BLASTX 7.6.2
Query= UN52801 /QuerySize=629
(628 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G37720.1 | Symbols: | RNA and export factor-b... 119 1e-027
TAIR9_protein||AT5G37720.2 | Symbols: | RNA and export factor-b... 119 1e-027
TAIR9_protein||AT1G66260.1 | Symbols: | RNA and export factor-b... 116 1e-026
>TAIR9_protein||AT5G37720.1 | Symbols: | RNA and export factor-binding protein,
putative | chr5:14981805-14983978 REVERSE
Length = 289
Score = 119 bits (298), Expect = 1e-027
Identities = 63/90 (70%), Positives = 69/90 (76%), Gaps = 4/90 (4%)
Frame = +3
Query: 210 RGTSRRGGGGRRDHGPNGFLGGGGGRGNGPARRGPLAVNSRTSSFTINKPVRRTRSVPWQ 389
RG + R GG G G GGGGRG GPARRGPLAVN+R SSFTINKPVRR RS+PWQ
Sbjct: 15 RGKTARSGGRGISRG-RGRGRGGGGRGAGPARRGPLAVNARPSSFTINKPVRRVRSLPWQ 73
Query: 390 TGLFEDGLRAA---GVDVETRLHITNLDSG 470
+GLFEDGLRAA GV+V TRLH+TNLD G
Sbjct: 74 SGLFEDGLRAAGASGVEVGTRLHVTNLDQG 103
Score = 77 bits (187), Expect = 1e-014
Identities = 36/41 (87%)
Frame = +3
Query: 468 GGRGRGGGGGRGNGKKPVEKSAADLDKDRESYHADAMNTS* 590
G GRG GGGRGNGKKPVEKSAADLDKD ESYHADAMNTS*
Sbjct: 249 GNGGRGRGGGRGNGKKPVEKSAADLDKDLESYHADAMNTS* 289
Score = 51 bits (120), Expect = 6e-007
Identities = 26/39 (66%), Positives = 29/39 (74%), Gaps = 5/39 (12%)
Frame = +3
Query: 141 MSGGLDMTLDESIKRAKAAKSGGRGTSR-----RGGGGR 242
MSG L+MTLDE +KR K A+SGGRG SR RGGGGR
Sbjct: 1 MSGALNMTLDEIVKRGKTARSGGRGISRGRGRGRGGGGR 39
>TAIR9_protein||AT5G37720.2 | Symbols: | RNA and export factor-binding protein,
putative | chr5:14981805-14983978 REVERSE
Length = 281
Score = 119 bits (298), Expect = 1e-027
Identities = 63/90 (70%), Positives = 69/90 (76%), Gaps = 4/90 (4%)
Frame = +3
Query: 210 RGTSRRGGGGRRDHGPNGFLGGGGGRGNGPARRGPLAVNSRTSSFTINKPVRRTRSVPWQ 389
RG + R GG G G GGGGRG GPARRGPLAVN+R SSFTINKPVRR RS+PWQ
Sbjct: 15 RGKTARSGGRGISRG-RGRGRGGGGRGAGPARRGPLAVNARPSSFTINKPVRRVRSLPWQ 73
Query: 390 TGLFEDGLRAA---GVDVETRLHITNLDSG 470
+GLFEDGLRAA GV+V TRLH+TNLD G
Sbjct: 74 SGLFEDGLRAAGASGVEVGTRLHVTNLDQG 103
Score = 77 bits (187), Expect = 1e-014
Identities = 36/41 (87%)
Frame = +3
Query: 468 GGRGRGGGGGRGNGKKPVEKSAADLDKDRESYHADAMNTS* 590
G GRG GGGRGNGKKPVEKSAADLDKD ESYHADAMNTS*
Sbjct: 241 GNGGRGRGGGRGNGKKPVEKSAADLDKDLESYHADAMNTS* 281
Score = 51 bits (120), Expect = 6e-007
Identities = 26/39 (66%), Positives = 29/39 (74%), Gaps = 5/39 (12%)
Frame = +3
Query: 141 MSGGLDMTLDESIKRAKAAKSGGRGTSR-----RGGGGR 242
MSG L+MTLDE +KR K A+SGGRG SR RGGGGR
Sbjct: 1 MSGALNMTLDEIVKRGKTARSGGRGISRGRGRGRGGGGR 39
>TAIR9_protein||AT1G66260.1 | Symbols: | RNA and export factor-binding protein,
putative | chr1:24695895-24697883 REVERSE
Length = 296
Score = 116 bits (290), Expect = 1e-026
Identities = 69/121 (57%), Positives = 87/121 (71%), Gaps = 15/121 (12%)
Frame = +3
Query: 141 MSGGLDMTLDESIKRAK-----AAKSGGRGTSRRGGGGRRDHGPNGFLGGGGGRGNGPAR 305
MS L+MTLDE +K++K AA+SGG+G SR+ G GR GPNG + GGGRG GP R
Sbjct: 1 MSDALNMTLDEIVKKSKSERSAAARSGGKGVSRKSGRGR--GGPNGVV--GGGRGGGPVR 56
Query: 306 RGPLAVNSR-TSSFTINKPVRRTRSVPW--QTGLFEDGLRA---AGVDVETRLHITNLDS 467
RGPLAVN+R +SSF+INK RR RS+PW Q L+E+ LRA +GV+V T ++ITNLD
Sbjct: 57 RGPLAVNTRPSSSFSINKLARRKRSLPWQNQNDLYEETLRAVGVSGVEVGTTVYITNLDQ 116
Query: 468 G 470
G
Sbjct: 117 G 117
Score = 70 bits (169), Expect = 1e-012
Identities = 35/46 (76%), Positives = 36/46 (78%), Gaps = 6/46 (13%)
Frame = +3
Query: 471 GRGRGGGGGRGN------GKKPVEKSAADLDKDRESYHADAMNTS* 590
GRGRG GGGRGN GKKPVEKSAADLDKD ESYHA+AMN S*
Sbjct: 251 GRGRGNGGGRGNKSGGRGGKKPVEKSAADLDKDLESYHAEAMNIS* 296
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,832,584,672
Number of Sequences: 33410
Number of Extensions: 24832584672
Number of Successful Extensions: 793144659
Number of sequences better than 0.0: 0
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