BLASTX 7.6.2
Query= UN52195 /QuerySize=441
(440 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|15228799|ref|NP_188898.1| RNA pol II accessory factor CDC73-l... 74 4e-012
gi|297830980|ref|XP_002883372.1| predicted protein [Arabidopsis ... 74 4e-012
gi|217073460|gb|ACJ85089.1| unknown [Medicago truncatula] 72 2e-011
gi|255552129|ref|XP_002517109.1| conserved hypothetical protein ... 72 2e-011
gi|225432718|ref|XP_002282888.1| PREDICTED: hypothetical protein... 70 5e-011
gi|297737078|emb|CBI26279.3| unnamed protein product [Vitis vini... 70 5e-011
gi|224111144|ref|XP_002315762.1| PAF1 complex component [Populus... 69 1e-010
gi|224112979|ref|XP_002332677.1| PAF complex protein [Populus tr... 68 2e-010
gi|242033445|ref|XP_002464117.1| hypothetical protein SORBIDRAFT... 63 8e-009
gi|326492766|dbj|BAJ90239.1| predicted protein [Hordeum vulgare ... 62 2e-008
gi|115454475|ref|NP_001050838.1| Os03g0664700 [Oryza sativa Japo... 61 3e-008
gi|222625504|gb|EEE59636.1| hypothetical protein OsJ_12000 [Oryz... 61 3e-008
gi|302811307|ref|XP_002987343.1| hypothetical protein SELMODRAFT... 55 2e-006
>gi|15228799|ref|NP_188898.1| RNA pol II accessory factor CDC73-like protein
[Arabidopsis thaliana]
Length = 415
Score = 74 bits (180), Expect = 4e-012
Identities = 36/36 (100%)
Frame = +3
Query: 171 NVKIISISKNKRHQDRAAALEVWEKLEEFVRSRSHS 278
NVKIISISKNKRHQDRAAALEVWEKLEEFVRSRSHS
Sbjct: 380 NVKIISISKNKRHQDRAAALEVWEKLEEFVRSRSHS 415
>gi|297830980|ref|XP_002883372.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 414
Score = 74 bits (180), Expect = 4e-012
Identities = 36/36 (100%)
Frame = +3
Query: 171 NVKIISISKNKRHQDRAAALEVWEKLEEFVRSRSHS 278
NVKIISISKNKRHQDRAAALEVWEKLEEFVRSRSHS
Sbjct: 379 NVKIISISKNKRHQDRAAALEVWEKLEEFVRSRSHS 414
>gi|217073460|gb|ACJ85089.1| unknown [Medicago truncatula]
Length = 398
Score = 72 bits (174), Expect = 2e-011
Identities = 34/36 (94%), Positives = 36/36 (100%)
Frame = +3
Query: 171 NVKIISISKNKRHQDRAAALEVWEKLEEFVRSRSHS 278
NVKIISISKNKRHQDRAAALEVW++LEEFVRSRSHS
Sbjct: 363 NVKIISISKNKRHQDRAAALEVWDRLEEFVRSRSHS 398
>gi|255552129|ref|XP_002517109.1| conserved hypothetical protein [Ricinus
communis]
Length = 409
Score = 72 bits (174), Expect = 2e-011
Identities = 34/36 (94%), Positives = 36/36 (100%)
Frame = +3
Query: 171 NVKIISISKNKRHQDRAAALEVWEKLEEFVRSRSHS 278
NVKIISISKNKRHQDRAAALEVW++LEEFVRSRSHS
Sbjct: 374 NVKIISISKNKRHQDRAAALEVWDRLEEFVRSRSHS 409
>gi|225432718|ref|XP_002282888.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 413
Score = 70 bits (171), Expect = 5e-011
Identities = 33/36 (91%), Positives = 36/36 (100%)
Frame = +3
Query: 171 NVKIISISKNKRHQDRAAALEVWEKLEEFVRSRSHS 278
NVKIISISKNKRHQDRAAALEVW++LEEFVRSRSH+
Sbjct: 378 NVKIISISKNKRHQDRAAALEVWDRLEEFVRSRSHT 413
>gi|297737078|emb|CBI26279.3| unnamed protein product [Vitis vinifera]
Length = 312
Score = 70 bits (171), Expect = 5e-011
Identities = 33/36 (91%), Positives = 36/36 (100%)
Frame = +3
Query: 171 NVKIISISKNKRHQDRAAALEVWEKLEEFVRSRSHS 278
NVKIISISKNKRHQDRAAALEVW++LEEFVRSRSH+
Sbjct: 277 NVKIISISKNKRHQDRAAALEVWDRLEEFVRSRSHT 312
>gi|224111144|ref|XP_002315762.1| PAF1 complex component [Populus trichocarpa]
Length = 405
Score = 69 bits (167), Expect = 1e-010
Identities = 32/36 (88%), Positives = 36/36 (100%)
Frame = +3
Query: 171 NVKIISISKNKRHQDRAAALEVWEKLEEFVRSRSHS 278
NVKIISISKNKRHQDRAAALEVW++LEEFVRS+SH+
Sbjct: 370 NVKIISISKNKRHQDRAAALEVWDRLEEFVRSQSHT 405
>gi|224112979|ref|XP_002332677.1| PAF complex protein [Populus trichocarpa]
Length = 256
Score = 68 bits (165), Expect = 2e-010
Identities = 35/60 (58%), Positives = 42/60 (70%)
Frame = +3
Query: 99 NLFLTLFSSLSRHQNLSLSLSLSSNVKIISISKNKRHQDRAAALEVWEKLEEFVRSRSHS 278
N + F L S + NVKIISISKNKRH+DRAAALEVW++LEEF+RSRSH+
Sbjct: 197 NKIIGFFMRLEDDSVESAKIVKQWNVKIISISKNKRHKDRAAALEVWDRLEEFMRSRSHT 256
>gi|242033445|ref|XP_002464117.1| hypothetical protein SORBIDRAFT_01g012610
[Sorghum bicolor]
Length = 379
Score = 63 bits (152), Expect = 8e-009
Identities = 29/34 (85%), Positives = 33/34 (97%)
Frame = +3
Query: 171 NVKIISISKNKRHQDRAAALEVWEKLEEFVRSRS 272
NVKIISISKNKRHQDR AALEVWE+LEEF+R+R+
Sbjct: 346 NVKIISISKNKRHQDRTAALEVWERLEEFMRART 379
>gi|326492766|dbj|BAJ90239.1| predicted protein [Hordeum vulgare subsp.
vulgare]
Length = 377
Score = 62 bits (148), Expect = 2e-008
Identities = 28/34 (82%), Positives = 33/34 (97%)
Frame = +3
Query: 171 NVKIISISKNKRHQDRAAALEVWEKLEEFVRSRS 272
NVKIISISKNKRHQDR AALEVW++L+EFVR+R+
Sbjct: 344 NVKIISISKNKRHQDRPAALEVWDRLDEFVRART 377
>gi|115454475|ref|NP_001050838.1| Os03g0664700 [Oryza sativa Japonica Group]
Length = 375
Score = 61 bits (147), Expect = 3e-008
Identities = 28/34 (82%), Positives = 32/34 (94%)
Frame = +3
Query: 171 NVKIISISKNKRHQDRAAALEVWEKLEEFVRSRS 272
NVKIISISKNKRHQDR AALEVWE+LEEF+R+ +
Sbjct: 342 NVKIISISKNKRHQDRTAALEVWERLEEFMRAHT 375
>gi|222625504|gb|EEE59636.1| hypothetical protein OsJ_12000 [Oryza sativa
Japonica Group]
Length = 321
Score = 61 bits (147), Expect = 3e-008
Identities = 28/34 (82%), Positives = 32/34 (94%)
Frame = +3
Query: 171 NVKIISISKNKRHQDRAAALEVWEKLEEFVRSRS 272
NVKIISISKNKRHQDR AALEVWE+LEEF+R+ +
Sbjct: 288 NVKIISISKNKRHQDRTAALEVWERLEEFMRAHT 321
>gi|302811307|ref|XP_002987343.1| hypothetical protein SELMODRAFT_235251
[Selaginella moellendorffii]
Length = 401
Score = 55 bits (132), Expect = 2e-006
Identities = 25/41 (60%), Positives = 33/41 (80%)
Frame = +3
Query: 147 SLSLSLSSNVKIISISKNKRHQDRAAALEVWEKLEEFVRSR 269
S+ + + NVKIIS+SK+KRHQDR A LE W+KL+ FVR+R
Sbjct: 355 SVKVVMQWNVKIISLSKHKRHQDRTAVLEFWDKLDAFVRAR 395
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,595,527,236,032
Number of Sequences: 15229318
Number of Extensions: 5595527236032
Number of Successful Extensions: 1300219324
Number of sequences better than 0.0: 0
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