BLASTX 7.6.2
Query= UN53480 /QuerySize=587
(586 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G30620.1 | Symbols: | histone H1.2 | chr2:130... 101 4e-022
TAIR9_protein||AT1G06760.1 | Symbols: | histone H1, putative | ... 72 2e-013
>TAIR9_protein||AT2G30620.1 | Symbols: | histone H1.2 | chr2:13045360-13046267
FORWARD
Length = 274
Score = 101 bits (250), Expect = 4e-022
Identities = 72/119 (60%), Positives = 75/119 (63%), Gaps = 21/119 (17%)
Frame = -1
Query: 586 KPAGKGSKK------TKAAVAVKPKAAKVVAVKPKPKTKTVAAVSKTKAVAAAVKPKAKE 425
K A KG+KK KA V KPK AKV A KPK+K+VAAVSKTKAVAA KPKAKE
Sbjct: 167 KAAAKGTKKPAAKVVAKAKVTAKPK-AKVTAA--KPKSKSVAAVSKTKAVAA--KPKAKE 221
Query: 424 RPVKAGRTLTRTFPGKKKAAPPVKKAAAAVIKKAKAKAPAKSGKGKAVKFPGKRVSTRK 248
RP KA RT TRT PGKK AAP K A KAPAKS K VK P KR STRK
Sbjct: 222 RPAKASRTSTRTSPGKKVAAPAKKVAVT-------KKAPAKSVK---VKSPAKRASTRK 270
>TAIR9_protein||AT1G06760.1 | Symbols: | histone H1, putative |
chr1:2076687-2077616 REVERSE
Length = 275
Score = 72 bits (176), Expect = 2e-013
Identities = 49/108 (45%), Positives = 54/108 (50%), Gaps = 5/108 (4%)
Frame = -1
Query: 568 SKKTKAAVAVKPK--AAKVVAVKPKPKTKTVAAVSKTKAVAAAVKPKAKERPVKAGRTLT 395
+ K K +AVKPK AAK V K K K A + TK A KPKAK RP KA +T
Sbjct: 167 ASKAKKTIAVKPKTAAAKKVTAKAKAKPVPRATAAATKRKAVDAKPKAKARPAKAAKTAK 226
Query: 394 RTFPGKKKAAPPVKKAAAAVIKKAKAKAPAKSGKGKAVKFPGKRVSTR 251
T P KK A K A A KK K K K K VK P KR S+R
Sbjct: 227 VTSPAKKAVAATKKVATVATKKKTPVK---KVVKPKTVKSPAKRASSR 271
Score = 49 bits (115), Expect = 2e-006
Identities = 43/111 (38%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Frame = -1
Query: 553 AAVAVKPKAAKVVAVKPKPKTKTVAAVSKTKAVAAAVKPKAKERPVKAGRTLTRTFPGKK 374
+A A PKAA + K K TVA + VAAA K K K VK + K
Sbjct: 132 SAKASSPKAAAEKSAPAKKKPATVAVTKAKRKVAAASKAK-KTIAVKPKTAAAKKVTAKA 190
Query: 373 KAAPPVKKAAAAVIKKA-----KAKA-PAKSGKGKAVKFPGKR--VSTRKV 245
KA P + AAA +KA KAKA PAK+ K V P K+ +T+KV
Sbjct: 191 KAKPVPRATAAATKRKAVDAKPKAKARPAKAAKTAKVTSPAKKAVAATKKV 241
Score = 49 bits (115), Expect = 2e-006
Identities = 40/108 (37%), Positives = 46/108 (42%), Gaps = 6/108 (5%)
Frame = -1
Query: 586 KPAGKGSKKTKAAVAVKPKAAKVVAVKPK-PKTKTVAAVSKTKAVAAAVKPKAKERPVKA 410
KPA K K VA KA K +AVKPK K V A +K K V A K + V A
Sbjct: 151 KPATVAVTKAKRKVAAASKAKKTIAVKPKTAAAKKVTAKAKAKPVPRATAAATKRKAVDA 210
Query: 409 GRTLTRTFPGK----KKAAPPVKKAAAAVIKKAKAKAPAKSGKGKAVK 278
+ + P K K P KKA AA K A K+ K VK
Sbjct: 211 -KPKAKARPAKAAKTAKVTSPAKKAVAATKKVATVATKKKTPVKKVVK 257
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,144,088,838
Number of Sequences: 33410
Number of Extensions: 25144088838
Number of Successful Extensions: 809152242
Number of sequences better than 0.0: 0
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