Library    |     Search    |     Batch query    |     SNP    |     SSR  

TAIR blast output of UN52611


BLASTX 7.6.2

Query= UN52611 /QuerySize=675
        (674 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT3G12080.1 | Symbols: emb2738 | emb2738 (embryo ...    214   6e-056
TAIR9_protein||AT3G12080.2 | Symbols: emb2738 | emb2738 (embryo ...    214   6e-056

>TAIR9_protein||AT3G12080.1 | Symbols: emb2738 | emb2738 (embryo defective
        2738); GTP binding | chr3:3847851-3851980 FORWARD

          Length = 664

 Score =  214 bits (543), Expect = 6e-056
 Identities = 128/188 (68%), Positives = 149/188 (79%), Gaps = 18/188 (9%)
 Frame = +2

Query:  41 MASLLDSLTTRSFFSLPSSIPRISSPLASSPSF-----ASSSLLPP-SVLSYSHQHSH-S 199
           MASLLDSLTTR FF++P SI RI SPLASS S      +SSS++P  SVLSY+HQH H S
Sbjct:   1 MASLLDSLTTRGFFTMP-SISRIYSPLASSTSLTSSPSSSSSIIPSLSVLSYTHQHPHSS 59

Query: 200 RFPYYPVAAAATIDG---QDELEFEEEPEEEEDSYPDESDEEEEEDISIDISILEKEARD 370
           RFP+     AAT+DG   ++EL+FEE  +  ED++ D  D  ++ED SIDIS+LEKEARD
Sbjct:  60 RFPF---LVAATLDGSSAEEELDFEEFDQYAEDNFAD--DYSDDEDDSIDISVLEKEARD 114

Query: 371 IVRDYATTLSRELKLEDDAVVEGKESRRKGKRQAKNNQTQIPEHLLQRVAIVGRPNVGKS 550
           IVRDYATTLSRELK+ED+  +EGKE+RRKGKR AKN Q QIPEHLLQRVAIVGRPNVGKS
Sbjct: 115 IVRDYATTLSRELKIEDE-TIEGKETRRKGKRLAKNTQ-QIPEHLLQRVAIVGRPNVGKS 172

Query: 551 TLFNRLVG 574
            LFNRLVG
Sbjct: 173 ALFNRLVG 180


 Score =  75 bits (184), Expect = 2e-014
 Identities = 40/72 (55%), Positives = 47/72 (65%), Gaps = 5/72 (6%)
 Frame = +3

Query: 459 AKGKPKITRRRYQSIFFKELPSLGGPTSANQHCSTVSLGENKAIVVDEPGVTRDRLYGRS 638
           AK   +I     Q +     P++G     N+      +GEN+AIVVDEPGVTRDRLYGRS
Sbjct: 147 AKNTQQIPEHLLQRVAIVGRPNVGKSALFNR-----LVGENRAIVVDEPGVTRDRLYGRS 201

Query: 639 YWGDQEFVVVDT 674
           YWGDQEFVVVDT
Sbjct: 202 YWGDQEFVVVDT 213

>TAIR9_protein||AT3G12080.2 | Symbols: emb2738 | emb2738 (embryo defective
        2738); GTP binding | chr3:3847851-3851677 FORWARD

          Length = 588

 Score =  214 bits (543), Expect = 6e-056
 Identities = 128/188 (68%), Positives = 149/188 (79%), Gaps = 18/188 (9%)
 Frame = +2

Query:  41 MASLLDSLTTRSFFSLPSSIPRISSPLASSPSF-----ASSSLLPP-SVLSYSHQHSH-S 199
           MASLLDSLTTR FF++P SI RI SPLASS S      +SSS++P  SVLSY+HQH H S
Sbjct:   1 MASLLDSLTTRGFFTMP-SISRIYSPLASSTSLTSSPSSSSSIIPSLSVLSYTHQHPHSS 59

Query: 200 RFPYYPVAAAATIDG---QDELEFEEEPEEEEDSYPDESDEEEEEDISIDISILEKEARD 370
           RFP+     AAT+DG   ++EL+FEE  +  ED++ D  D  ++ED SIDIS+LEKEARD
Sbjct:  60 RFPF---LVAATLDGSSAEEELDFEEFDQYAEDNFAD--DYSDDEDDSIDISVLEKEARD 114

Query: 371 IVRDYATTLSRELKLEDDAVVEGKESRRKGKRQAKNNQTQIPEHLLQRVAIVGRPNVGKS 550
           IVRDYATTLSRELK+ED+  +EGKE+RRKGKR AKN Q QIPEHLLQRVAIVGRPNVGKS
Sbjct: 115 IVRDYATTLSRELKIEDE-TIEGKETRRKGKRLAKNTQ-QIPEHLLQRVAIVGRPNVGKS 172

Query: 551 TLFNRLVG 574
            LFNRLVG
Sbjct: 173 ALFNRLVG 180


 Score =  75 bits (184), Expect = 2e-014
 Identities = 40/72 (55%), Positives = 47/72 (65%), Gaps = 5/72 (6%)
 Frame = +3

Query: 459 AKGKPKITRRRYQSIFFKELPSLGGPTSANQHCSTVSLGENKAIVVDEPGVTRDRLYGRS 638
           AK   +I     Q +     P++G     N+      +GEN+AIVVDEPGVTRDRLYGRS
Sbjct: 147 AKNTQQIPEHLLQRVAIVGRPNVGKSALFNR-----LVGENRAIVVDEPGVTRDRLYGRS 201

Query: 639 YWGDQEFVVVDT 674
           YWGDQEFVVVDT
Sbjct: 202 YWGDQEFVVVDT 213

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,744,391,738
Number of Sequences: 33410
Number of Extensions: 24744391738
Number of Successful Extensions: 787922274
Number of sequences better than 0.0: 0