRWNLCP 200
RTHGFR RM T SGR +KRRRAKGR LCP
Sbjct: 14 RTHGFRARMATKSGRLVLKRRRAKGRQRLCP 44
>sp|B5EJJ2|RL34_ACIF5 50S ribosomal protein L34 OS=Acidithiobacillus
ferrooxidans (strain ATCC 53993) GN=rpmH PE=3 SV=1
Length = 44
Score = 51 bits (121), Expect = 5e-006
Identities = 23/31 (74%), Positives = 24/31 (77%)
Frame = -3
Query: 292 RTHGFRLRMRTTSGRATIKRRRAKGRWNLCP 200
RTHGFR RM T SGR +KRRRAKGR LCP
Sbjct: 14 RTHGFRARMATKSGRLVLKRRRAKGRQRLCP 44
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 191,186,815,274
Number of Sequences: 518415
Number of Extensions: 191186815274
Number of Successful Extensions: 1167985300
Number of sequences better than 0.0: 0
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