BLASTX 7.6.2
Query= UN51532 /QuerySize=1019
(1018 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G52150.1 | Symbols: | RNA recognition motif (... 357 8e-099
TAIR9_protein||AT3G52150.2 | Symbols: | RNA recognition motif (... 357 8e-099
TAIR9_protein||AT3G52380.1 | Symbols: CP33, PDE322 | CP33; RNA b... 145 5e-035
TAIR9_protein||AT4G24770.1 | Symbols: RBP31, ATRBP31, CP31, ATRB... 84 1e-016
TAIR9_protein||AT2G37220.1 | Symbols: | 29 kDa ribonucleoprotei... 78 7e-015
TAIR9_protein||AT5G50250.1 | Symbols: | 31 kDa ribonucleoprotei... 75 8e-014
TAIR9_protein||AT3G53460.1 | Symbols: CP29 | CP29; RNA binding /... 72 5e-013
TAIR9_protein||AT3G53460.2 | Symbols: CP29 | CP29; RNA binding /... 72 5e-013
TAIR9_protein||AT1G60000.1 | Symbols: | 29 kDa ribonucleoprotei... 64 1e-010
TAIR9_protein||AT4G13860.1 | Symbols: | glycine-rich RNA-bindin... 63 3e-010
TAIR9_protein||AT5G61030.1 | Symbols: GR-RBP3 | GR-RBP3 (glycine... 59 3e-009
>TAIR9_protein||AT3G52150.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr3:19342074-19343090 FORWARD
Length = 254
Score = 357 bits (915), Expect = 8e-099
Identities = 190/236 (80%), Positives = 210/236 (88%), Gaps = 11/236 (4%)
Frame = -1
Query: 859 PMHSLSKPKPFLLSPDPSL----PRTSRMRLIPRATLETEEKP-ALDPNAESSRRVYIGN 695
P+H ++ F P PSL R+SR R IP A ETEEKP ALDP++E++RRVYIGN
Sbjct: 25 PLH--TRVNVFSSKPFPSLAGTFSRSSRTRFIPYAVTETEEKPAALDPSSEAARRVYIGN 82
Query: 694 IPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDANAVIEKLNGTTI 515
IPRTVTNEQLTKLVEEHGAVE+VQVMYDKYSGRSRRFGFATMKSVEDANAV+EKLNG T+
Sbjct: 83 IPRTVTNEQLTKLVEEHGAVEKVQVMYDKYSGRSRRFGFATMKSVEDANAVVEKLNGNTV 142
Query: 514 EGREVKVNITEKPIELSSSSSPDLSLLQSEDAAFVDSPYKVYVGNLAKSVTKEMLENLFS 335
EGRE+KVNITEKPI +SSPDLS+LQSED+AFVDSPYKVYVGNLAK+VTKEMLENLFS
Sbjct: 143 EGREIKVNITEKPI----ASSPDLSVLQSEDSAFVDSPYKVYVGNLAKTVTKEMLENLFS 198
Query: 334 EKGKVLSAKVSRVPGTSKSTGFGFVTFSSDEDVDAAILALNNSLLEGQKIRVNKA* 167
EKGKV+SAKVSRVPGTSKSTGFGFVTFSS+EDV+AAI+ALNNSLLEGQKIRVNKA*
Sbjct: 199 EKGKVVSAKVSRVPGTSKSTGFGFVTFSSEEDVEAAIVALNNSLLEGQKIRVNKA* 254
>TAIR9_protein||AT3G52150.2 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr3:19342074-19343090 FORWARD
Length = 254
Score = 357 bits (915), Expect = 8e-099
Identities = 190/236 (80%), Positives = 210/236 (88%), Gaps = 11/236 (4%)
Frame = -1
Query: 859 PMHSLSKPKPFLLSPDPSL----PRTSRMRLIPRATLETEEKP-ALDPNAESSRRVYIGN 695
P+H ++ F P PSL R+SR R IP A ETEEKP ALDP++E++RRVYIGN
Sbjct: 25 PLH--TRVNVFSSKPFPSLAGTFSRSSRTRFIPYAVTETEEKPAALDPSSEAARRVYIGN 82
Query: 694 IPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDANAVIEKLNGTTI 515
IPRTVTNEQLTKLVEEHGAVE+VQVMYDKYSGRSRRFGFATMKSVEDANAV+EKLNG T+
Sbjct: 83 IPRTVTNEQLTKLVEEHGAVEKVQVMYDKYSGRSRRFGFATMKSVEDANAVVEKLNGNTV 142
Query: 514 EGREVKVNITEKPIELSSSSSPDLSLLQSEDAAFVDSPYKVYVGNLAKSVTKEMLENLFS 335
EGRE+KVNITEKPI +SSPDLS+LQSED+AFVDSPYKVYVGNLAK+VTKEMLENLFS
Sbjct: 143 EGREIKVNITEKPI----ASSPDLSVLQSEDSAFVDSPYKVYVGNLAKTVTKEMLENLFS 198
Query: 334 EKGKVLSAKVSRVPGTSKSTGFGFVTFSSDEDVDAAILALNNSLLEGQKIRVNKA* 167
EKGKV+SAKVSRVPGTSKSTGFGFVTFSS+EDV+AAI+ALNNSLLEGQKIRVNKA*
Sbjct: 199 EKGKVVSAKVSRVPGTSKSTGFGFVTFSSEEDVEAAIVALNNSLLEGQKIRVNKA* 254
>TAIR9_protein||AT3G52380.1 | Symbols: CP33, PDE322 | CP33; RNA binding |
chr3:19421619-19422855 FORWARD
Length = 330
Score = 145 bits (365), Expect = 5e-035
Identities = 75/197 (38%), Positives = 120/197 (60%), Gaps = 2/197 (1%)
Frame = -1
Query: 760 ETEEKPALDPNAESSRRVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFG 581
E EE+ + R+Y+GN+P T+T+ +L+++ E G V VQ++YDK + RSR FG
Sbjct: 101 EVEEEKQTTQASGEEGRLYVGNLPYTITSSELSQIFGEAGTVVDVQIVYDKVTDRSRGFG 160
Query: 580 FATMKSVEDANAVIEKLNGTTIEGREVKVNITEKPIELSSSSSPDLSLLQSEDAAFVDSP 401
F TM S+E+A ++ N + I GR VKVN E P + + ++ + ++VDSP
Sbjct: 161 FVTMGSIEEAKEAMQMFNSSQIGGRTVKVNFPEVP--RGGENEVMRTKIRDNNRSYVDSP 218
Query: 400 YKVYVGNLAKSVTKEMLENLFSEKGKVLSAKVSRVPGTSKSTGFGFVTFSSDEDVDAAIL 221
+KVY GNL ++T + L++ F ++ VL AKV T +S GFGF++F S E+V +A+
Sbjct: 219 HKVYAGNLGWNLTSQGLKDAFGDQPGVLGAKVIYERNTGRSRGFGFISFESAENVQSALA 278
Query: 220 ALNNSLLEGQKIRVNKA 170
+N +EG+ +R+N A
Sbjct: 279 TMNGVEVEGRALRLNLA 295
>TAIR9_protein||AT4G24770.1 | Symbols: RBP31, ATRBP31, CP31, ATRBP33 | RBP31
(31-KDA RNA BINDING PROTEIN); RNA binding / poly(U) binding |
chr4:12766223-12767952 REVERSE
Length = 330
Score = 84 bits (207), Expect = 1e-016
Identities = 38/82 (46%), Positives = 56/82 (68%)
Frame = -1
Query: 724 ESSRRVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDANA 545
E + RVY+GN+P V N +L +L EHG V + +V+YD+ +GRSR FGF TM V++ N
Sbjct: 241 EPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNE 300
Query: 544 VIEKLNGTTIEGREVKVNITEK 479
I L+G +EGR ++VN+ E+
Sbjct: 301 AISALDGQNLEGRAIRVNVAEE 322
Score = 70 bits (171), Expect = 1e-012
Identities = 39/77 (50%), Positives = 50/77 (64%)
Frame = -1
Query: 400 YKVYVGNLAKSVTKEMLENLFSEKGKVLSAKVSRVPGTSKSTGFGFVTFSSDEDVDAAIL 221
++VYVGNL V LE LFSE GKV+ A+V T +S GFGFVT S ++++ AI
Sbjct: 244 FRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAIS 303
Query: 220 ALNNSLLEGQKIRVNKA 170
AL+ LEG+ IRVN A
Sbjct: 304 ALDGQNLEGRAIRVNVA 320
>TAIR9_protein||AT2G37220.1 | Symbols: | 29 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein cp29, putative | chr2:15634980-15636331
REVERSE
Length = 290
Score = 78 bits (191), Expect = 7e-015
Identities = 36/90 (40%), Positives = 56/90 (62%)
Frame = -1
Query: 745 PALDPNAESSRRVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMK 566
P + + + ++++GN+P V + QL +L E G VE V+V+YDK +GRSR FGF TM
Sbjct: 81 PPKEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMS 140
Query: 565 SVEDANAVIEKLNGTTIEGREVKVNITEKP 476
SV + A ++ NG ++GR ++VN P
Sbjct: 141 SVSEVEAAAQQFNGYELDGRPLRVNAGPPP 170
Score = 70 bits (170), Expect = 2e-012
Identities = 36/76 (47%), Positives = 55/76 (72%)
Frame = -1
Query: 397 KVYVGNLAKSVTKEMLENLFSEKGKVLSAKVSRVPGTSKSTGFGFVTFSSDEDVDAAILA 218
+VYVGNL+ V LE+LFSE+GKV+ A+V + +S GFGFVT+ S ++V AI +
Sbjct: 205 RVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKS 264
Query: 217 LNNSLLEGQKIRVNKA 170
L+ + L+G++IRV++A
Sbjct: 265 LDGADLDGRQIRVSEA 280
Score = 66 bits (160), Expect = 3e-011
Identities = 32/82 (39%), Positives = 50/82 (60%)
Frame = -1
Query: 727 AESSRRVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDAN 548
A S RVY+GN+ V + L L E G V + +V+YD+ SGRS+ FGF T S ++
Sbjct: 200 AGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQ 259
Query: 547 AVIEKLNGTTIEGREVKVNITE 482
I+ L+G ++GR+++V+ E
Sbjct: 260 NAIKSLDGADLDGRQIRVSEAE 281
>TAIR9_protein||AT5G50250.1 | Symbols: | 31 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein RNP-T, putative / RNA-binding protein
1/2/3, putative / RNA-binding protein cp31, putative |
chr5:20452677-20453965 REVERSE
Length = 290
Score = 75 bits (182), Expect = 8e-014
Identities = 35/91 (38%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Frame = -1
Query: 748 KPALDPNA-ESSRRVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFAT 572
+P P +++ R+Y+GN+P V + +L +L EHG V +V+ D+ +GRSR FGF
Sbjct: 195 RPERQPRVYDAAFRIYVGNLPWDVDSGRLERLFSEHGKVVDARVVSDRETGRSRGFGFVQ 254
Query: 571 MKSVEDANAVIEKLNGTTIEGREVKVNITEK 479
M + + N I L+G +EGR +KVN+ E+
Sbjct: 255 MSNENEVNVAIAALDGQNLEGRAIKVNVAEE 285
Score = 73 bits (177), Expect = 3e-013
Identities = 38/80 (47%), Positives = 52/80 (65%)
Frame = -1
Query: 409 DSPYKVYVGNLAKSVTKEMLENLFSEKGKVLSAKVSRVPGTSKSTGFGFVTFSSDEDVDA 230
D+ +++YVGNL V LE LFSE GKV+ A+V T +S GFGFV S++ +V+
Sbjct: 204 DAAFRIYVGNLPWDVDSGRLERLFSEHGKVVDARVVSDRETGRSRGFGFVQMSNENEVNV 263
Query: 229 AILALNNSLLEGQKIRVNKA 170
AI AL+ LEG+ I+VN A
Sbjct: 264 AIAALDGQNLEGRAIKVNVA 283
>TAIR9_protein||AT3G53460.1 | Symbols: CP29 | CP29; RNA binding / poly(U)
binding | chr3:19819738-19821423 REVERSE
Length = 343
Score = 72 bits (175), Expect = 5e-013
Identities = 37/76 (48%), Positives = 55/76 (72%)
Frame = -1
Query: 397 KVYVGNLAKSVTKEMLENLFSEKGKVLSAKVSRVPGTSKSTGFGFVTFSSDEDVDAAILA 218
++YVGNL+ V LENLF+E+GKV+ A+V + +S GFGFVT SS ++V AI +
Sbjct: 258 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 317
Query: 217 LNNSLLEGQKIRVNKA 170
LN + L+G++IRV++A
Sbjct: 318 LNGADLDGRQIRVSEA 333
Score = 72 bits (175), Expect = 5e-013
Identities = 35/87 (40%), Positives = 52/87 (59%)
Frame = -1
Query: 712 RVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDANAVIEK 533
++++GN+ V + QL +L E G VE V+V+YDK +GRSR FGF TM + + A ++
Sbjct: 100 KLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQ 159
Query: 532 LNGTTIEGREVKVNITEKPIELSSSSS 452
NG EGR ++VN P + S S
Sbjct: 160 FNGYEFEGRPLRVNAGPPPPKREESFS 186
Score = 68 bits (164), Expect = 9e-012
Identities = 31/80 (38%), Positives = 49/80 (61%)
Frame = -1
Query: 721 SSRRVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDANAV 542
S R+Y+GN+ V + L L E G V + +V+YD+ SGRS+ FGF T+ S ++
Sbjct: 255 SGNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKA 314
Query: 541 IEKLNGTTIEGREVKVNITE 482
I LNG ++GR+++V+ E
Sbjct: 315 INSLNGADLDGRQIRVSEAE 334
>TAIR9_protein||AT3G53460.2 | Symbols: CP29 | CP29; RNA binding / poly(U)
binding | chr3:19819738-19821423 REVERSE
Length = 343
Score = 72 bits (175), Expect = 5e-013
Identities = 37/76 (48%), Positives = 55/76 (72%)
Frame = -1
Query: 397 KVYVGNLAKSVTKEMLENLFSEKGKVLSAKVSRVPGTSKSTGFGFVTFSSDEDVDAAILA 218
++YVGNL+ V LENLF+E+GKV+ A+V + +S GFGFVT SS ++V AI +
Sbjct: 258 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 317
Query: 217 LNNSLLEGQKIRVNKA 170
LN + L+G++IRV++A
Sbjct: 318 LNGADLDGRQIRVSEA 333
Score = 72 bits (175), Expect = 5e-013
Identities = 35/87 (40%), Positives = 52/87 (59%)
Frame = -1
Query: 712 RVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDANAVIEK 533
++++GN+ V + QL +L E G VE V+V+YDK +GRSR FGF TM + + A ++
Sbjct: 100 KLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQ 159
Query: 532 LNGTTIEGREVKVNITEKPIELSSSSS 452
NG EGR ++VN P + S S
Sbjct: 160 FNGYEFEGRPLRVNAGPPPPKREESFS 186
Score = 68 bits (164), Expect = 9e-012
Identities = 31/80 (38%), Positives = 49/80 (61%)
Frame = -1
Query: 721 SSRRVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDANAV 542
S R+Y+GN+ V + L L E G V + +V+YD+ SGRS+ FGF T+ S ++
Sbjct: 255 SGNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKA 314
Query: 541 IEKLNGTTIEGREVKVNITE 482
I LNG ++GR+++V+ E
Sbjct: 315 INSLNGADLDGRQIRVSEAE 334
>TAIR9_protein||AT1G60000.1 | Symbols: | 29 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein cp29, putative | chr1:22093678-22094540
REVERSE
Length = 259
Score = 64 bits (154), Expect = 1e-010
Identities = 33/87 (37%), Positives = 56/87 (64%)
Frame = -1
Query: 430 SEDAAFVDSPYKVYVGNLAKSVTKEMLENLFSEKGKVLSAKVSRVPGTSKSTGFGFVTFS 251
+++ + ++ +K++VGNL+ +VT E L F E G V+ A+V T +S G+GFV +S
Sbjct: 167 NKEPLYPETEHKLFVGNLSWTVTSESLAGAFRECGDVVGARVVFDGDTGRSRGYGFVCYS 226
Query: 250 SDEDVDAAILALNNSLLEGQKIRVNKA 170
S +++ A+ +L+ LEG+ IRVN A
Sbjct: 227 SKAEMETALESLDGFELEGRAIRVNLA 253
Score = 62 bits (148), Expect = 7e-010
Identities = 31/90 (34%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Frame = -1
Query: 748 KPALDP-NAESSRRVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFAT 572
KP +P E+ ++++GN+ TVT+E L E G V +V++D +GRSR +GF
Sbjct: 165 KPNKEPLYPETEHKLFVGNLSWTVTSESLAGAFRECGDVVGARVVFDGDTGRSRGYGFVC 224
Query: 571 MKSVEDANAVIEKLNGTTIEGREVKVNITE 482
S + +E L+G +EGR ++VN+ +
Sbjct: 225 YSSKAEMETALESLDGFELEGRAIRVNLAQ 254
>TAIR9_protein||AT4G13860.1 | Symbols: | glycine-rich RNA-binding protein,
putative | chr4:8022601-8023162 FORWARD
Length = 88
Score = 63 bits (151), Expect = 3e-010
Identities = 31/73 (42%), Positives = 46/73 (63%)
Frame = -1
Query: 397 KVYVGNLAKSVTKEMLENLFSEKGKVLSAKVSRVPGTSKSTGFGFVTFSSDEDVDAAILA 218
+VYVGNL+ + T +ML FS G V+ A V R T +S GFGFVT+SS + +AA+
Sbjct: 4 RVYVGNLSPTTTDDMLREAFSGYGNVVDAIVMRDRYTDRSRGFGFVTYSSHSEAEAAVSG 63
Query: 217 LNNSLLEGQKIRV 179
++ L G+++ V
Sbjct: 64 MDGKELNGRRVSV 76
>TAIR9_protein||AT5G61030.1 | Symbols: GR-RBP3 | GR-RBP3 (glycine-rich
RNA-binding protein 3); ATP binding / RNA binding |
chr5:24560870-24562152 FORWARD
Length = 310
Score = 59 bits (142), Expect = 3e-009
Identities = 29/77 (37%), Positives = 48/77 (62%)
Frame = -1
Query: 721 SSRRVYIGNIPRTVTNEQLTKLVEEHGAVEQVQVMYDKYSGRSRRFGFATMKSVEDANAV 542
SS +++IG + ++ + L + ++G V +V+ D+ +GRSR FGF T S E A++
Sbjct: 38 SSSKLFIGGMAYSMDEDSLREAFTKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAASSA 97
Query: 541 IEKLNGTTIEGREVKVN 491
I+ L+G + GR VKVN
Sbjct: 98 IQALDGRDLHGRVVKVN 114
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,452,599,670
Number of Sequences: 33410
Number of Extensions: 24452599670
Number of Successful Extensions: 782539451
Number of sequences better than 0.0: 0
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