BLASTX 7.6.2
Query= UN51894 /QuerySize=760
(759 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G53460.1 | Symbols: CP29 | CP29; RNA binding /... 286 1e-077
TAIR9_protein||AT3G53460.2 | Symbols: CP29 | CP29; RNA binding /... 286 1e-077
TAIR9_protein||AT2G37220.1 | Symbols: | 29 kDa ribonucleoprotei... 204 7e-053
TAIR9_protein||AT4G24770.1 | Symbols: RBP31, ATRBP31, CP31, ATRB... 101 9e-022
TAIR9_protein||AT5G50250.1 | Symbols: | 31 kDa ribonucleoprotei... 96 2e-020
TAIR9_protein||AT3G52380.1 | Symbols: CP33, PDE322 | CP33; RNA b... 91 5e-019
TAIR9_protein||AT4G39260.1 | Symbols: CCR1, ATGRP8, GR-RBP8, GRP... 84 1e-016
TAIR9_protein||AT4G13850.1 | Symbols: ATGRP2, GR-RBP2, GRP2 | GR... 84 1e-016
TAIR9_protein||AT2G21660.2 | Symbols: ATGRP7, CCR2 | CCR2 (COLD,... 82 2e-016
TAIR9_protein||AT4G13850.2 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-... 80 9e-016
TAIR9_protein||AT1G60000.1 | Symbols: | 29 kDa ribonucleoprotei... 79 2e-015
TAIR9_protein||AT2G21660.1 | Symbols: ATGRP7, CCR2, GR-RBP7, GRP... 79 3e-015
TAIR9_protein||AT4G13850.3 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-... 76 2e-014
TAIR9_protein||AT3G52150.1 | Symbols: | RNA recognition motif (... 75 4e-014
TAIR9_protein||AT3G52150.2 | Symbols: | RNA recognition motif (... 75 4e-014
>TAIR9_protein||AT3G53460.1 | Symbols: CP29 | CP29; RNA binding / poly(U)
binding | chr3:19819738-19821423 REVERSE
Length = 343
Score = 286 bits (730), Expect = 1e-077
Identities = 163/227 (71%), Positives = 175/227 (77%), Gaps = 7/227 (3%)
Frame = +2
Query: 38 RAMSASASSVSLSSFNPKSLLPLCLSRSALKSSSSPAQFPSLFVTHVAVSSDFEVEEDDM 217
R S S SLS L + SALK SSPA++PS FV +VAVSSDFEVEEDDM
Sbjct: 22 RPASVSVLPPSLSFKLHSDHLVSIFASSALK-CSSPAEYPSRFVRNVAVSSDFEVEEDDM 80
Query: 218 FADDDSPPPQERSSFSADLKLFVGNLSFDVESAQLAQLFDSAGNVEMVEVIYDKLTGRSR 397
FAD D P ER+SFS DLKLFVGNLSF+V+SAQLAQLF+SAGNVEMVEVIYDK+TGRSR
Sbjct: 81 FADGDDSAPVERNSFSPDLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSR 140
Query: 398 GFGFVTMSSAPEAEAAAQQFNGYEFEGRPLRVNAGPPPPKGEESFSRGPRSGGYGSER-S 574
GFGFVTMS+A E EAAAQQFNGYEFEGRPLRVNAGPPPPK EESFSRGPRSGGYGSER
Sbjct: 141 GFGFVTMSTAAEVEAAAQQFNGYEFEGRPLRVNAGPPPPKREESFSRGPRSGGYGSERGG 200
Query: 575 GYSSER-SGYGSQRSGRSGYGSER-SSYGS-GSGSGSGSSDRVYVGN 706
GY SER GYGS+R G GYGSER YGS SG G G S R G+
Sbjct: 201 GYGSERGGGYGSERGG--GYGSERGGGYGSQRSGGGYGGSQRSSYGS 245
Score = 79 bits (192), Expect = 4e-015
Identities = 39/84 (46%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Frame = +2
Query: 275 KLFVGNLSFDVESAQLAQLFDSAGNVEMVEVIYDKLTGRSRGFGFVTMSSAPEAEAAAQQ 454
+L+VGNLS+ V+ L LF+ G V VIYD+ +GRS+GFGFVT+SS+ E + A
Sbjct: 258 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 317
Query: 455 FNGYEFEGRPLRVN-AGPPPPKGE 523
NG + +GR +RV+ A PP+G+
Sbjct: 318 LNGADLDGRQIRVSEAEARPPRGQ 341
>TAIR9_protein||AT3G53460.2 | Symbols: CP29 | CP29; RNA binding / poly(U)
binding | chr3:19819738-19821423 REVERSE
Length = 343
Score = 286 bits (730), Expect = 1e-077
Identities = 163/227 (71%), Positives = 175/227 (77%), Gaps = 7/227 (3%)
Frame = +2
Query: 38 RAMSASASSVSLSSFNPKSLLPLCLSRSALKSSSSPAQFPSLFVTHVAVSSDFEVEEDDM 217
R S S SLS L + SALK SSPA++PS FV +VAVSSDFEVEEDDM
Sbjct: 22 RPASVSVLPPSLSFKLHSDHLVSIFASSALK-CSSPAEYPSRFVRNVAVSSDFEVEEDDM 80
Query: 218 FADDDSPPPQERSSFSADLKLFVGNLSFDVESAQLAQLFDSAGNVEMVEVIYDKLTGRSR 397
FAD D P ER+SFS DLKLFVGNLSF+V+SAQLAQLF+SAGNVEMVEVIYDK+TGRSR
Sbjct: 81 FADGDDSAPVERNSFSPDLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSR 140
Query: 398 GFGFVTMSSAPEAEAAAQQFNGYEFEGRPLRVNAGPPPPKGEESFSRGPRSGGYGSER-S 574
GFGFVTMS+A E EAAAQQFNGYEFEGRPLRVNAGPPPPK EESFSRGPRSGGYGSER
Sbjct: 141 GFGFVTMSTAAEVEAAAQQFNGYEFEGRPLRVNAGPPPPKREESFSRGPRSGGYGSERGG 200
Query: 575 GYSSER-SGYGSQRSGRSGYGSER-SSYGS-GSGSGSGSSDRVYVGN 706
GY SER GYGS+R G GYGSER YGS SG G G S R G+
Sbjct: 201 GYGSERGGGYGSERGG--GYGSERGGGYGSQRSGGGYGGSQRSSYGS 245
Score = 79 bits (192), Expect = 4e-015
Identities = 39/84 (46%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Frame = +2
Query: 275 KLFVGNLSFDVESAQLAQLFDSAGNVEMVEVIYDKLTGRSRGFGFVTMSSAPEAEAAAQQ 454
+L+VGNLS+ V+ L LF+ G V VIYD+ +GRS+GFGFVT+SS+ E + A
Sbjct: 258 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 317
Query: 455 FNGYEFEGRPLRVN-AGPPPPKGE 523
NG + +GR +RV+ A PP+G+
Sbjct: 318 LNGADLDGRQIRVSEAEARPPRGQ 341
>TAIR9_protein||AT2G37220.1 | Symbols: | 29 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein cp29, putative | chr2:15634980-15636331
REVERSE
Length = 290
Score = 204 bits (517), Expect = 7e-053
Identities = 127/206 (61%), Positives = 142/206 (68%), Gaps = 23/206 (11%)
Frame = +2
Query: 38 RAMSASASSVSLS-SFNPKSLLPLCLSRSALKSSSSPAQFPSLFVTHVAVSSDFEVEEDD 214
R S S S SLS N S +S S +SPA S F +VA++S+FEVEED
Sbjct: 24 RPASVSLLSPSLSFKLNSDS-----VSFSIAAKWNSPA---SRFARNVAITSEFEVEEDG 75
Query: 215 MFADDDSPPPQERSSFSADLKLFVGNLSFDVESAQLAQLFDSAGNVEMVEVIYDKLTGRS 394
FA D PP+E+ SFSADLKLFVGNL F+V+SAQLAQLF+SAGNVEMVEVIYDK+TGRS
Sbjct: 76 -FA--DVAPPKEQ-SFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRS 131
Query: 395 RGFGFVTMSSAPEAEAAAQQFNGYEFEGRPLRVNAGPPPPKGEESFSRGPRSGGYGSERS 574
RGFGFVTMSS E EAAAQQFNGYE +GRPLRVNAGPPPPK E+ FSRGPRS +GS S
Sbjct: 132 RGFGFVTMSSVSEVEAAAQQFNGYELDGRPLRVNAGPPPPKREDGFSRGPRS-SFGSSGS 190
Query: 575 GYSSERSGYGSQRSGRSGYGSERSSY 652
GY G SG GS Y
Sbjct: 191 GYGG---------GGGSGAGSGNRVY 207
Score = 80 bits (197), Expect = 9e-016
Identities = 38/52 (73%), Positives = 41/52 (78%)
Frame = +2
Query: 602 GSQRSGRSGYGSERSSYGSGSGSGSGSSDRVYVGNLSWGVDDMALESLFSEQ 757
G R RS +GS S YG G GSG+GS +RVYVGNLSWGVDDMALESLFSEQ
Sbjct: 176 GFSRGPRSSFGSSGSGYGGGGGSGAGSGNRVYVGNLSWGVDDMALESLFSEQ 227
>TAIR9_protein||AT4G24770.1 | Symbols: RBP31, ATRBP31, CP31, ATRBP33 | RBP31
(31-KDA RNA BINDING PROTEIN); RNA binding / poly(U) binding |
chr4:12766223-12767952 REVERSE
Length = 330
Score = 101 bits (249), Expect = 9e-022
Identities = 58/118 (49%), Positives = 71/118 (60%), Gaps = 6/118 (5%)
Frame = +2
Query: 203 EEDDMFADDDSPPPQERSSF---SADLKLFVGNLSFDVESAQLAQLFDSAGNVEMVEVIY 373
E D+ D ER+ F S + KLFVGNL++DV S LA LF+ AG VE+ EVIY
Sbjct: 124 EGDESEGDVSEGAVSERAEFPEPSEEAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIY 183
Query: 374 DKLTGRSRGFGFVTMSSAPEAEAAAQQFNGYEFEGRPLRVNAGPPPPKGEESFSRGPR 547
++ T +SRGFGFVTMSS EAE A ++FN Y+ GR L VN P E R PR
Sbjct: 184 NRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPE---RAPR 238
Score = 81 bits (199), Expect = 5e-016
Identities = 42/98 (42%), Positives = 56/98 (57%), Gaps = 2/98 (2%)
Frame = +2
Query: 233 SPPPQERSSFSADLKLFVGNLSFDVESAQLAQLFDSAGNVEMVEVIYDKLTGRSRGFGFV 412
S P + + +++VGNL +DV++ +L QLF G V V+YD+ TGRSRGFGFV
Sbjct: 231 SRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFV 290
Query: 413 TMSSAPEAEAAAQQFNGYEFEGRPLRVNAGP--PPPKG 520
TMS E A +G EGR +RVN PP +G
Sbjct: 291 TMSDVDELNEAISALDGQNLEGRAIRVNVAEERPPRRG 328
>TAIR9_protein||AT5G50250.1 | Symbols: | 31 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein RNP-T, putative / RNA-binding protein
1/2/3, putative / RNA-binding protein cp31, putative |
chr5:20452677-20453965 REVERSE
Length = 290
Score = 96 bits (238), Expect = 2e-020
Identities = 53/106 (50%), Positives = 67/106 (63%), Gaps = 9/106 (8%)
Frame = +2
Query: 200 VEEDDMFADDDS---PPPQERSSFSADLKLFVGNLSFDVESAQLAQLFDSAGNVEMVEVI 370
V D+ F +D P P E + KLFVGNL +DV+S LA LF+ AG VE+ EVI
Sbjct: 92 VTVDESFESEDGVGFPEPPE------EAKLFVGNLPYDVDSQALAMLFEQAGTVEISEVI 145
Query: 371 YDKLTGRSRGFGFVTMSSAPEAEAAAQQFNGYEFEGRPLRVNAGPP 508
Y++ T +SRGFGFVTMS+ EAE A ++FN +E GR L VN P
Sbjct: 146 YNRDTDQSRGFGFVTMSTVEEAEKAVEKFNSFEVNGRRLTVNRAAP 191
>TAIR9_protein||AT3G52380.1 | Symbols: CP33, PDE322 | CP33; RNA binding |
chr3:19421619-19422855 FORWARD
Length = 330
Score = 91 bits (225), Expect = 5e-019
Identities = 48/121 (39%), Positives = 74/121 (61%), Gaps = 1/121 (0%)
Frame = +2
Query: 179 AVSSDFEVEEDDMFADDDSPPPQERSSFSADL-KLFVGNLSFDVESAQLAQLFDSAGNVE 355
+V + EVEE+ +++ ++ + S + +L+VGNL + + S++L+Q+F AG V
Sbjct: 84 SVEEEEEVEEEGDEGEEEVEEEKQTTQASGEEGRLYVGNLPYTITSSELSQIFGEAGTVV 143
Query: 356 MVEVIYDKLTGRSRGFGFVTMSSAPEAEAAAQQFNGYEFEGRPLRVNAGPPPPKGEESFS 535
V+++YDK+T RSRGFGFVTM S EA+ A Q FN + GR ++VN P GE
Sbjct: 144 DVQIVYDKVTDRSRGFGFVTMGSIEEAKEAMQMFNSSQIGGRTVKVNFPEVPRGGENEVM 203
Query: 536 R 538
R
Sbjct: 204 R 204
>TAIR9_protein||AT4G39260.1 | Symbols: CCR1, ATGRP8, GR-RBP8, GRP8 | GR-RBP8;
RNA binding / nucleic acid binding / nucleotide binding |
chr4:18274166-18274958 REVERSE
Length = 170
Score = 84 bits (205), Expect = 1e-016
Identities = 48/135 (35%), Positives = 62/135 (45%)
Frame = +2
Query: 269 DLKLFVGNLSFDVESAQLAQLFDSAGNVEMVEVIYDKLTGRSRGFGFVTMSSAPEAEAAA 448
+ + FVG L++ L + F G+V ++I D+ +GRSRGFGFVT A
Sbjct: 5 EYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAI 64
Query: 449 QQFNGYEFEGRPLRVNAGPPPPKGEESFSRGPRSGGYGSERSGYSSERSGYGSQRSGRSG 628
++ NG E +GR + VN G RG GGY S G S G G G G
Sbjct: 65 EEMNGKELDGRVITVNEAQSRGSGGGGGGRGGSGGGYRSGGGGGYSGGGGGGYSGGGGGG 124
Query: 629 YGSERSSYGSGSGSG 673
Y YGSG G G
Sbjct: 125 YERRSGGYGSGGGGG 139
>TAIR9_protein||AT4G13850.1 | Symbols: ATGRP2, GR-RBP2, GRP2 | GR-RBP2
(GLYCINE-RICH RNA-BINDING PROTEIN 2); ATP binding / RNA binding /
double-stranded DNA binding / single-stranded DNA binding |
chr4:8021314-8022065 FORWARD
Length = 159
Score = 84 bits (205), Expect = 1e-016
Identities = 47/123 (38%), Positives = 60/123 (48%), Gaps = 4/123 (3%)
Frame = +2
Query: 275 KLFVGNLSFDVESAQLAQLFDSAGNVEMVEVIYDKLTGRSRGFGFVTMSSAPEAEAAAQQ 454
KLF+G LS+ + A L F G+V +VI D+ TGRSRGFGFV + A AA +
Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95
Query: 455 FNGYEFEGRPLRVNAGPPPPKGEESFSRG----PRSGGYGSERSGYSSERSGYGSQRSGR 622
+G E GR +RVN P ++ G GGYG GY GYG G
Sbjct: 96 MDGKELNGRHIRVNPANDRPSAPRAYGGGGGYSGGGGGYGGGGGGYGGGGGGYGGGGDGG 155
Query: 623 SGY 631
G+
Sbjct: 156 GGF 158
>TAIR9_protein||AT2G21660.2 | Symbols: ATGRP7, CCR2 | CCR2 (COLD, CIRCADIAN
RHYTHM, AND RNA BINDING 2); RNA binding / double-stranded DNA binding /
single-stranded DNA binding | chr2:9265477-9266316 REVERSE
Length = 160
Score = 82 bits (202), Expect = 2e-016
Identities = 51/146 (34%), Positives = 67/146 (45%), Gaps = 4/146 (2%)
Frame = +2
Query: 254 SSFSADLKLFVGNLSFDVESAQLAQLFDSAGNVEMVEVIYDKLTGRSRGFGFVTMSSAPE 433
+S + + FVG L++ + L F G+V ++I D+ TGRSRGFGFVT
Sbjct: 2 ASGDVEYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKA 61
Query: 434 AEAAAQQFNGYEFEGRPLRVNAGPPPPKGEESFSRGPRSGGYGSER----SGYSSERSGY 601
+ A + NG + +GR + VN G RG S G G R GYS GY
Sbjct: 62 MKDAIEGMNGQDLDGRSITVNEAQSRGSGGGGGHRGGGSYGGGGGRREGGGGYSGGGGGY 121
Query: 602 GSQRSGRSGYGSERSSYGSGSGSGSG 679
S+ G YG R G G G G G
Sbjct: 122 SSRGGGGGSYGGGRREGGGGYGGGEG 147
>TAIR9_protein||AT4G13850.2 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-RICH
RNA-BINDING PROTEIN 2); ATP binding / RNA binding / double-stranded DNA
binding / single-stranded DNA binding | chr4:8021314-8022065 FORWARD
Length = 154
Score = 80 bits (197), Expect = 9e-016
Identities = 47/121 (38%), Positives = 60/121 (49%), Gaps = 5/121 (4%)
Frame = +2
Query: 275 KLFVGNLSFDVESAQLAQLFDSAGNVEMVEVIYDKLTGRSRGFGFVTMSSAPEAEAAAQQ 454
KLF+G LS+ + A L F G+V +VI D+ TGRSRGFGFV + A AA +
Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95
Query: 455 FNGYEFEGRPLRVNAGPPPPKGEESFSRGPRSGG--YGSERSGYSSERSGYGSQRSGRSG 628
+G E GR +RVN P ++ G GG YG GY GYG G G
Sbjct: 96 MDGKELNGRHIRVNPANDRPSAPRAYGGG---GGYSYGGGGGGYGGGGGGYGGGGDGGGG 152
Query: 629 Y 631
+
Sbjct: 153 F 153
>TAIR9_protein||AT1G60000.1 | Symbols: | 29 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein cp29, putative | chr1:22093678-22094540
REVERSE
Length = 259
Score = 79 bits (194), Expect = 2e-015
Identities = 44/115 (38%), Positives = 64/115 (55%), Gaps = 5/115 (4%)
Frame = +2
Query: 182 VSSDFEVEEDDMFADDDSPPPQERSSFSADLKLFVGNLSFDVESAQLAQLFDSAGNVEMV 361
++ E EE D A PP + + KL+ GNL ++V+SA LAQ+ N E+V
Sbjct: 60 ITVKLEEEEKDDGASAVLDPPA-----AVNTKLYFGNLPYNVDSATLAQIIQDFANPELV 114
Query: 362 EVIYDKLTGRSRGFGFVTMSSAPEAEAAAQQFNGYEFEGRPLRVNAGPPPPKGEE 526
EV+Y++ TG+SRGF FVTMS+ + +G E+ GR L+VN P +E
Sbjct: 115 EVLYNRDTGQSRGFAFVTMSNVEDCNIIIDNLDGTEYLGRALKVNFADKPKPNKE 169
Score = 79 bits (192), Expect = 4e-015
Identities = 42/90 (46%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Frame = +2
Query: 230 DSPPPQERSSF-SADLKLFVGNLSFDVESAQLAQLFDSAGNVEMVEVIYDKLTGRSRGFG 406
D P P + + + KLFVGNLS+ V S LA F G+V V++D TGRSRG+G
Sbjct: 162 DKPKPNKEPLYPETEHKLFVGNLSWTVTSESLAGAFRECGDVVGARVVFDGDTGRSRGYG 221
Query: 407 FVTMSSAPEAEAAAQQFNGYEFEGRPLRVN 496
FV SS E E A + +G+E EGR +RVN
Sbjct: 222 FVCYSSKAEMETALESLDGFELEGRAIRVN 251
>TAIR9_protein||AT2G21660.1 | Symbols: ATGRP7, CCR2, GR-RBP7, GRP7 | CCR2 (COLD,
CIRCADIAN RHYTHM, AND RNA BINDING 2); RNA binding / double-stranded DNA
binding / single-stranded DNA binding | chr2:9265477-9266316 REVERSE
Length = 177
Score = 79 bits (193), Expect = 3e-015
Identities = 52/149 (34%), Positives = 68/149 (45%), Gaps = 7/149 (4%)
Frame = +2
Query: 254 SSFSADLKLFVGNLSFDVESAQLAQLFDSAGNVEMVEVIYDKLTGRSRGFGFVTMSSAPE 433
+S + + FVG L++ + L F G+V ++I D+ TGRSRGFGFVT
Sbjct: 2 ASGDVEYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKA 61
Query: 434 AEAAAQQFNGYEFEGRPLRVNAGPPPPKGEESFSRGPRSGGY----GSERSGYSSERSGY 601
+ A + NG + +GR + VN G RG GGY G SG G
Sbjct: 62 MKDAIEGMNGQDLDGRSITVNEAQSRGSGGGGGHRGGGGGGYRSGGGGGYSGGGGSYGGG 121
Query: 602 GSQRSGRSGY---GSERSSYGSGSGSGSG 679
G +R G GY G SS G G GS G
Sbjct: 122 GGRREGGGGYSGGGGGYSSRGGGGGSYGG 150
>TAIR9_protein||AT4G13850.3 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-RICH
RNA-BINDING PROTEIN 2); ATP binding / RNA binding / double-stranded DNA
binding / single-stranded DNA binding | chr4:8021314-8022065 FORWARD
Length = 145
Score = 76 bits (185), Expect = 2e-014
Identities = 43/110 (39%), Positives = 55/110 (50%), Gaps = 3/110 (2%)
Frame = +2
Query: 275 KLFVGNLSFDVESAQLAQLFDSAGNVEMVEVIYDKLTGRSRGFGFVTMSSAPEAEAAAQQ 454
KLF+G LS+ + A L F G+V +VI D+ TGRSRGFGFV + A AA +
Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95
Query: 455 FNGYEFEGRPLRVNAGPPPPKGEESFSRGPRSGGYGSERSGYSSERSGYG 604
+G E GR +RVN P ++ G GGY GY G G
Sbjct: 96 MDGKELNGRHIRVNPANDRPSAPRAYGGG---GGYSGGGGGYGGGGDGGG 142
>TAIR9_protein||AT3G52150.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr3:19342074-19343090 FORWARD
Length = 254
Score = 75 bits (183), Expect = 4e-014
Identities = 53/148 (35%), Positives = 78/148 (52%), Gaps = 6/148 (4%)
Frame = +2
Query: 68 SLSSFNPKSLLPLCLSRSALKSSSSPAQFPSLFVTHVAVSSDFEVEEDDMFADDDSPPPQ 247
++ SF +S PL + SS P FPSL T + SS + ++ P
Sbjct: 14 TIFSFQSESFTPLHTRVNVF--SSKP--FPSLAGT-FSRSSRTRFIPYAVTETEEKPAAL 68
Query: 248 ERSSFSADLKLFVGNLSFDVESAQLAQLFDSAGNVEMVEVIYDKLTGRSRGFGFVTMSSA 427
+ SS A ++++GN+ V + QL +L + G VE V+V+YDK +GRSR FGF TM S
Sbjct: 69 DPSS-EAARRVYIGNIPRTVTNEQLTKLVEEHGAVEKVQVMYDKYSGRSRRFGFATMKSV 127
Query: 428 PEAEAAAQQFNGYEFEGRPLRVNAGPPP 511
+A A ++ NG EGR ++VN P
Sbjct: 128 EDANAVVEKLNGNTVEGREIKVNITEKP 155
>TAIR9_protein||AT3G52150.2 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr3:19342074-19343090 FORWARD
Length = 254
Score = 75 bits (183), Expect = 4e-014
Identities = 53/148 (35%), Positives = 78/148 (52%), Gaps = 6/148 (4%)
Frame = +2
Query: 68 SLSSFNPKSLLPLCLSRSALKSSSSPAQFPSLFVTHVAVSSDFEVEEDDMFADDDSPPPQ 247
++ SF +S PL + SS P FPSL T + SS + ++ P
Sbjct: 14 TIFSFQSESFTPLHTRVNVF--SSKP--FPSLAGT-FSRSSRTRFIPYAVTETEEKPAAL 68
Query: 248 ERSSFSADLKLFVGNLSFDVESAQLAQLFDSAGNVEMVEVIYDKLTGRSRGFGFVTMSSA 427
+ SS A ++++GN+ V + QL +L + G VE V+V+YDK +GRSR FGF TM S
Sbjct: 69 DPSS-EAARRVYIGNIPRTVTNEQLTKLVEEHGAVEKVQVMYDKYSGRSRRFGFATMKSV 127
Query: 428 PEAEAAAQQFNGYEFEGRPLRVNAGPPP 511
+A A ++ NG EGR ++VN P
Sbjct: 128 EDANAVVEKLNGNTVEGREIKVNITEKP 155
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,580,017,805
Number of Sequences: 33410
Number of Extensions: 24580017805
Number of Successful Extensions: 782721444
Number of sequences better than 0.0: 0
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