BLASTX 7.6.2
Query= UN52984 /QuerySize=793
(792 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|15223258|ref|NP_174543.1| putative F-box protein [Arabidopsis... 184 2e-044
gi|297851796|ref|XP_002893779.1| hypothetical protein ARALYDRAFT... 164 1e-038
gi|297851916|ref|XP_002893839.1| predicted protein [Arabidopsis ... 154 2e-035
gi|297846240|ref|XP_002891001.1| predicted protein [Arabidopsis ... 142 8e-032
gi|297796163|ref|XP_002865966.1| hypothetical protein ARALYDRAFT... 135 8e-030
gi|297851488|ref|XP_002893625.1| hypothetical protein ARALYDRAFT... 126 5e-027
gi|297846032|ref|XP_002890897.1| hypothetical protein ARALYDRAFT... 111 1e-022
gi|15221502|ref|NP_174365.1| F-box domain-containing protein [Ar... 109 6e-022
gi|4926821|gb|AAD32931.1|AC004135_6 T17H7.6 [Arabidopsis thaliana] 109 6e-022
gi|297812411|ref|XP_002874089.1| hypothetical protein ARALYDRAFT... 90 4e-016
gi|297812415|ref|XP_002874091.1| predicted protein [Arabidopsis ... 77 3e-012
gi|297819588|ref|XP_002877677.1| hypothetical protein ARALYDRAFT... 72 1e-010
gi|15238958|ref|NP_199058.1| putative F-box protein [Arabidopsis... 67 3e-009
gi|4926818|gb|AAD32928.1|AC004135_3 T17H7.3 [Arabidopsis thaliana] 66 5e-009
gi|15241447|ref|NP_199235.1| F-box protein [Arabidopsis thaliana] 64 2e-008
gi|297851526|ref|XP_002893644.1| hypothetical protein ARALYDRAFT... 64 2e-008
gi|297841781|ref|XP_002888772.1| hypothetical protein ARALYDRAFT... 62 7e-008
gi|15220125|ref|NP_175148.1| F-box protein [Arabidopsis thaliana] 61 1e-007
gi|22329872|ref|NP_174364.2| F-box domain-containing protein [Ar... 61 2e-007
>gi|15223258|ref|NP_174543.1| putative F-box protein [Arabidopsis thaliana]
Length = 446
Score = 184 bits (465), Expect = 2e-044
Identities = 110/214 (51%), Positives = 138/214 (64%), Gaps = 22/214 (10%)
Frame = +3
Query: 177 MKRK-RDEEERLCSIG---DRIPIDLKKATV------TRLPGRKLLESKEDTRLPSK--L 320
MKRK D+E+R CS D IP+DLK ATV + KL E +++ PSK L
Sbjct: 1 MKRKDDDQEDRSCSSASKLDPIPLDLKMATVPTKSHMKKSHQNKLEEDEKEDTNPSKLEL 60
Query: 321 DSLHYDLKMAVMSRVPAKSLMKVRCVSKMWCSFIRSQELVDSIFAVSSTQARFIVSFSNN 500
DSL DLKMA+++R+PAKSLMK+RCVSKMW S IRS+ +DS +A+SS Q+RFIV SN
Sbjct: 61 DSLPLDLKMAILTRIPAKSLMKLRCVSKMWSSIIRSRGFIDSYYAISSKQSRFIVGLSNA 120
Query: 501 AFGKPEEKLTFVFSY-------PEGSSLVPRFEMALPVGLRASQGYCASLHGFLSFYIDH 659
AF +PE++LTF+FS+ SSLVP FEMA+P L AS HG L+
Sbjct: 121 AFNEPEKQLTFLFSFSHEDGEKSSSSSLVPNFEMAVPCSLAGLSHSLASFHGILAV---E 177
Query: 660 GLMVCNPSTEQVFNLPKTTQFVGYDPIGGQHKAL 761
G ++CNP+TEQ LP T FVGYDPI Q+KAL
Sbjct: 178 GKVMCNPNTEQFTTLPVGTIFVGYDPIDDQYKAL 211
>gi|297851796|ref|XP_002893779.1| hypothetical protein ARALYDRAFT_890952
[Arabidopsis lyrata subsp. lyrata]
Length = 404
Score = 164 bits (415), Expect = 1e-038
Identities = 95/172 (55%), Positives = 115/172 (66%), Gaps = 12/172 (6%)
Frame = +3
Query: 285 ESKEDTRLPSK---LDSLHYDLKMAVMSRVPAKSLMKVRCVSKMWCSFIRSQELVDSIFA 455
++++DT PSK LDSL DLKMA+++R+ AKSL RCVSKMW S IRS+ +DS F+
Sbjct: 4 KNEKDTTNPSKLDLLDSLPLDLKMAILTRLSAKSLKNFRCVSKMWSSIIRSRGFIDSFFS 63
Query: 456 VSSTQARFIVSFSNNAFGKPEEKLT--FVFSYPEG------SSLVPRFEMALP-VGLRAS 608
+S+ Q+RFIVS N FG+PEEKL F FS+ EG SSLVP FEMALP V
Sbjct: 64 MSAKQSRFIVSLCNIVFGEPEEKLILFFSFSHDEGDESSSSSSLVPNFEMALPAVSFSFY 123
Query: 609 QGYCASLHGFLSFYIDHGLMVCNPSTEQVFNLPKTTQFVGYDPIGGQHKALS 764
G CASLHG L+ + LM+CNPSTEQV L FVGYDPI Q+K LS
Sbjct: 124 SGSCASLHGILTVETEGQLMMCNPSTEQVVKLTSDCIFVGYDPIDDQYKVLS 175
>gi|297851916|ref|XP_002893839.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 342
Score = 154 bits (388), Expect = 2e-035
Identities = 79/145 (54%), Positives = 104/145 (71%), Gaps = 5/145 (3%)
Frame = +3
Query: 345 MAVMSRVPAKSLMKVRCVSKMWCSFIRSQELVDSIFAVSSTQARFIVSFSNNAFGKPEEK 524
M +++R+PAKSLMK+R VSK+W S IRS+ ++S +++SS Q+RFIV+ SN+ FGKP EK
Sbjct: 1 MVILARLPAKSLMKLRRVSKIWSSIIRSRGFINSFYSISSKQSRFIVALSNSVFGKPAEK 60
Query: 525 LT--FVFSYPEG---SSLVPRFEMALPVGLRASQGYCASLHGFLSFYIDHGLMVCNPSTE 689
LT F+FS+ +G SSL+P FEMA+P + Y AS HG L+ DH ++CNPSTE
Sbjct: 61 LTFFFLFSHDDGDDSSSLLPNFEMAIPNCSFSGFSYLASFHGILAVRADHKWLMCNPSTE 120
Query: 690 QVFNLPKTTQFVGYDPIGGQHKALS 764
Q LP TT FVGYDPI Q+K LS
Sbjct: 121 QFVKLPATTAFVGYDPIDDQYKVLS 145
>gi|297846240|ref|XP_002891001.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 166
Score = 142 bits (356), Expect = 8e-032
Identities = 77/134 (57%), Positives = 93/134 (69%), Gaps = 11/134 (8%)
Frame = +3
Query: 222 DRIPIDLKKATV------TRLPGRKLLESKEDTRLPSKLDSLHYDLKMAVMSRVPAKSLM 383
D IP+DLK TV + KL E + DT PSKLDSL DLKMA+++R+PAKSLM
Sbjct: 19 DPIPLDLKMTTVPSKSHMKKSHQNKLEEDENDTTNPSKLDSLPLDLKMAILTRMPAKSLM 78
Query: 384 KVRCVSKMWCSFIRSQELVDSIFAVSSTQARFIVSFSNNAFGKPEEKLTFVFSY-----P 548
K+RCVSKMW S IRS+ +DS +A SS Q+RFIV FSN FG PEE+LTF FS+
Sbjct: 79 KLRCVSKMWSSIIRSRGFIDSYYATSSRQSRFIVGFSNGVFGTPEERLTFFFSFSHDEGQ 138
Query: 549 EGSSLVPRFEMALP 590
E SSL+P FEMA+P
Sbjct: 139 ESSSLLPTFEMAVP 152
>gi|297796163|ref|XP_002865966.1| hypothetical protein ARALYDRAFT_357572
[Arabidopsis lyrata subsp. lyrata]
Length = 455
Score = 135 bits (339), Expect = 8e-030
Identities = 73/165 (44%), Positives = 104/165 (63%), Gaps = 6/165 (3%)
Frame = +3
Query: 291 KEDTRLPSKLDSLHYDLKMAVMSRVPAKSLMKVRCVSKMWCSFIRSQELVDSIFAVSSTQ 470
K + KLD + +DL++ +++R+PAKSLMK +CVSKMW IRSQ VDS +A+SST+
Sbjct: 56 KREDDQKDKLDPIPFDLEVEILTRLPAKSLMKFQCVSKMWSFIIRSQRFVDSYYALSSTR 115
Query: 471 ARFIVSFSNNAFGKPEEKLTFVF--SYPE--GSSLVPRFEMALPVGLRASQGYCASLHGF 638
+RF V+FSN F + + + F+F SY E SSLV + ++ +PV + C S+HGF
Sbjct: 116 SRFTVTFSNGLFAEDDARRLFIFSSSYEEEKSSSLVAKLDITIPVVTMDYRSKCPSIHGF 175
Query: 639 LSFYIDHGLMVCNPSTEQVFNLP--KTTQFVGYDPIGGQHKALSV 767
+S +VCNPST QV LP +GYDP+G Q K L++
Sbjct: 176 VSCCNGPQFIVCNPSTRQVITLPIKGPRASLGYDPVGEQFKVLNL 220
>gi|297851488|ref|XP_002893625.1| hypothetical protein ARALYDRAFT_336147
[Arabidopsis lyrata subsp. lyrata]
Length = 538
Score = 126 bits (315), Expect = 5e-027
Identities = 74/174 (42%), Positives = 103/174 (59%), Gaps = 11/174 (6%)
Frame = +3
Query: 273 RKLLESKEDTRLPSKLDSLHYDLKMAVMSRVPAKSLMKVRCVSKMWCSFIRSQELVDSIF 452
R + + E PSK+DS+ DL++ +++R+PAKSL+K +CVSK W S IRSQ +DS +
Sbjct: 51 RDINKYDEKDTSPSKVDSIPLDLEVEILTRLPAKSLIKFQCVSKTWSSIIRSQRFIDSYY 110
Query: 453 AVSSTQA--RFIVSFSNNAFGKPEEKLTFVFS-----YPEGSSLVPRFEMALPVGLRASQ 611
A+SST RFI++FSN K E+K F+FS + SSLV +M +P
Sbjct: 111 ALSSTMRSDRFIIAFSNGESAKREDKRLFIFSSSYEGHESSSSLVTNLDMTIPSVTVICF 170
Query: 612 GYCASLHGFLSFYIDHGLMVCNPSTEQVFNLPKT---TQFVGYDPIGGQHKALS 764
CAS+HG + +VCNP T +V LP + T F GYDP+ GQ KAL+
Sbjct: 171 STCASVHGLIGSTRSGPFLVCNPCTGKVTMLPCSGAHTSF-GYDPVDGQFKALT 223
>gi|297846032|ref|XP_002890897.1| hypothetical protein ARALYDRAFT_473309
[Arabidopsis lyrata subsp. lyrata]
Length = 473
Score = 111 bits (277), Expect = 1e-022
Identities = 54/138 (39%), Positives = 89/138 (64%), Gaps = 7/138 (5%)
Frame = +3
Query: 315 KLDSLHYDLKMAVMSRVPAKSLMKVRCVSKMWCSFIRSQELVDSIFAVSSTQARFIVSFS 494
++D + DL + +++R+PAKSL++ +CVSK+W S I+SQ +DS +++SST+ R IV+F+
Sbjct: 5 EIDHIPLDLTVEILTRLPAKSLLRFKCVSKLWSSIIQSQGFIDSFYSISSTRPRSIVAFT 64
Query: 495 NNAFGKPEEKLTFVFS-----YPEGSSLVPRFEMALP--VGLRASQGYCASLHGFLSFYI 653
N F K E+K F+FS + SS++ ++ +P C S++GF++ +
Sbjct: 65 NGLFAKDEDKRFFIFSSSQEGHESSSSVINNLDITIPSLTVCNNPASRCVSVNGFVACSL 124
Query: 654 DHGLMVCNPSTEQVFNLP 707
+ GLM+CNPST QV LP
Sbjct: 125 NTGLMICNPSTRQVIVLP 142
>gi|15221502|ref|NP_174365.1| F-box domain-containing protein [Arabidopsis
thaliana]
Length = 399
Score = 109 bits (271), Expect = 6e-022
Identities = 55/139 (39%), Positives = 87/139 (62%), Gaps = 9/139 (6%)
Frame = +3
Query: 315 KLDSLHYDLKMAVMSRVPAKSLMKVRCVSKMWCSFIRSQELVDSIFAVSSTQARFIVSFS 494
++D + +DL + +++R+PAKSLMK +CVSK+W S I +Q +DS +++SST+ RFIV+FS
Sbjct: 5 EIDHIPFDLTVEILTRLPAKSLMKFKCVSKLWSSIIHNQSFIDSFYSISSTRPRFIVAFS 64
Query: 495 NNAFGKPEEKLTFVFS-----YPEGSSLVPRFEMALPVGLRASQGY---CASLHGFLSFY 650
N +F +EK F+FS + SS++ + +P L S C S++GF++
Sbjct: 65 NGSFPSDKEKRLFIFSSSHEGHESSSSVITNLDTTIP-SLTVSNNLASRCISVNGFIACS 123
Query: 651 IDHGLMVCNPSTEQVFNLP 707
+ +CNPST QV LP
Sbjct: 124 LYTRFTICNPSTRQVIVLP 142
>gi|4926821|gb|AAD32931.1|AC004135_6 T17H7.6 [Arabidopsis thaliana]
Length = 502
Score = 109 bits (271), Expect = 6e-022
Identities = 55/139 (39%), Positives = 87/139 (62%), Gaps = 9/139 (6%)
Frame = +3
Query: 315 KLDSLHYDLKMAVMSRVPAKSLMKVRCVSKMWCSFIRSQELVDSIFAVSSTQARFIVSFS 494
++D + +DL + +++R+PAKSLMK +CVSK+W S I +Q +DS +++SST+ RFIV+FS
Sbjct: 5 EIDHIPFDLTVEILTRLPAKSLMKFKCVSKLWSSIIHNQSFIDSFYSISSTRPRFIVAFS 64
Query: 495 NNAFGKPEEKLTFVFS-----YPEGSSLVPRFEMALPVGLRASQGY---CASLHGFLSFY 650
N +F +EK F+FS + SS++ + +P L S C S++GF++
Sbjct: 65 NGSFPSDKEKRLFIFSSSHEGHESSSSVITNLDTTIP-SLTVSNNLASRCISVNGFIACS 123
Query: 651 IDHGLMVCNPSTEQVFNLP 707
+ +CNPST QV LP
Sbjct: 124 LYTRFTICNPSTRQVIVLP 142
>gi|297812411|ref|XP_002874089.1| hypothetical protein ARALYDRAFT_910273
[Arabidopsis lyrata subsp. lyrata]
Length = 393
Score = 90 bits (221), Expect = 4e-016
Identities = 54/157 (34%), Positives = 83/157 (52%), Gaps = 19/157 (12%)
Frame = +3
Query: 336 DLKMAVMSRVPAKSLMKVRCVSKMWCSFIRSQELVDSIFAVSSTQARFIVSFSNNAFGKP 515
DL + ++SR+PAKSL++ + VSK W S IRS++ VDS S T+ RF+++F N
Sbjct: 25 DLTLEILSRLPAKSLIRFQAVSKFWFSIIRSKDFVDSFLTRSKTRPRFLLTFKNF----- 79
Query: 516 EEKLTFVFSYPE------GSSLVPRFEMALPVGLRASQGYCASLHGFLSFYIDHGLMVCN 677
+ + F+FS PE S++ R +M + R C ++GF+ + VCN
Sbjct: 80 DSRKRFIFSAPEHQKNDKSSTVFARHDMTISAD-RVYHIRCRPVNGFVCCTRGDSIAVCN 138
Query: 678 PSTEQVFNLPKTTQ-------FVGYDPIGGQHKALSV 767
P+T Q+ LP +GYDP+ Q+K L V
Sbjct: 139 PTTRQIVKLPDVESNGRHVYARLGYDPVEDQYKVLCV 175
>gi|297812415|ref|XP_002874091.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 267
Score = 77 bits (188), Expect = 3e-012
Identities = 47/159 (29%), Positives = 83/159 (52%), Gaps = 20/159 (12%)
Frame = +3
Query: 324 SLHYDLKMAVMSRVPAKSLMKVRCVSKMWCSFIRSQELVDSIFAVSSTQARFIVSFSNNA 503
++ +DL + ++S++PAKSL++ + VSK+W S IRS++ DS S T+ R + +F +
Sbjct: 115 NIPFDLTLEILSKLPAKSLIRFQAVSKLWFSIIRSKDFTDSFLTRSKTRPRLLFTFKHF- 173
Query: 504 FGKPEEKLTFVFSYPE------GSSLVPRFEMALPVGLRASQGYCASLHGFLSFYIDHGL 665
+ + F+FS PE S++V R +M + + + ++GF+ +
Sbjct: 174 ----DSRKRFIFSAPEHDNNDKSSTVVARHDMTISDLVYYIRS--RPVNGFVCCTRGDSI 227
Query: 666 MVCNPSTEQVFNLPKTTQ-------FVGYDPIGGQHKAL 761
VCNP+T Q+ P +GYDP+ Q+K L
Sbjct: 228 AVCNPTTRQIVKFPDVKSNGRDVYARLGYDPVQDQYKVL 266
>gi|297819588|ref|XP_002877677.1| hypothetical protein ARALYDRAFT_906230
[Arabidopsis lyrata subsp. lyrata]
Length = 396
Score = 72 bits (174), Expect = 1e-010
Identities = 60/189 (31%), Positives = 82/189 (43%), Gaps = 34/189 (17%)
Frame = +3
Query: 258 TRLPGRKLLESKEDTRLP---------SKLDSLHYDLKMAVMSRVPAKSLMKVRCVSKMW 410
T + RK SKED L +L DL + ++SRVPAKS K CVSK W
Sbjct: 3 TMMKKRKRHVSKEDVALTISSSLGEYGENSGTLPMDLMVEILSRVPAKSAAKFHCVSKNW 62
Query: 411 CSFIRSQELVDSIFAVSSTQARFIVSFSNNA----FGKPEEKLTFVFSYPEGSSLVPRFE 578
S +RS + S T+ R +++F F PE ++ S + +V
Sbjct: 63 NSLLRSSYFTNLYLTRSPTRPRLLITFQAEGKWSFFSSPE----YLISDQNSNLVVVDNH 118
Query: 579 MALPVGLRASQGYCASLHGF--------LSFYIDHGLMVCNPSTEQVFNLPKTTQ----- 719
M +P S G C + G LS D +M+CNPST Q +LPK
Sbjct: 119 MDVPKDY--SFGVCEPVCGLLCTRDEWVLSRKKDARMMICNPSTRQFQSLPKVRSRRNKV 176
Query: 720 --FVGYDPI 740
++GYDPI
Sbjct: 177 ITYIGYDPI 185
>gi|15238958|ref|NP_199058.1| putative F-box protein [Arabidopsis thaliana]
Length = 395
Score = 67 bits (162), Expect = 3e-009
Identities = 46/159 (28%), Positives = 75/159 (47%), Gaps = 17/159 (10%)
Frame = +3
Query: 321 DSLHYDLKMAVMSRVPAKSLMKVRCVSKMWCSFIRSQELVDSIFAVSSTQARFIVSFSNN 500
DS+ DL + ++SR+PAKS+ + CVSK+W S + + +SS + R + +FS +
Sbjct: 8 DSIPIDLILEILSRLPAKSITRFHCVSKLWGSMLCRPYFNELFLTISSARPRLLFAFSKH 67
Query: 501 A----FGKPEEKLTF-VFSYPEGSSLVPRFEMALPVGLRASQGYCASLHGFLSFYIDHGL 665
F P+ + + S+ + +F L + Y + L F + +I
Sbjct: 68 GEWRFFSSPQPQNPYGKSSFVATADFHTKFSQNLNI-----CNYTSGLVYFSAMWITKAD 122
Query: 666 MVCNPSTEQVFNLPK-------TTQFVGYDPIGGQHKAL 761
++CNPST LPK T F +DP+G Q K L
Sbjct: 123 VICNPSTGHYAMLPKLLLTYGETRSFFLFDPVGKQFKVL 161
>gi|4926818|gb|AAD32928.1|AC004135_3 T17H7.3 [Arabidopsis thaliana]
Length = 481
Score = 66 bits (160), Expect = 5e-009
Identities = 35/69 (50%), Positives = 50/69 (72%), Gaps = 3/69 (4%)
Frame = +3
Query: 288 SKEDTRLPSK--LDSLHYDLKMAVMSRVPAKSLMKVRCVSKMWCSFIRSQELVDSIFAVS 461
+++DT PS+ LDSL +DLKM +++R+ AKSL + VSKMW S I SQ +DS F +S
Sbjct: 277 NEKDTN-PSEIDLDSLPFDLKMVILTRLSAKSLTNFKRVSKMWSSIIGSQRFIDSFFTMS 335
Query: 462 STQARFIVS 488
S Q+RF+V+
Sbjct: 336 SKQSRFVVA 344
>gi|15241447|ref|NP_199235.1| F-box protein [Arabidopsis thaliana]
Length = 295
Score = 64 bits (154), Expect = 2e-008
Identities = 54/178 (30%), Positives = 82/178 (46%), Gaps = 30/178 (16%)
Frame = +3
Query: 273 RKLLESKEDTRLPSKLDSLHYDLKMAVMSRVPAKSLMKVRCVSKMWCSFIRSQELVDSIF 452
R+ + D R + D L DL ++ R+PAK+L + CVSK+W S IRS++L+
Sbjct: 44 RRWRKKVSDDRRSTNSDLLPMDLIKEILKRLPAKTLARFLCVSKLWSSIIRSRDLMKLFL 103
Query: 453 AVSSTQ-ARFIVSFSNNAFGKPEEKLTFVFSYPEGSSLVPRFEMALPVGLRASQGY---C 620
SS + R +F + F+FS E S V + +P + GY C
Sbjct: 104 TESSARPGRLFFTFR-------RKDDCFLFSSEESS--VATYLFTIP-----ASGYTNNC 149
Query: 621 ASLHGFLSF----YIDHGLMVCNPSTEQVFNLPK-------TTQFVGYDPIGGQHKAL 761
+ +HG + + Y L+V N ST + LP+ +GYDPI G +K L
Sbjct: 150 SFVHGLICYGTTAYASQ-LVVYNSSTRRSITLPEIEARSFVLKHLLGYDPIDGVYKVL 206
>gi|297851526|ref|XP_002893644.1| hypothetical protein ARALYDRAFT_473308
[Arabidopsis lyrata subsp. lyrata]
Length = 459
Score = 64 bits (154), Expect = 2e-008
Identities = 31/61 (50%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Frame = +3
Query: 288 SKEDTRLPSKLDSLHYDLKMAVMSRVPAKSLMKVRCVSKMWCSFIRSQELVDSIFAVSST 467
+++DT PS++DSL DLKMA+++R+PAKSL ++ VSKMW S IRS+ +D F+VS+
Sbjct: 196 NEKDTN-PSEIDSLPLDLKMAILTRLPAKSLTNLKHVSKMWSSIIRSRGFIDYFFSVSTE 254
Query: 468 Q 470
+
Sbjct: 255 E 255
>gi|297841781|ref|XP_002888772.1| hypothetical protein ARALYDRAFT_894842
[Arabidopsis lyrata subsp. lyrata]
Length = 344
Score = 62 bits (150), Expect = 7e-008
Identities = 48/173 (27%), Positives = 75/173 (43%), Gaps = 34/173 (19%)
Frame = +3
Query: 312 SKLDSLHYDLKMAVMSRVPAKSLMKVRCVSKMWCSFIRSQELVDSIFAVSSTQARFIVSF 491
+ ++L D++M ++SR+P KSLM CVSK W S IRS+ D + S T+ R +
Sbjct: 4 TSFETLPLDMQMEILSRLPLKSLMGCMCVSKKWASIIRSKAFRDHYLSRSMTRPRVLFVA 63
Query: 492 SNNAFGKPEEKLTFVFSYPEGSSL------------VPRFEMALPV-GLRASQGYCASLH 632
++ F K + F Y E L VP +++ P+ GL QG
Sbjct: 64 NHREFHKFTSEAFFYSVYQEEEPLWLSGKQQMRSEEVPLLKVSQPILGLICQQG------ 117
Query: 633 GFLSFYIDHGLMVCNPSTEQVFNLPK--------TTQFVGYDPIGGQHKALSV 767
+ +++CNP ++ LP+ T F GYD K L +
Sbjct: 118 -------NTKIVICNPGSKNCRTLPQIKVPKGASMTSFFGYDKDKDVFKVLCI 163
>gi|15220125|ref|NP_175148.1| F-box protein [Arabidopsis thaliana]
Length = 475
Score = 61 bits (147), Expect = 1e-007
Identities = 52/164 (31%), Positives = 75/164 (45%), Gaps = 25/164 (15%)
Frame = +3
Query: 318 LDSLHYDLKMAVMSRVPAKSLMKVRCVSKMWCSFIRSQELVDSIFAVSSTQARFIVSFSN 497
L+ LH DL + ++SR+ AKS+ RCVSK W S + SQ+ V+S S ++ R +F
Sbjct: 28 LEKLHIDLVIEILSRLSAKSIAICRCVSKQWNSLLVSQDFVESFLRSSLSRPRIWFTF-- 85
Query: 498 NAFGKPEEKLTFVFSYPE----GSSL-VPRFEMALPVGLRASQGYCASLHGFLSF----- 647
+ + K F FS P+ G++L V E + C S+HGF+
Sbjct: 86 ----RFDGKWNF-FSSPQPQKFGNNLSVEATEHHMGSYENWYMKSCQSVHGFIFMSYNSK 140
Query: 648 -YIDHGLMVCNPSTEQVFNLPKT-------TQFVGYDPIGGQHK 755
D ++ NP T Q+ LPK F YDP Q K
Sbjct: 141 GMTDRTQVIWNPCTRQLITLPKLEPENLDFNSFFAYDPTEKQFK 184
>gi|22329872|ref|NP_174364.2| F-box domain-containing protein [Arabidopsis
thaliana]
Length = 482
Score = 61 bits (146), Expect = 2e-007
Identities = 33/65 (50%), Positives = 46/65 (70%), Gaps = 3/65 (4%)
Frame = +3
Query: 288 SKEDTRLPSK--LDSLHYDLKMAVMSRVPAKSLMKVRCVSKMWCSFIRSQELVDSIFAVS 461
+++DT PS+ LDSL +DLKM +++R+ AKSL + VSKMW S I SQ +DS F +S
Sbjct: 222 NEKDTN-PSEIDLDSLPFDLKMVILTRLSAKSLTNFKRVSKMWSSIIGSQRFIDSFFTMS 280
Query: 462 STQAR 476
S Q+R
Sbjct: 281 SKQSR 285
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,680,125,884,373
Number of Sequences: 15229318
Number of Extensions: 5680125884373
Number of Successful Extensions: 1311504089
Number of sequences better than 0.0: 0
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