BLASTX 7.6.2
Query= UN52903 /QuerySize=733
(732 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G51540.1 | Symbols: | INVOLVED IN: biological... 160 9e-040
TAIR9_protein||AT3G27220.1 | Symbols: | kelch repeat-containing... 124 5e-029
>TAIR9_protein||AT1G51540.1 | Symbols: | INVOLVED IN: biological_process
unknown; LOCATED IN: Golgi apparatus; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043),
Kelch repeat type 1 (InterPro:IPR006652), Kelch repeat type 2
(InterPro:IPR011498), Kelch related (InterPro:IPR013089), Kelch-type
beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein
match is: kelch repeat-containing protein (TAIR:AT3G27220.1); Has 1571
Blast hits to 1365 proteins in 151 species: Archae - 11; Bacteria -
200; Metazoa - 1128; Fungi - 24; Plants - 53; Viruses - 41; Other
Eukaryotes - 114 (source: NCBI BLink). | chr1:19115702-19117381
FORWARD
Length = 416
Score = 160 bits (404), Expect = 9e-040
Identities = 70/76 (92%), Positives = 75/76 (98%)
Frame = +1
Query: 502 GGRFDMPKEMAHSHLGMVTDGRFIYIVTGQYGPQCRGPTAKTFVLDTDTNTWSDFIPLPV 681
GGRF+MPK+MAHSHLGMVTDGR+IYIVTGQ+GPQCRGPTAKTFVLDTDTNTW DF+PLPV
Sbjct: 137 GGRFNMPKDMAHSHLGMVTDGRYIYIVTGQFGPQCRGPTAKTFVLDTDTNTWKDFVPLPV 196
Query: 682 PRYAPATQLWRGRLHV 729
PRYAPATQLWRGRLHV
Sbjct: 197 PRYAPATQLWRGRLHV 212
Score = 128 bits (321), Expect = 4e-030
Identities = 58/75 (77%), Positives = 67/75 (89%)
Frame = +3
Query: 279 KKKDDNGRERKLSATFQDLPAPQLHWEKMSAAPVPRLDGAAIQIRNFLYVFAGYANINLV 458
KKK D+ +ERKLS TFQDLPAP+L WEKM+A+PVPRLDGAAIQIR+ LYVFAGY I+LV
Sbjct: 63 KKKKDSVKERKLSNTFQDLPAPELKWEKMAASPVPRLDGAAIQIRDLLYVFAGYGTIDLV 122
Query: 459 HSHVDVYNFVDNTWG 503
HSHVD+YNF DN+WG
Sbjct: 123 HSHVDIYNFTDNSWG 137
Score = 63 bits (152), Expect = 1e-010
Identities = 33/51 (64%), Positives = 41/51 (80%), Gaps = 3/51 (5%)
Frame = +1
Query: 85 KQSCGRLVFASFLALLAFGLIADFLWASSHRFSSSAM---LSLPSSVTTFV 228
KQ G++V S +ALLA GLIADFLWA+SHRFSS+A+ LSLPSS+TT +
Sbjct: 4 KQKYGKVVLVSCIALLATGLIADFLWATSHRFSSAAISAGLSLPSSLTTVI 54
>TAIR9_protein||AT3G27220.1 | Symbols: | kelch repeat-containing protein |
chr3:10051742-10053594 REVERSE
Length = 427
Score = 124 bits (311), Expect = 5e-029
Identities = 53/74 (71%), Positives = 65/74 (87%)
Frame = +1
Query: 508 RFDMPKEMAHSHLGMVTDGRFIYIVTGQYGPQCRGPTAKTFVLDTDTNTWSDFIPLPVPR 687
RF PKEMA+SHLG+VTDGR++Y+V+GQ GPQCRGPT+++FVLD+ T TW +F LP PR
Sbjct: 153 RFHTPKEMANSHLGIVTDGRYVYVVSGQLGPQCRGPTSRSFVLDSFTKTWLEFPSLPAPR 212
Query: 688 YAPATQLWRGRLHV 729
YAPATQ+WRGRLHV
Sbjct: 213 YAPATQIWRGRLHV 226
Score = 102 bits (253), Expect = 3e-022
Identities = 44/75 (58%), Positives = 56/75 (74%)
Frame = +3
Query: 276 KKKKDDNGRERKLSATFQDLPAPQLHWEKMSAAPVPRLDGAAIQIRNFLYVFAGYANINL 455
K+ D R LSA F D+PAP+L WE+M +APVPRLDG ++QI N LYVF+GY +++
Sbjct: 76 KQSNDTKDHVRFLSAIFADIPAPELKWEEMESAPVPRLDGYSVQINNLLYVFSGYGSLDY 135
Query: 456 VHSHVDVYNFVDNTW 500
VHSHVDV+NF DN W
Sbjct: 136 VHSHVDVFNFTDNKW 150
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,922,890,196
Number of Sequences: 33410
Number of Extensions: 24922890196
Number of Successful Extensions: 798293427
Number of sequences better than 0.0: 0
|