BLASTX 7.6.2
Query= UN52030 /QuerySize=653
(652 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G63720.1 | Symbols: | EXPRESSED IN: 21 plant ... 236 1e-062
TAIR9_protein||AT5G52430.1 | Symbols: | hydroxyproline-rich gly... 147 6e-036
TAIR9_protein||AT4G25620.1 | Symbols: | hydroxyproline-rich gly... 135 2e-032
TAIR9_protein||AT1G76660.1 | Symbols: | FUNCTIONS IN: molecular... 104 6e-023
>TAIR9_protein||AT1G63720.1 | Symbols: | EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: hydroxyproline-rich glycoprotein family protein
(TAIR:AT5G52430.1); Has 406 Blast hits to 313 proteins in 78 species:
Archae - 0; Bacteria - 2; Metazoa - 123; Fungi - 81; Plants - 111;
Viruses - 14; Other Eukaryotes - 75 (source: NCBI BLink). |
chr1:23636122-23637348 REVERSE
Length = 359
Score = 236 bits (600), Expect = 1e-062
Identities = 125/166 (75%), Positives = 136/166 (81%), Gaps = 18/166 (10%)
Frame = +2
Query: 173 KKRRWWNRFI---CFRPSTQRRKRIGKAALAPEPVPTDS----TSNSGYRSVMTALPFIA 331
KKR+WWNR+ CF S+++RKRIG + L PEPV S TSNSGYRSV+T LPFIA
Sbjct: 36 KKRKWWNRWSLLKCF-GSSRQRKRIGNSVLVPEPVSMSSSNSTTSNSGYRSVITTLPFIA 94
Query: 332 PPSSPASFFQSEPPSATQSPVGILSFSPLPSNSHNNNNNSEERPSIFAIGPYAHEPQLVS 511
PPSSPASFFQSEPPSATQSPVGILSFSPLP N+ RPSIFAIGPYAHE QLVS
Sbjct: 95 PPSSPASFFQSEPPSATQSPVGILSFSPLPCNN---------RPSIFAIGPYAHETQLVS 145
Query: 512 PPVFSTYTTEPSSAPVTPPLDE-SFYLTTTTPSSPEVPFAQLFNSS 646
PPVFSTYTTEPSSAP+TPPLD+ S YLTTTTPSSPEVPFAQLFNS+
Sbjct: 146 PPVFSTYTTEPSSAPITPPLDDSSIYLTTTTPSSPEVPFAQLFNSN 191
>TAIR9_protein||AT5G52430.1 | Symbols: | hydroxyproline-rich glycoprotein
family protein | chr5:21283093-21285045 REVERSE
Length = 439
Score = 147 bits (370), Expect = 6e-036
Identities = 87/189 (46%), Positives = 115/189 (60%), Gaps = 18/189 (9%)
Frame = +2
Query: 101 SIDSFTIDSFVYVTSIKKKKFE*RKKRRW---WNRFICFRPSTQRRKRIGKAALAPEP-- 265
S+++ + VT+ + + +K RW W+ + CF + + KRIG A L PEP
Sbjct: 8 SVETVNAAATAIVTAESRVQPSSSQKGRWGKCWSLYSCF-GTQKNNKRIGNAVLVPEPVT 66
Query: 266 --VPTDSTSNSGYRSVMTALPFIAPPSSPASFFQSEPPSATQSPVGILSFSPLPSNSHNN 439
VP + NS S LPFIAPPSSPASF QS+P S + SPVG LS + +N
Sbjct: 67 SGVPVVTVQNSA-TSTTVVLPFIAPPSSPASFLQSDPSSVSHSPVGPLSLT-------SN 118
Query: 440 NNNSEERPSIFAIGPYAHEPQLVSPPVFSTYTTEPSSAPVTPPLDESFYLTTTTPSSPEV 619
+ +E S+F +GPYA+E Q V+PPVFS + TEPS+AP TPP + S ++ TTPSSPEV
Sbjct: 119 TFSPKEPQSVFTVGPYANETQPVTPPVFSAFITEPSTAPYTPPPESSVHI--TTPSSPEV 176
Query: 620 PFAQLFNSS 646
PFAQL SS
Sbjct: 177 PFAQLLTSS 185
>TAIR9_protein||AT4G25620.1 | Symbols: | hydroxyproline-rich glycoprotein
family protein | chr4:13067447-13069296 REVERSE
Length = 450
Score = 135 bits (339), Expect = 2e-032
Identities = 79/164 (48%), Positives = 96/164 (58%), Gaps = 25/164 (15%)
Frame = +2
Query: 170 RKKRRWWNRFICFRPSTQRRKRIGKAALAPEPVPTDS----TSNSGYRSVMTALPFIAPP 337
+K+ WW+ + CF S + KRIG A L PEP + + NS S +PFIAPP
Sbjct: 33 KKRGSWWSLYWCF-GSKKNNKRIGHAVLVPEPAASGAAVAPVQNSSSNSTSIFMPFIAPP 91
Query: 338 SSPASFFQSEPPSATQSP-VGILSFSPLPSNSHNNNNNSEERPSIFAIGPYAHEPQLVSP 514
SSPASF S PPSA+ +P G+L + E PS F IGPYAHE Q V+P
Sbjct: 92 SSPASFLPSGPPSASHTPDPGLLC-----------SLTVNEPPSAFTIGPYAHETQPVTP 140
Query: 515 PVFSTYTTEPSSAPVTPPLDESFYLTTTTPSSPEVPFAQLFNSS 646
PVFS +TTEPS+AP TPP + +PSSPEVPFAQL SS
Sbjct: 141 PVFSAFTTEPSTAPFTPPPE--------SPSSPEVPFAQLLTSS 176
>TAIR9_protein||AT1G76660.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is:
hydroxyproline-rich glycoprotein family protein (TAIR:AT5G52430.1); Has
280 Blast hits to 160 proteins in 42 species: Archae - 0; Bacteria - 4;
Metazoa - 55; Fungi - 17; Plants - 64; Viruses - 4; Other Eukaryotes -
136 (source: NCBI BLink). | chr1:28769157-28771036 REVERSE
Length = 432
Score = 104 bits (258), Expect = 6e-023
Identities = 60/110 (54%), Positives = 72/110 (65%), Gaps = 11/110 (10%)
Frame = +2
Query: 317 LPFIAPPSSPASFFQSEPPSATQSPVGILSFSPLPSNSHNNNNNSEERPSIFAIGPYAHE 496
L +APPSSPASF S PS TQSP LS L +NS ++ S++A GPYAHE
Sbjct: 66 LSLLAPPSSPASFTNSALPSTTQSPNCYLS---LAANSPGGPSS-----SMYATGPYAHE 117
Query: 497 PQLVSPPVFSTYTTEPSSAPVTPPLDESFYLTTTTPSSPEVPFAQLFNSS 646
QLVSPPVFST+TTEPS+AP TPP + T PSSP+VP+A+ SS
Sbjct: 118 TQLVSPPVFSTFTTEPSTAPFTPPPE---LARLTAPSSPDVPYARFLTSS 164
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,622,283,008
Number of Sequences: 33410
Number of Extensions: 24622283008
Number of Successful Extensions: 782736010
Number of sequences better than 0.0: 0
|
