BLASTX 7.6.2
Query= UN52759 /QuerySize=733
(732 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G71800.1 | Symbols: | cleavage stimulation fa... 396 7e-111
TAIR9_protein||AT5G61030.1 | Symbols: GR-RBP3 | GR-RBP3 (glycine... 61 7e-010
TAIR9_protein||AT1G60900.1 | Symbols: | U2 snRNP auxiliary fact... 60 9e-010
TAIR9_protein||AT3G52660.1 | Symbols: | RNA recognition motif (... 59 2e-009
TAIR9_protein||AT3G52660.2 | Symbols: | RNA recognition motif (... 59 2e-009
TAIR9_protein||AT5G50250.1 | Symbols: | 31 kDa ribonucleoprotei... 59 2e-009
TAIR9_protein||AT1G73840.1 | Symbols: ESP1 | ESP1 (ENHANCED SILE... 59 3e-009
TAIR9_protein||AT4G24770.1 | Symbols: RBP31, ATRBP31, CP31, ATRB... 59 4e-009
TAIR9_protein||AT4G36690.1 | Symbols: ATU2AF65A | ATU2AF65A; RNA... 58 5e-009
TAIR9_protein||AT4G36690.3 | Symbols: ATU2AF65A | ATU2AF65A; RNA... 58 5e-009
TAIR9_protein||AT4G36690.2 | Symbols: ATU2AF65A | ATU2AF65A; RNA... 58 5e-009
TAIR9_protein||AT2G21660.1 | Symbols: ATGRP7, CCR2, GR-RBP7, GRP... 57 1e-008
TAIR9_protein||AT2G21660.2 | Symbols: ATGRP7, CCR2 | CCR2 (COLD,... 57 1e-008
TAIR9_protein||AT3G08000.1 | Symbols: | RNA-binding protein, pu... 57 1e-008
TAIR9_protein||AT4G13850.1 | Symbols: ATGRP2, GR-RBP2, GRP2 | GR... 57 1e-008
TAIR9_protein||AT4G13850.2 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-... 57 1e-008
TAIR9_protein||AT4G13850.3 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-... 57 1e-008
TAIR9_protein||AT1G60000.1 | Symbols: | 29 kDa ribonucleoprotei... 56 2e-008
TAIR9_protein||AT2G43370.1 | Symbols: | U1 small nuclear ribonu... 56 2e-008
TAIR9_protein||AT3G23830.1 | Symbols: GR-RBP4, GRP4 | GRP4 (GLYC... 55 3e-008
>TAIR9_protein||AT1G71800.1 | Symbols: | cleavage stimulation factor, putative
| chr1:26999606-27001850 FORWARD
Length = 462
Score = 396 bits (1017), Expect = 7e-111
Identities = 204/242 (84%), Positives = 217/242 (89%), Gaps = 3/242 (1%)
Frame = +3
Query: 15 SSSSSQRRCVFVGNIPYDATEEQLKEICGEVGPVVSFRLVTDRETGKPKGYGFCEYKDEE 194
+SSSSQRRCVFVGNIPYDATEEQL+EICGEVGPVVSFRLVTDRETGKPKGYGFCEYKDEE
Sbjct: 2 ASSSSQRRCVFVGNIPYDATEEQLREICGEVGPVVSFRLVTDRETGKPKGYGFCEYKDEE 61
Query: 195 TALSARRNLQSYDINGRQL*VDFAENDKGTDKPRDQGQAGTSLPPAVTATDSQKQTGGAV 374
TALSARRNLQSY+INGRQL VDFAENDKGTDK RDQ Q G LP T T+SQKQ GG V
Sbjct: 62 TALSARRNLQSYEINGRQLRVDFAENDKGTDKTRDQSQGGPGLPSTTTVTESQKQIGGPV 121
Query: 375 DLNMHQPVGLNLAMQAASVMAGALGGPQVGS---QSTLQVTASDPLTLHLAKMSRSQLSD 545
D NMHQPVGL+LA AASV+AGALGGPQVGS QS LQV ASDPL LHLAKMSRSQL++
Sbjct: 122 DSNMHQPVGLHLATTAASVIAGALGGPQVGSQFTQSNLQVPASDPLALHLAKMSRSQLTE 181
Query: 546 IISSVKLMATQNKEDARQLLVSRPHLLKSVFLAQIMLGIVSPQVLQTPNIVHAPNHMTRS 725
IISS+KLMATQNKE ARQLLVSRP LLK+VFLAQ+MLGIVSPQVLQ+PNIV AP+HMT S
Sbjct: 182 IISSIKLMATQNKEHARQLLVSRPQLLKAVFLAQVMLGIVSPQVLQSPNIVQAPSHMTGS 241
Query: 726 SI 731
SI
Sbjct: 242 SI 243
>TAIR9_protein||AT5G61030.1 | Symbols: GR-RBP3 | GR-RBP3 (glycine-rich
RNA-binding protein 3); ATP binding / RNA binding |
chr5:24560870-24562152 FORWARD
Length = 310
Score = 61 bits (146), Expect = 7e-010
Identities = 30/79 (37%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Frame = +3
Query: 42 VFVGNIPYDATEEQLKEICGEVGPVVSFRLVTDRETGKPKGYGFCEYKDEETALSARRNL 221
+F+G + Y E+ L+E + G VV R++ DRETG+ +G+GF + E A SA + L
Sbjct: 42 LFIGGMAYSMDEDSLREAFTKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAASSAIQAL 101
Query: 222 QSYDINGRQL*VDFAENDK 278
D++GR + V++A ND+
Sbjct: 102 DGRDLHGRVVKVNYA-NDR 119
>TAIR9_protein||AT1G60900.1 | Symbols: | U2 snRNP auxiliary factor large
subunit, putative | chr1:22424008-22427806 FORWARD
Length = 590
Score = 60 bits (145), Expect = 9e-010
Identities = 26/49 (53%), Positives = 33/49 (67%)
Frame = +3
Query: 42 VFVGNIPYDATEEQLKEICGEVGPVVSFRLVTDRETGKPKGYGFCEYKD 188
+FVG +PY TE Q++E+ GP+ F LV DRETG KGY FC Y+D
Sbjct: 377 IFVGGLPYYFTEVQIRELLESFGPLRGFNLVKDRETGNSKGYAFCVYQD 425
>TAIR9_protein||AT3G52660.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr3:19522598-19524735 FORWARD
Length = 472
Score = 59 bits (142), Expect = 2e-009
Identities = 25/70 (35%), Positives = 42/70 (60%)
Frame = +3
Query: 42 VFVGNIPYDATEEQLKEICGEVGPVVSFRLVTDRETGKPKGYGFCEYKDEETALSARRNL 221
V++G IP DATE LK CG +G V R++ ++++G KGY F ++ ++ A A L
Sbjct: 94 VYLGGIPTDATEGDLKGFCGSIGEVTEVRIMREKDSGDGKGYAFVTFRSKDLAAEAIDTL 153
Query: 222 QSYDINGRQL 251
+ D G+++
Sbjct: 154 NNTDFRGKRI 163
>TAIR9_protein||AT3G52660.2 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr3:19522598-19524735 FORWARD
Length = 472
Score = 59 bits (142), Expect = 2e-009
Identities = 25/70 (35%), Positives = 42/70 (60%)
Frame = +3
Query: 42 VFVGNIPYDATEEQLKEICGEVGPVVSFRLVTDRETGKPKGYGFCEYKDEETALSARRNL 221
V++G IP DATE LK CG +G V R++ ++++G KGY F ++ ++ A A L
Sbjct: 94 VYLGGIPTDATEGDLKGFCGSIGEVTEVRIMREKDSGDGKGYAFVTFRSKDLAAEAIDTL 153
Query: 222 QSYDINGRQL 251
+ D G+++
Sbjct: 154 NNTDFRGKRI 163
>TAIR9_protein||AT5G50250.1 | Symbols: | 31 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein RNP-T, putative / RNA-binding protein
1/2/3, putative / RNA-binding protein cp31, putative |
chr5:20452677-20453965 REVERSE
Length = 290
Score = 59 bits (142), Expect = 2e-009
Identities = 28/76 (36%), Positives = 46/76 (60%)
Frame = +3
Query: 42 VFVGNIPYDATEEQLKEICGEVGPVVSFRLVTDRETGKPKGYGFCEYKDEETALSARRNL 221
++VGN+P+D +L+ + E G VV R+V+DRETG+ +G+GF + +E A L
Sbjct: 209 IYVGNLPWDVDSGRLERLFSEHGKVVDARVVSDRETGRSRGFGFVQMSNENEVNVAIAAL 268
Query: 222 QSYDINGRQL*VDFAE 269
++ GR + V+ AE
Sbjct: 269 DGQNLEGRAIKVNVAE 284
>TAIR9_protein||AT1G73840.1 | Symbols: ESP1 | ESP1 (ENHANCED SILENCING PHENOTYPE
1) | chr1:27763937-27766328 REVERSE
Length = 389
Score = 59 bits (141), Expect = 3e-009
Identities = 31/72 (43%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Frame = +3
Query: 480 QVTASDPLTLHLAKMSRSQLSDIISSVKLMATQNKEDARQLLVSRPHLLKSVFLAQIMLG 659
Q+ L +LA M++SQL DI+S +K + QN + AR++L+ P L K++F AQIMLG
Sbjct: 5 QIGGDGGLPANLAGMTKSQLYDIMSQMKTLIDQNHQQAREILIRNPLLTKALFQAQIMLG 64
Query: 660 IVSPQVLQTPNI 695
+V P + TP +
Sbjct: 65 MVQPPQV-TPKV 75
>TAIR9_protein||AT4G24770.1 | Symbols: RBP31, ATRBP31, CP31, ATRBP33 | RBP31
(31-KDA RNA BINDING PROTEIN); RNA binding / poly(U) binding |
chr4:12766223-12767952 REVERSE
Length = 330
Score = 59 bits (140), Expect = 4e-009
Identities = 29/76 (38%), Positives = 45/76 (59%)
Frame = +3
Query: 42 VFVGNIPYDATEEQLKEICGEVGPVVSFRLVTDRETGKPKGYGFCEYKDEETALSARRNL 221
V+VGN+P+D +L+++ E G VV R+V DRETG+ +G+GF D + A L
Sbjct: 246 VYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISAL 305
Query: 222 QSYDINGRQL*VDFAE 269
++ GR + V+ AE
Sbjct: 306 DGQNLEGRAIRVNVAE 321
>TAIR9_protein||AT4G36690.1 | Symbols: ATU2AF65A | ATU2AF65A; RNA binding /
nucleic acid binding / nucleotide binding | chr4:17294139-17297609
REVERSE
Length = 574
Score = 58 bits (139), Expect = 5e-009
Identities = 32/87 (36%), Positives = 42/87 (48%)
Frame = +3
Query: 42 VFVGNIPYDATEEQLKEICGEVGPVVSFRLVTDRETGKPKGYGFCEYKDEETALSARRNL 221
+FVG +PY TE Q++E+ G + F LV DRETG KGY FC Y+D A L
Sbjct: 361 IFVGGLPYYFTESQVRELLESFGGLKGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 420
Query: 222 QSYDINGRQL*VDFAENDKGTDKPRDQ 302
+ + L V A KP +
Sbjct: 421 NGIKMGDKTLTVRRANQGTMLQKPEQE 447
>TAIR9_protein||AT4G36690.3 | Symbols: ATU2AF65A | ATU2AF65A; RNA binding /
nucleic acid binding / nucleotide binding | chr4:17294422-17297609
REVERSE
Length = 566
Score = 58 bits (139), Expect = 5e-009
Identities = 32/87 (36%), Positives = 42/87 (48%)
Frame = +3
Query: 42 VFVGNIPYDATEEQLKEICGEVGPVVSFRLVTDRETGKPKGYGFCEYKDEETALSARRNL 221
+FVG +PY TE Q++E+ G + F LV DRETG KGY FC Y+D A L
Sbjct: 361 IFVGGLPYYFTESQVRELLESFGGLKGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 420
Query: 222 QSYDINGRQL*VDFAENDKGTDKPRDQ 302
+ + L V A KP +
Sbjct: 421 NGIKMGDKTLTVRRANQGTMLQKPEQE 447
>TAIR9_protein||AT4G36690.2 | Symbols: ATU2AF65A | ATU2AF65A; RNA binding /
nucleic acid binding / nucleotide binding | chr4:17294591-17297609
REVERSE
Length = 543
Score = 58 bits (139), Expect = 5e-009
Identities = 32/87 (36%), Positives = 42/87 (48%)
Frame = +3
Query: 42 VFVGNIPYDATEEQLKEICGEVGPVVSFRLVTDRETGKPKGYGFCEYKDEETALSARRNL 221
+FVG +PY TE Q++E+ G + F LV DRETG KGY FC Y+D A L
Sbjct: 361 IFVGGLPYYFTESQVRELLESFGGLKGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAAL 420
Query: 222 QSYDINGRQL*VDFAENDKGTDKPRDQ 302
+ + L V A KP +
Sbjct: 421 NGIKMGDKTLTVRRANQGTMLQKPEQE 447
>TAIR9_protein||AT2G21660.1 | Symbols: ATGRP7, CCR2, GR-RBP7, GRP7 | CCR2 (COLD,
CIRCADIAN RHYTHM, AND RNA BINDING 2); RNA binding / double-stranded DNA
binding / single-stranded DNA binding | chr2:9265477-9266316 REVERSE
Length = 177
Score = 57 bits (136), Expect = 1e-008
Identities = 26/86 (30%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Frame = +3
Query: 15 SSSSSQRRCVFVGNIPYDATEEQLKEICGEVGPVVSFRLVTDRETGKPKGYGFCEYKDEE 194
+S + RC FVG + + + L+ + G V+ +++ DRETG+ +G+GF +KDE+
Sbjct: 2 ASGDVEYRC-FVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEK 60
Query: 195 TALSARRNLQSYDINGRQL*VDFAEN 272
A + D++GR + V+ A++
Sbjct: 61 AMKDAIEGMNGQDLDGRSITVNEAQS 86
>TAIR9_protein||AT2G21660.2 | Symbols: ATGRP7, CCR2 | CCR2 (COLD, CIRCADIAN
RHYTHM, AND RNA BINDING 2); RNA binding / double-stranded DNA binding /
single-stranded DNA binding | chr2:9265477-9266316 REVERSE
Length = 160
Score = 57 bits (136), Expect = 1e-008
Identities = 26/86 (30%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Frame = +3
Query: 15 SSSSSQRRCVFVGNIPYDATEEQLKEICGEVGPVVSFRLVTDRETGKPKGYGFCEYKDEE 194
+S + RC FVG + + + L+ + G V+ +++ DRETG+ +G+GF +KDE+
Sbjct: 2 ASGDVEYRC-FVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEK 60
Query: 195 TALSARRNLQSYDINGRQL*VDFAEN 272
A + D++GR + V+ A++
Sbjct: 61 AMKDAIEGMNGQDLDGRSITVNEAQS 86
>TAIR9_protein||AT3G08000.1 | Symbols: | RNA-binding protein, putative |
chr3:2555034-2555829 REVERSE
Length = 144
Score = 57 bits (136), Expect = 1e-008
Identities = 27/85 (31%), Positives = 48/85 (56%)
Frame = +3
Query: 12 SSSSSSQRRCVFVGNIPYDATEEQLKEICGEVGPVVSFRLVTDRETGKPKGYGFCEYKDE 191
+SSS+S +F+G + + E+ LK+ G V R+ D+ +G+ +G+GF ++ +E
Sbjct: 33 TSSSASPSSKLFIGGLSWSVDEQSLKDAFSSFGEVAEVRIAYDKGSGRSRGFGFVDFAEE 92
Query: 192 ETALSARRNLQSYDINGRQL*VDFA 266
ALSA+ + + GR L + FA
Sbjct: 93 GDALSAKDAMDGKGLLGRPLRISFA 117
>TAIR9_protein||AT4G13850.1 | Symbols: ATGRP2, GR-RBP2, GRP2 | GR-RBP2
(GLYCINE-RICH RNA-BINDING PROTEIN 2); ATP binding / RNA binding /
double-stranded DNA binding / single-stranded DNA binding |
chr4:8021314-8022065 FORWARD
Length = 159
Score = 57 bits (136), Expect = 1e-008
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Frame = +3
Query: 42 VFVGNIPYDATEEQLKEICGEVGPVVSFRLVTDRETGKPKGYGFCEYKDEETALSARRNL 221
+F+G + + + L++ G VV +++ DRETG+ +G+GF + DE A +A +
Sbjct: 37 LFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEM 96
Query: 222 QSYDINGRQL*VDFAENDKGTDKPRDQGQAG 314
++NGR + V+ A ND+ PR G G
Sbjct: 97 DGKELNGRHIRVNPA-NDR-PSAPRAYGGGG 125
>TAIR9_protein||AT4G13850.2 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-RICH
RNA-BINDING PROTEIN 2); ATP binding / RNA binding / double-stranded DNA
binding / single-stranded DNA binding | chr4:8021314-8022065 FORWARD
Length = 154
Score = 57 bits (136), Expect = 1e-008
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Frame = +3
Query: 42 VFVGNIPYDATEEQLKEICGEVGPVVSFRLVTDRETGKPKGYGFCEYKDEETALSARRNL 221
+F+G + + + L++ G VV +++ DRETG+ +G+GF + DE A +A +
Sbjct: 37 LFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEM 96
Query: 222 QSYDINGRQL*VDFAENDKGTDKPRDQGQAG 314
++NGR + V+ A ND+ PR G G
Sbjct: 97 DGKELNGRHIRVNPA-NDR-PSAPRAYGGGG 125
>TAIR9_protein||AT4G13850.3 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-RICH
RNA-BINDING PROTEIN 2); ATP binding / RNA binding / double-stranded DNA
binding / single-stranded DNA binding | chr4:8021314-8022065 FORWARD
Length = 145
Score = 57 bits (136), Expect = 1e-008
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Frame = +3
Query: 42 VFVGNIPYDATEEQLKEICGEVGPVVSFRLVTDRETGKPKGYGFCEYKDEETALSARRNL 221
+F+G + + + L++ G VV +++ DRETG+ +G+GF + DE A +A +
Sbjct: 37 LFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEM 96
Query: 222 QSYDINGRQL*VDFAENDKGTDKPRDQGQAG 314
++NGR + V+ A ND+ PR G G
Sbjct: 97 DGKELNGRHIRVNPA-NDR-PSAPRAYGGGG 125
>TAIR9_protein||AT1G60000.1 | Symbols: | 29 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein cp29, putative | chr1:22093678-22094540
REVERSE
Length = 259
Score = 56 bits (134), Expect = 2e-008
Identities = 28/79 (35%), Positives = 44/79 (55%)
Frame = +3
Query: 42 VFVGNIPYDATEEQLKEICGEVGPVVSFRLVTDRETGKPKGYGFCEYKDEETALSARRNL 221
+FVGN+ + T E L E G VV R+V D +TG+ +GYGF Y + +A +L
Sbjct: 179 LFVGNLSWTVTSESLAGAFRECGDVVGARVVFDGDTGRSRGYGFVCYSSKAEMETALESL 238
Query: 222 QSYDINGRQL*VDFAENDK 278
+++ GR + V+ A+ K
Sbjct: 239 DGFELEGRAIRVNLAQGKK 257
>TAIR9_protein||AT2G43370.1 | Symbols: | U1 small nuclear ribonucleoprotein 70
kDa, putative | chr2:18013431-18015376 FORWARD
Length = 334
Score = 56 bits (133), Expect = 2e-008
Identities = 27/74 (36%), Positives = 44/74 (59%)
Frame = +3
Query: 42 VFVGNIPYDATEEQLKEICGEVGPVVSFRLVTDRETGKPKGYGFCEYKDEETALSARRNL 221
+FVG + + TE+ L+E+ + G + + RLV TG +GYGF EY+ E+ L A +
Sbjct: 66 LFVGRLSHHTTEDTLREVMSKYGRIKNLRLVRHIVTGASRGYGFVEYETEKEMLRAYEDA 125
Query: 222 QSYDINGRQL*VDF 263
I+GR++ VD+
Sbjct: 126 HHSLIDGREIIVDY 139
>TAIR9_protein||AT3G23830.1 | Symbols: GR-RBP4, GRP4 | GRP4 (GLYCINE-RICH
RNA-BINDING PROTEIN 4); RNA binding / double-stranded DNA binding /
single-stranded DNA binding | chr3:8606762-8607677 REVERSE
Length = 137
Score = 55 bits (132), Expect = 3e-008
Identities = 26/91 (28%), Positives = 47/91 (51%)
Frame = +3
Query: 42 VFVGNIPYDATEEQLKEICGEVGPVVSFRLVTDRETGKPKGYGFCEYKDEETALSARRNL 221
+FVG + + + LK+ G V ++ DRETG+ +G+GF + E++A +A + +
Sbjct: 37 LFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAIKEM 96
Query: 222 QSYDINGRQL*VDFAENDKGTDKPRDQGQAG 314
++NGRQ+ V+ A + G G
Sbjct: 97 DGKELNGRQIRVNLATERSSAPRSSFGGGGG 127
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,832,584,672
Number of Sequences: 33410
Number of Extensions: 24832584672
Number of Successful Extensions: 793144659
Number of sequences better than 0.0: 0
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