BLASTX 7.6.2
Query= UN52844 /QuerySize=759
(758 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|227202572|dbj|BAH56759.1| AT3G52120 [Arabidopsis thaliana] 99 4e-019
gi|18409491|ref|NP_566957.1| Splicing factor 4-like protein [Ara... 88 1e-015
gi|4678941|emb|CAB41332.1| gamma response I protein [Arabidopsis... 88 1e-015
gi|186510957|ref|NP_001118822.1| Splicing factor 4-like protein ... 88 1e-015
gi|297816486|ref|XP_002876126.1| hypothetical protein ARALYDRAFT... 85 9e-015
gi|255647539|gb|ACU24233.1| unknown [Glycine max] 69 8e-010
gi|255544254|ref|XP_002513189.1| arginine/serine rich splicing f... 64 3e-008
gi|168480803|gb|ACA24495.1| gamma reponse I-like protein [Cucumi... 62 6e-008
gi|224055253|ref|XP_002298445.1| predicted protein [Populus tric... 57 2e-006
gi|224106045|ref|XP_002314024.1| predicted protein [Populus tric... 57 2e-006
>gi|227202572|dbj|BAH56759.1| AT3G52120 [Arabidopsis thaliana]
Length = 180
Score = 99 bits (246), Expect = 4e-019
Identities = 57/96 (59%), Positives = 69/96 (71%), Gaps = 10/96 (10%)
Frame = +1
Query: 292 RLPLGLRPM-MPRKGGKLAFSLKQKSKLLAPPVKLG--EEEDEEDVQNDQSFGSAKRPKL 462
++ +GL+P +KGGKLAFSLKQKSKLLAPPVKLG E+ED+EDV+++Q FGS KR KL
Sbjct: 55 KISIGLKPNDAQKKGGKLAFSLKQKSKLLAPPVKLGTEEDEDDEDVKHEQGFGSVKRQKL 114
Query: 463 ---DAPAKSTKLSDVVVGNGCLYSRKYVYMSWWVFC 561
D P KS K+SD VGN CLY KY+ W C
Sbjct: 115 EQRDTPVKSAKVSD--VGNACLY--KYLCSLWKFLC 146
Score = 81 bits (199), Expect = 1e-013
Identities = 49/71 (69%), Positives = 53/71 (74%), Gaps = 11/71 (15%)
Frame = +3
Query: 129 PPSIFVNDGSFMERFRQLQQEKKDEAKDK---APESKPVKIIISGVSNPKPSSSSATKTS 299
PPSIFVNDGSFMERFRQLQQE KD+ KDK +SKPVKII SNPKP +A K S
Sbjct: 6 PPSIFVNDGSFMERFRQLQQE-KDKDKDKVVQVEDSKPVKII----SNPKP---AANKIS 57
Query: 300 IGFKTNDAQKR 332
IG K NDAQK+
Sbjct: 58 IGLKPNDAQKK 68
>gi|18409491|ref|NP_566957.1| Splicing factor 4-like protein [Arabidopsis
thaliana]
Length = 443
Score = 88 bits (216), Expect = 1e-015
Identities = 48/75 (64%), Positives = 59/75 (78%), Gaps = 6/75 (8%)
Frame = +1
Query: 292 RLPLGLRPM-MPRKGGKLAFSLKQKSKLLAPPVKLG--EEEDEEDVQNDQSFGSAKRPKL 462
++ +GL+P +KGGKLAFSLKQKSKLLAPPVKLG E+ED+EDV+++Q FGS KR KL
Sbjct: 55 KISIGLKPNDAQKKGGKLAFSLKQKSKLLAPPVKLGTEEDEDDEDVKHEQGFGSVKRQKL 114
Query: 463 ---DAPAKSTKLSDV 498
D P KS K+SDV
Sbjct: 115 EQRDTPVKSAKVSDV 129
Score = 81 bits (199), Expect = 1e-013
Identities = 49/71 (69%), Positives = 53/71 (74%), Gaps = 11/71 (15%)
Frame = +3
Query: 129 PPSIFVNDGSFMERFRQLQQEKKDEAKDK---APESKPVKIIISGVSNPKPSSSSATKTS 299
PPSIFVNDGSFMERFRQLQQE KD+ KDK +SKPVKII SNPKP +A K S
Sbjct: 6 PPSIFVNDGSFMERFRQLQQE-KDKDKDKVVQVEDSKPVKII----SNPKP---AANKIS 57
Query: 300 IGFKTNDAQKR 332
IG K NDAQK+
Sbjct: 58 IGLKPNDAQKK 68
>gi|4678941|emb|CAB41332.1| gamma response I protein [Arabidopsis thaliana]
Length = 1110
Score = 88 bits (216), Expect = 1e-015
Identities = 48/75 (64%), Positives = 59/75 (78%), Gaps = 6/75 (8%)
Frame = +1
Query: 292 RLPLGLRPM-MPRKGGKLAFSLKQKSKLLAPPVKLG--EEEDEEDVQNDQSFGSAKRPKL 462
++ +GL+P +KGGKLAFSLKQKSKLLAPPVKLG E+ED+EDV+++Q FGS KR KL
Sbjct: 707 KISIGLKPNDAQKKGGKLAFSLKQKSKLLAPPVKLGTEEDEDDEDVKHEQGFGSVKRQKL 766
Query: 463 ---DAPAKSTKLSDV 498
D P KS K+SDV
Sbjct: 767 EQRDTPVKSAKVSDV 781
Score = 87 bits (215), Expect = 2e-015
Identities = 55/83 (66%), Positives = 60/83 (72%), Gaps = 15/83 (18%)
Frame = +3
Query: 93 VLGMDKGAPPPPPPSIFVNDGSFMERFRQLQQEKKDEAKDK---APESKPVKIIISGVSN 263
+L MDKGA PPSIFVNDGSFMERFRQLQQE KD+ KDK +SKPVKII SN
Sbjct: 650 LLAMDKGA----PPSIFVNDGSFMERFRQLQQE-KDKDKDKVVQVEDSKPVKII----SN 700
Query: 264 PKPSSSSATKTSIGFKTNDAQKR 332
PKP +A K SIG K NDAQK+
Sbjct: 701 PKP---AANKISIGLKPNDAQKK 720
>gi|186510957|ref|NP_001118822.1| Splicing factor 4-like protein [Arabidopsis
thaliana]
Length = 414
Score = 88 bits (216), Expect = 1e-015
Identities = 48/75 (64%), Positives = 59/75 (78%), Gaps = 6/75 (8%)
Frame = +1
Query: 292 RLPLGLRPM-MPRKGGKLAFSLKQKSKLLAPPVKLG--EEEDEEDVQNDQSFGSAKRPKL 462
++ +GL+P +KGGKLAFSLKQKSKLLAPPVKLG E+ED+EDV+++Q FGS KR KL
Sbjct: 55 KISIGLKPNDAQKKGGKLAFSLKQKSKLLAPPVKLGTEEDEDDEDVKHEQGFGSVKRQKL 114
Query: 463 ---DAPAKSTKLSDV 498
D P KS K+SDV
Sbjct: 115 EQRDTPVKSAKVSDV 129
Score = 81 bits (199), Expect = 1e-013
Identities = 49/71 (69%), Positives = 53/71 (74%), Gaps = 11/71 (15%)
Frame = +3
Query: 129 PPSIFVNDGSFMERFRQLQQEKKDEAKDK---APESKPVKIIISGVSNPKPSSSSATKTS 299
PPSIFVNDGSFMERFRQLQQE KD+ KDK +SKPVKII SNPKP +A K S
Sbjct: 6 PPSIFVNDGSFMERFRQLQQE-KDKDKDKVVQVEDSKPVKII----SNPKP---AANKIS 57
Query: 300 IGFKTNDAQKR 332
IG K NDAQK+
Sbjct: 58 IGLKPNDAQKK 68
>gi|297816486|ref|XP_002876126.1| hypothetical protein ARALYDRAFT_323761
[Arabidopsis lyrata subsp. lyrata]
Length = 1114
Score = 85 bits (209), Expect = 9e-015
Identities = 45/63 (71%), Positives = 51/63 (80%), Gaps = 5/63 (7%)
Frame = +1
Query: 325 RKGGKLAFSLKQKSKLLAPPVKLG--EEEDEEDVQNDQSFGSAKRPKL---DAPAKSTKL 489
+KGGKLAFSLKQKSKLLAPPVKLG E+EDEED +N+Q FGS KR KL D P KS ++
Sbjct: 726 KKGGKLAFSLKQKSKLLAPPVKLGTEEDEDEEDARNEQGFGSVKRQKLEQRDTPVKSARV 785
Query: 490 SDV 498
SDV
Sbjct: 786 SDV 788
Score = 85 bits (209), Expect = 9e-015
Identities = 54/79 (68%), Positives = 58/79 (73%), Gaps = 15/79 (18%)
Frame = +3
Query: 105 DKGAPPPPPPSIFVNDGSFMERFRQLQQEKKDEAKDK---APESKPVKIIISGVSNPKPS 275
+KGA PPSIFVNDGSFMERFRQLQQE KD+ KDK +SKPVKII SNPKP
Sbjct: 661 NKGA----PPSIFVNDGSFMERFRQLQQE-KDKDKDKVVQVEDSKPVKII----SNPKP- 710
Query: 276 SSSATKTSIGFKTNDAQKR 332
SA K SIG KTNDAQK+
Sbjct: 711 --SANKISIGLKTNDAQKK 727
>gi|255647539|gb|ACU24233.1| unknown [Glycine max]
Length = 433
Score = 69 bits (166), Expect = 8e-010
Identities = 36/67 (53%), Positives = 46/67 (68%), Gaps = 4/67 (5%)
Frame = +3
Query: 129 PPSIFVNDGSFMERFRQLQQEKKDEAKDKAPESKPVKIIISGVSNPKPSSSSATKTSIGF 308
PPS+FVNDGSFMERF+QL+QE+ K +SKP+K +ISG +P P S TKT +
Sbjct: 6 PPSLFVNDGSFMERFKQLRQEQDKGKNVKLEDSKPIK-VISGSLSPNP---SFTKTPVDL 61
Query: 309 KTNDAQK 329
K ND +K
Sbjct: 62 KVNDTRK 68
>gi|255544254|ref|XP_002513189.1| arginine/serine rich splicing factor sf4/14,
putative [Ricinus communis]
Length = 441
Score = 64 bits (153), Expect = 3e-008
Identities = 36/62 (58%), Positives = 42/62 (67%), Gaps = 3/62 (4%)
Frame = +1
Query: 322 PRKGGKLAFSLKQKSKLLAPPVKLGEEEDEEDVQNDQSFGSAKRPKL---DAPAKSTKLS 492
P GGKLAFSLKQKSK++ P VKLGE+ED+ DV N SAKR KL D+ S+K
Sbjct: 76 PPSGGKLAFSLKQKSKIVTPVVKLGEDEDDADVGNVSGDASAKRQKLSQSDSSELSSKQV 135
Query: 493 DV 498
DV
Sbjct: 136 DV 137
>gi|168480803|gb|ACA24495.1| gamma reponse I-like protein [Cucumis sativus]
Length = 446
Score = 62 bits (150), Expect = 6e-008
Identities = 38/72 (52%), Positives = 51/72 (70%), Gaps = 9/72 (12%)
Frame = +3
Query: 129 PPSIFVNDGSFMERFRQLQQE--KKDEAKDK---APESKPVKIIISGVSNPKPSSSSATK 293
PP++FVNDGSFMERF+QLQQ+ +KD+ KDK + E KP+K II+G S P +S K
Sbjct: 6 PPTLFVNDGSFMERFKQLQQKNGEKDKDKDKGATSEEPKPIK-IIAGTSIPHNTSG---K 61
Query: 294 TSIGFKTNDAQK 329
TS+ FK + +K
Sbjct: 62 TSMQFKGGEIRK 73
>gi|224055253|ref|XP_002298445.1| predicted protein [Populus trichocarpa]
Length = 450
Score = 57 bits (137), Expect = 2e-006
Identities = 36/62 (58%), Positives = 41/62 (66%), Gaps = 6/62 (9%)
Frame = +1
Query: 331 GGKLAFSLKQKSKLLAPPVKLG---EEEDEEDVQNDQSFGSAKRPK---LDAPAKSTKLS 492
GGKLAFSLKQKSKL+AP VKLG E+EDE D N SAKR K LD +S++
Sbjct: 79 GGKLAFSLKQKSKLMAPAVKLGEDEEDEDEVDAVNASGDVSAKRQKLGQLDTSEQSSRRL 138
Query: 493 DV 498
DV
Sbjct: 139 DV 140
>gi|224106045|ref|XP_002314024.1| predicted protein [Populus trichocarpa]
Length = 441
Score = 57 bits (137), Expect = 2e-006
Identities = 37/61 (60%), Positives = 40/61 (65%), Gaps = 6/61 (9%)
Frame = +1
Query: 334 GKLAFSLKQKSKLLAPPVKLG---EEEDEEDVQNDQSFGSAKRPK---LDAPAKSTKLSD 495
GKLAFSLKQKSKL+AP VKLG E+EDE D N SAKR K LDA +S K D
Sbjct: 80 GKLAFSLKQKSKLVAPAVKLGEDDEDEDEADAVNTSGGVSAKRQKLGQLDASEQSLKRLD 139
Query: 496 V 498
V
Sbjct: 140 V 140
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,680,125,884,373
Number of Sequences: 15229318
Number of Extensions: 5680125884373
Number of Successful Extensions: 1311504089
Number of sequences better than 0.0: 0
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