BLASTX 7.6.2
Query= UN53241 /QuerySize=612
(611 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G02990.1 | Symbols: | mitochondrial transcrip... 248 3e-066
TAIR9_protein||AT2G44020.1 | Symbols: | mitochondrial transcrip... 107 9e-024
TAIR9_protein||AT2G21710.1 | Symbols: EMB2219 | EMB2219 (embryo ... 81 4e-016
TAIR9_protein||AT2G34620.1 | Symbols: | mitochondrial transcrip... 62 3e-010
TAIR9_protein||AT2G03050.1 | Symbols: | mitochondrial transcrip... 54 9e-008
TAIR9_protein||AT2G36000.1 | Symbols: | mitochondrial transcrip... 49 3e-006
TAIR9_protein||AT2G36000.2 | Symbols: | mitochondrial transcrip... 49 3e-006
TAIR9_protein||AT5G54180.1 | Symbols: PTAC15 | PTAC15 (PLASTID T... 48 5e-006
>TAIR9_protein||AT4G02990.1 | Symbols: | mitochondrial transcription
termination factor family protein / mTERF family protein |
chr4:1322158-1323783 FORWARD
Length = 542
Score = 248 bits (631), Expect = 3e-066
Identities = 119/135 (88%), Positives = 129/135 (95%), Gaps = 2/135 (1%)
Frame = -3
Query: 609 DQTREMVIGCPQVLALNIGIMKLSFEFFLKEMRRPLQDLVDFPAFFTYGLESTVKPRHKR 430
DQTREMVIGCPQVLALN+GIMKLSFE+F KEM+RPLQDLVDFPAFFTYGLESTVKPRHK+
Sbjct: 410 DQTREMVIGCPQVLALNLGIMKLSFEYFQKEMKRPLQDLVDFPAFFTYGLESTVKPRHKK 469
Query: 429 VFKKGIKCSLAWMLNCSEEKFEQRMSYDTIDIEEVESGPASFDMSTLMQPEREEEEESDS 250
+ KKGIKCSLAWMLNCS+EKFEQRMSYDTIDIEEVE+ P+SFDM+TLMQPER EEESDS
Sbjct: 470 IIKKGIKCSLAWMLNCSDEKFEQRMSYDTIDIEEVETDPSSFDMNTLMQPER--EEESDS 527
Query: 249 EYEEEEDDEDEEFA* 205
EYEEEEDD+DEEFA*
Sbjct: 528 EYEEEEDDDDEEFA* 542
>TAIR9_protein||AT2G44020.1 | Symbols: | mitochondrial transcription
termination factor-related / mTERF-related | chr2:18217737-18219260
REVERSE
Length = 508
Score = 107 bits (265), Expect = 9e-024
Identities = 53/123 (43%), Positives = 83/123 (67%), Gaps = 9/123 (7%)
Frame = -3
Query: 597 EMVIGCPQVLALNIGIMKLSFEFFLKEMRRPLQDLVDFPAFFTYGLESTVKPRHKRVFKK 418
+MV+ CPQ+L + +MK S+ F+ EM RP+++LV++P +FTY LES +KPR++++ K
Sbjct: 379 KMVVRCPQILCSRVELMKNSYYFYKTEMGRPMKELVEYPEYFTYSLESRIKPRYQKLQSK 438
Query: 417 GIKCSLAWMLNCSEEKFEQRMSYDTIDIEEVESGPASFDMSTLMQ------PEREEEEES 256
GI+ SL W LNCS+++FE+R+ + ID + GP +FDM ++ EEE+ES
Sbjct: 439 GIRSSLNWFLNCSDQRFEERLQGNFIDPD--TEGP-TFDMGGKLEMPGGEIVTDEEEDES 495
Query: 255 DSE 247
D E
Sbjct: 496 DDE 498
>TAIR9_protein||AT2G21710.1 | Symbols: EMB2219 | EMB2219 (embryo defective 2219)
| chr2:9270886-9273307 FORWARD
Length = 642
Score = 81 bits (199), Expect = 4e-016
Identities = 43/126 (34%), Positives = 68/126 (53%)
Frame = -3
Query: 606 QTREMVIGCPQVLALNIGIMKLSFEFFLKEMRRPLQDLVDFPAFFTYGLESTVKPRHKRV 427
Q EM+ P +L N+ ++ + + + M RPLQDL++FP FF+Y LE + PRH +
Sbjct: 513 QLGEMIADFPMLLRYNVDNLRPKYRYLRRTMIRPLQDLIEFPRFFSYSLERRIIPRHTIM 572
Query: 426 FKKGIKCSLAWMLNCSEEKFEQRMSYDTIDIEEVESGPASFDMSTLMQPEREEEEESDSE 247
+ + L +ML C++E+FE+R+ E E+G S D + ++E E
Sbjct: 573 VENRVNFKLRYMLACTDEEFERRVRDKVERRERFEAGLDSEDSQPSDENISDQEIAFSDE 632
Query: 246 YEEEED 229
EEEED
Sbjct: 633 AEEEED 638
>TAIR9_protein||AT2G34620.1 | Symbols: | mitochondrial transcription
termination factor-related / mTERF-related | chr2:14577196-14578203
FORWARD
Length = 304
Score = 62 bits (148), Expect = 3e-010
Identities = 26/82 (31%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Frame = -3
Query: 594 MVIGCPQVLALNI-GIMKLSFEFFLKEMRRPLQDLVDFPAFFTYGLESTVKPRHKRVFKK 418
M++ CP + +I K ++F+ E++ L++L +FP +F + LE +KPRH ++
Sbjct: 214 MILRCPALFTFSIENNFKPKLDYFMSEIKGKLENLKEFPQYFAFSLEKRIKPRHLESMER 273
Query: 417 GIKCSLAWMLNCSEEKFEQRMS 352
G++ L+ ML ++E+FEQ ++
Sbjct: 274 GLELPLSLMLKSTDEEFEQLLT 295
>TAIR9_protein||AT2G03050.1 | Symbols: | mitochondrial transcription
termination factor-related / mTERF-related | chr2:900094-900945
REVERSE
Length = 284
Score = 54 bits (127), Expect = 9e-008
Identities = 27/81 (33%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Frame = -3
Query: 606 QTREMVIGCPQVLALNI-GIMKLSFEFFLKEMRRPLQDLVDFPAFFTYGLESTVKPRHKR 430
+ +MV+ P +L ++ + EFF++EMR +++L FP +F++ LE +KPRH+
Sbjct: 188 EVAKMVVRSPALLTYSVDNNLVPKVEFFIEEMRGDVKELKRFPQYFSFSLERKIKPRHRL 247
Query: 429 VFKKGIKCSLAWMLNCSEEKF 367
+ + GI L+ ML S+ +F
Sbjct: 248 LKEHGILMPLSEMLKVSDGQF 268
>TAIR9_protein||AT2G36000.1 | Symbols: | mitochondrial transcription
termination factor-related / mTERF-related | chr2:15117181-15118182
FORWARD
Length = 334
Score = 49 bits (114), Expect = 3e-006
Identities = 21/67 (31%), Positives = 42/67 (62%), Gaps = 5/67 (7%)
Frame = -3
Query: 534 EFFLKEMRRPLQDLVDFPAFFTYGLESTVKPRHKRVFKKGIKCSLAWMLNCSEEKFEQRM 355
++ + EM R ++++++FP +F++ LE+ +KPRH+ KG++ L ML +E F
Sbjct: 252 KYLMVEMGRDVREVLEFPQYFSFSLENRIKPRHEACAAKGVRFPLPVMLKTNEAGFR--- 308
Query: 354 SYDTIDI 334
DT+++
Sbjct: 309 --DTLEV 313
>TAIR9_protein||AT2G36000.2 | Symbols: | mitochondrial transcription
termination factor-related / mTERF-related | chr2:15117181-15118333
FORWARD
Length = 319
Score = 49 bits (114), Expect = 3e-006
Identities = 21/67 (31%), Positives = 42/67 (62%), Gaps = 5/67 (7%)
Frame = -3
Query: 534 EFFLKEMRRPLQDLVDFPAFFTYGLESTVKPRHKRVFKKGIKCSLAWMLNCSEEKFEQRM 355
++ + EM R ++++++FP +F++ LE+ +KPRH+ KG++ L ML +E F
Sbjct: 252 KYLMVEMGRDVREVLEFPQYFSFSLENRIKPRHEACAAKGVRFPLPVMLKTNEAGFR--- 308
Query: 354 SYDTIDI 334
DT+++
Sbjct: 309 --DTLEV 313
>TAIR9_protein||AT5G54180.1 | Symbols: PTAC15 | PTAC15 (PLASTID
TRANSCRIPTIONALLY ACTIVE15) | chr5:21988544-21990183 FORWARD
Length = 501
Score = 48 bits (112), Expect = 5e-006
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Frame = -3
Query: 579 PQVLALNIGIMKLSFEFFLKEMRRPLQDLVDFPAFFTYGLESTVKPRHKRVFK-KGIKCS 403
PQVL N ++ E+ ++ M R +++L+ FPAF Y L+S +K R++ K +G S
Sbjct: 417 PQVLQYNYTSLEEKLEYLIEYMGREVEELLAFPAFLGYKLDSRIKHRYEEKLKSRGENMS 476
Query: 402 LAWMLNCSEEKFEQ 361
L +L S E+F +
Sbjct: 477 LNKLLTVSAERFSK 490
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,099,249,772
Number of Sequences: 33410
Number of Extensions: 25099249772
Number of Successful Extensions: 809041927
Number of sequences better than 0.0: 0
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