BLASTX 7.6.2
Query= UN53773 /QuerySize=849
(848 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|301133570|gb|ADK63407.1| zinc finger protein [Brassica rapa] 394 8e-108
gi|17981378|gb|AAL50981.1|AF453322_1 zinc finger protein LSD1 [B... 385 5e-105
gi|17981380|gb|AAL50982.1|AF453323_1 zinc finger protein LSD2 [B... 359 3e-097
gi|30685085|ref|NP_849549.1| zinc finger protein LSD1 [Arabidops... 309 5e-082
gi|297804100|ref|XP_002869934.1| hypothetical protein ARALYDRAFT... 303 3e-080
gi|30685083|ref|NP_849548.1| zinc finger protein LSD1 [Arabidops... 299 6e-079
gi|227204487|dbj|BAH57095.1| AT4G20380 [Arabidopsis thaliana] 296 3e-078
gi|296089240|emb|CBI39012.3| unnamed protein product [Vitis vini... 237 2e-060
gi|255641264|gb|ACU20909.1| unknown [Glycine max] 223 3e-056
gi|305387471|gb|ADM52200.1| zinc finger protein LSD1 [Pisum sati... 219 5e-055
gi|225444223|ref|XP_002276731.1| PREDICTED: hypothetical protein... 217 2e-054
gi|217075336|gb|ACJ86028.1| unknown [Medicago truncatula] 210 2e-052
gi|170780164|gb|ACB37312.1| LSD1-like protein [Hordeum vulgare s... 207 2e-051
gi|255578021|ref|XP_002529881.1| Charged multivesicular body pro... 203 3e-050
gi|224115560|ref|XP_002317066.1| predicted protein [Populus tric... 197 3e-048
gi|32400832|gb|AAP80648.1|AF475127_1 18S subunit ribosomal prote... 181 1e-043
gi|238480867|ref|NP_001154257.1| zinc finger protein LSD1 [Arabi... 170 3e-040
>gi|301133570|gb|ADK63407.1| zinc finger protein [Brassica rapa]
Length = 191
Score = 394 bits (1012), Expect = 8e-108
Identities = 186/192 (96%), Positives = 189/192 (98%), Gaps = 1/192 (0%)
Frame = +1
Query: 172 MQDQLVCHGCRNTLMYPRGATNVRCALCHIVNMVPLHPPPPPHHHAAHAGMDMAHIVCGG 351
MQDQLVCHGCRNTLMYPRGATNVRCALCHIVNMVPLHP PPP HH AHAGMDMAHIVCGG
Sbjct: 1 MQDQLVCHGCRNTLMYPRGATNVRCALCHIVNMVPLHPHPPPPHH-AHAGMDMAHIVCGG 59
Query: 352 CRTMLMYTRGATSVRCSCCQTVNLVPGPPPSNQVAHINCGNCRTTLMYPYGASSVKCAIC 531
CRTMLMYTRGA+SVRCSCCQTVNLVPGPPPSNQVAHINCGNCRTTLMYPYGASSVKCA+C
Sbjct: 60 CRTMLMYTRGASSVRCSCCQTVNLVPGPPPSNQVAHINCGNCRTTLMYPYGASSVKCAVC 119
Query: 532 QFVTNVNVSNGRVPLASNRPNGTASPGTMPSTSTQSTPPSQTQTVVVENPMSVNESGKLV 711
QFVTNVN+SNGRVPLASNRPNGTASPGTMPSTSTQSTPPSQTQTVVVENPMSVNESGKLV
Sbjct: 120 QFVTNVNMSNGRVPLASNRPNGTASPGTMPSTSTQSTPPSQTQTVVVENPMSVNESGKLV 179
Query: 712 SNVVVGVTTGQK 747
SNVVVGVTTGQK
Sbjct: 180 SNVVVGVTTGQK 191
>gi|17981378|gb|AAL50981.1|AF453322_1 zinc finger protein LSD1 [Brassica
oleracea]
Length = 193
Score = 385 bits (988), Expect = 5e-105
Identities = 184/194 (94%), Positives = 188/194 (96%), Gaps = 3/194 (1%)
Frame = +1
Query: 172 MQDQLVCHGCRNTLMYPRGATNVRCALCHIVNMVPL--HPPPPPHHHAAHAGMDMAHIVC 345
MQDQLVCHGCRNTLMYPRGATNVRCALCHIVNMVPL HPPPPP H AHAGMDMAHIVC
Sbjct: 1 MQDQLVCHGCRNTLMYPRGATNVRCALCHIVNMVPLHPHPPPPPPPHHAHAGMDMAHIVC 60
Query: 346 GGCRTMLMYTRGATSVRCSCCQTVNLVPGPPPSNQVAHINCGNCRTTLMYPYGASSVKCA 525
GGCRTMLMYTRGA+SVRCSCCQTVNLVPGPPPSNQVAHINCGNCRTTLMYPYGASSVKCA
Sbjct: 61 GGCRTMLMYTRGASSVRCSCCQTVNLVPGPPPSNQVAHINCGNCRTTLMYPYGASSVKCA 120
Query: 526 ICQFVTNVNVSNGRVPLASNRPNGTASPGTMPSTSTQSTPPSQTQTVVVENPMSVNESGK 705
+CQFVTNVN+SNGRVPLASNRPNGTA+PGTMPSTST STPPSQTQTVVVENPMSVNESGK
Sbjct: 121 VCQFVTNVNMSNGRVPLASNRPNGTAAPGTMPSTST-STPPSQTQTVVVENPMSVNESGK 179
Query: 706 LVSNVVVGVTTGQK 747
LVSNVVVGVTTGQK
Sbjct: 180 LVSNVVVGVTTGQK 193
>gi|17981380|gb|AAL50982.1|AF453323_1 zinc finger protein LSD2 [Brassica
oleracea]
Length = 193
Score = 359 bits (921), Expect = 3e-097
Identities = 167/193 (86%), Positives = 180/193 (93%), Gaps = 2/193 (1%)
Frame = +1
Query: 172 MQDQLVCHGCRNTLMYPRGATNVRCALCHIVNMVPLHPPPPPHHHAAHAGMDMAHIVCGG 351
MQDQL+CHGCRNTL+YPRGATNVRCALC+ +NMVPLHPPPPP HH AHAGMDMAHIVCGG
Sbjct: 1 MQDQLMCHGCRNTLLYPRGATNVRCALCNTINMVPLHPPPPPPHH-AHAGMDMAHIVCGG 59
Query: 352 CRTMLMYTRGATSVRCSCCQTVNLVPGPPPSNQVAHINCGNCRTTLMYPYGASSVKCAIC 531
CRTMLMYTRGA+SVRCSCCQTVNLVP PP+NQ AH+NCGNCRTTLMYPYGA SV+CA+C
Sbjct: 60 CRTMLMYTRGASSVRCSCCQTVNLVPATPPTNQPAHVNCGNCRTTLMYPYGAPSVRCAVC 119
Query: 532 QFVTNVNVSNGRVPLASNRPNGTA-SPGTMPSTSTQSTPPSQTQTVVVENPMSVNESGKL 708
QFVTNVN+ NGRVP +N+PNGTA SPG MPSTSTQSTPPSQTQTVVVENPMSVNESGKL
Sbjct: 120 QFVTNVNMGNGRVPFPTNQPNGTASSPGPMPSTSTQSTPPSQTQTVVVENPMSVNESGKL 179
Query: 709 VSNVVVGVTTGQK 747
VSNVVVGVTT +K
Sbjct: 180 VSNVVVGVTTDKK 192
>gi|30685085|ref|NP_849549.1| zinc finger protein LSD1 [Arabidopsis thaliana]
Length = 189
Score = 309 bits (790), Expect = 5e-082
Identities = 155/195 (79%), Positives = 166/195 (85%), Gaps = 20/195 (10%)
Frame = +1
Query: 169 DMQDQLVCHGCRNTLMYPRGATNVRCALCHIVNMVPLHPPPPPHHHAAHAGMDMAHIVCG 348
DMQDQLVCHGCRN LMYPRGA+NVRCALC+ +NMVP PPPPPH DMAHI+CG
Sbjct: 5 DMQDQLVCHGCRNLLMYPRGASNVRCALCNTINMVP--PPPPPH--------DMAHIICG 54
Query: 349 GCRTMLMYTRGATSVRCSCCQTVNLVP------GPPPSNQVAHINCGNCRTTLMYPYGAS 510
GCRTMLMYTRGA+SVRCSCCQT NLVP PS+QVA INCG+CRTTLMYPYGAS
Sbjct: 55 GCRTMLMYTRGASSVRCSCCQTTNLVPAHSNQVAHAPSSQVAQINCGHCRTTLMYPYGAS 114
Query: 511 SVKCAICQFVTNVNVSNGRVPLASNRPNGTASPGTMPSTSTQSTPPSQTQTVVVENPMSV 690
SVKCA+CQFVTNVN+SNGRVPL +NRPNGTA P PSTST STPPSQTQTVVVENPMSV
Sbjct: 115 SVKCAVCQFVTNVNMSNGRVPLPTNRPNGTACP---PSTST-STPPSQTQTVVVENPMSV 170
Query: 691 NESGKLVSNVVVGVT 735
+ESGKLVSNVVVGVT
Sbjct: 171 DESGKLVSNVVVGVT 185
>gi|297804100|ref|XP_002869934.1| hypothetical protein ARALYDRAFT_492829
[Arabidopsis lyrata subsp. lyrata]
Length = 184
Score = 303 bits (774), Expect = 3e-080
Identities = 149/190 (78%), Positives = 161/190 (84%), Gaps = 20/190 (10%)
Frame = +1
Query: 184 LVCHGCRNTLMYPRGATNVRCALCHIVNMVPLHPPPPPHHHAAHAGMDMAHIVCGGCRTM 363
LVCHGCRN LMYPRGA+NVRCALC+ +NMVP PPPPPH DMAHI+CGGCRTM
Sbjct: 5 LVCHGCRNLLMYPRGASNVRCALCNTINMVP--PPPPPH--------DMAHIICGGCRTM 54
Query: 364 LMYTRGATSVRCSCCQTVNLVP------GPPPSNQVAHINCGNCRTTLMYPYGASSVKCA 525
LMYTRGA+SVRCSCCQT NLVP PSNQVA INCG+CRTTLMYPYGASSVKCA
Sbjct: 55 LMYTRGASSVRCSCCQTTNLVPAHSNQVAHAPSNQVAQINCGHCRTTLMYPYGASSVKCA 114
Query: 526 ICQFVTNVNVSNGRVPLASNRPNGTASPGTMPSTSTQSTPPSQTQTVVVENPMSVNESGK 705
+CQFVTNVN+SNGRVPL +NRPNG+A PGTMPS STPPSQTQTVVVENPMSV+ESGK
Sbjct: 115 VCQFVTNVNMSNGRVPLPTNRPNGSACPGTMPS----STPPSQTQTVVVENPMSVDESGK 170
Query: 706 LVSNVVVGVT 735
LV+NVVVGVT
Sbjct: 171 LVTNVVVGVT 180
>gi|30685083|ref|NP_849548.1| zinc finger protein LSD1 [Arabidopsis thaliana]
Length = 184
Score = 299 bits (763), Expect = 6e-079
Identities = 150/190 (78%), Positives = 161/190 (84%), Gaps = 20/190 (10%)
Frame = +1
Query: 184 LVCHGCRNTLMYPRGATNVRCALCHIVNMVPLHPPPPPHHHAAHAGMDMAHIVCGGCRTM 363
LVCHGCRN LMYPRGA+NVRCALC+ +NMVP PPPPPH DMAHI+CGGCRTM
Sbjct: 5 LVCHGCRNLLMYPRGASNVRCALCNTINMVP--PPPPPH--------DMAHIICGGCRTM 54
Query: 364 LMYTRGATSVRCSCCQTVNLVP------GPPPSNQVAHINCGNCRTTLMYPYGASSVKCA 525
LMYTRGA+SVRCSCCQT NLVP PS+QVA INCG+CRTTLMYPYGASSVKCA
Sbjct: 55 LMYTRGASSVRCSCCQTTNLVPAHSNQVAHAPSSQVAQINCGHCRTTLMYPYGASSVKCA 114
Query: 526 ICQFVTNVNVSNGRVPLASNRPNGTASPGTMPSTSTQSTPPSQTQTVVVENPMSVNESGK 705
+CQFVTNVN+SNGRVPL +NRPNGTA P PSTST STPPSQTQTVVVENPMSV+ESGK
Sbjct: 115 VCQFVTNVNMSNGRVPLPTNRPNGTACP---PSTST-STPPSQTQTVVVENPMSVDESGK 170
Query: 706 LVSNVVVGVT 735
LVSNVVVGVT
Sbjct: 171 LVSNVVVGVT 180
>gi|227204487|dbj|BAH57095.1| AT4G20380 [Arabidopsis thaliana]
Length = 218
Score = 296 bits (757), Expect = 3e-078
Identities = 148/188 (78%), Positives = 159/188 (84%), Gaps = 20/188 (10%)
Frame = +1
Query: 169 DMQDQLVCHGCRNTLMYPRGATNVRCALCHIVNMVPLHPPPPPHHHAAHAGMDMAHIVCG 348
DMQDQLVCHGCRN LMYPRGA+NVRCALC+ +NMVP PPPPPH DMAHI+CG
Sbjct: 5 DMQDQLVCHGCRNLLMYPRGASNVRCALCNTINMVP--PPPPPH--------DMAHIICG 54
Query: 349 GCRTMLMYTRGATSVRCSCCQTVNLVP------GPPPSNQVAHINCGNCRTTLMYPYGAS 510
GCRTMLMYTRGA+SVRCSCCQT NLVP PS+QVA INCG+CRTTLMYPYGAS
Sbjct: 55 GCRTMLMYTRGASSVRCSCCQTTNLVPAHSNQVAHAPSSQVAQINCGHCRTTLMYPYGAS 114
Query: 511 SVKCAICQFVTNVNVSNGRVPLASNRPNGTASPGTMPSTSTQSTPPSQTQTVVVENPMSV 690
SVKCA+CQFVTNVN+SNGRVPL +NRPNGTA P PSTST STPPSQTQTVVVENPMSV
Sbjct: 115 SVKCAVCQFVTNVNMSNGRVPLPTNRPNGTACP---PSTST-STPPSQTQTVVVENPMSV 170
Query: 691 NESGKLVS 714
+ESGKLVS
Sbjct: 171 DESGKLVS 178
>gi|296089240|emb|CBI39012.3| unnamed protein product [Vitis vinifera]
Length = 259
Score = 237 bits (604), Expect = 2e-060
Identities = 120/194 (61%), Positives = 143/194 (73%), Gaps = 21/194 (10%)
Frame = +1
Query: 145 EKSRHKQRDMQDQLVCHGCRNTLMYPRGATNVRCALCHIVNMVPLHPPPPPHHHAAHAGM 324
E+ Q MQ L+C+GCR+ L+YPRGATNV CALC+ V VP PP G+
Sbjct: 80 ERKFSYQSAMQSHLMCNGCRSILVYPRGATNVCCALCNSVTSVP--PP----------GL 127
Query: 325 DMAHIVCGGCRTMLMYTRGATSVRCSCCQTVNLVPGPPPSNQVAHINCGNCRTTLMYPYG 504
+MA ++CGGCRT+LMYTRGATSVRCSCC TVNL P PSNQVAH+NCGNCRTTLMYPYG
Sbjct: 128 EMAQLICGGCRTLLMYTRGATSVRCSCCHTVNLAPA--PSNQVAHVNCGNCRTTLMYPYG 185
Query: 505 ASSVKCAICQFVTNVNVSNGRVPLASNRPNGTASPGTMPSTSTQSTPPSQTQTVVVENPM 684
A SVKCA+C +VT+V + N RVP+ +RPN A + PSTS+ +QTVVV+NPM
Sbjct: 186 APSVKCAVCHYVTSVGMVNVRVPIPVHRPNAAAISASTPSTSS-------SQTVVVKNPM 238
Query: 685 SVNESGKLVSNVVV 726
SV+ESGKLVSNVVV
Sbjct: 239 SVDESGKLVSNVVV 252
>gi|255641264|gb|ACU20909.1| unknown [Glycine max]
Length = 177
Score = 223 bits (567), Expect = 3e-056
Identities = 105/140 (75%), Positives = 123/140 (87%), Gaps = 3/140 (2%)
Frame = +1
Query: 319 GMDMAHIVCGGCRTMLMYTRGATSVRCSCCQTVNLVPGPPPSNQVAHINCGNCRTTLMYP 498
GM+M+ + CGGCRT+LMYTRGATSVRCSCC TVNLV PP SNQVAH++CGNCRTTLMYP
Sbjct: 38 GMEMSQLYCGGCRTLLMYTRGATSVRCSCCHTVNLV--PPASNQVAHVHCGNCRTTLMYP 95
Query: 499 YGASSVKCAICQFVTNVNVSNGRVPLASNRPNGTASPGTMPSTSTQSTPPSQTQTVVVEN 678
YGA SVKCA+C F+TNV+ +NGR+P+ +RPNGT + GT+P+TST S P SQ+QTVVVEN
Sbjct: 96 YGAPSVKCALCHFITNVSTNNGRLPIPVHRPNGTTNAGTLPTTST-SMPQSQSQTVVVEN 154
Query: 679 PMSVNESGKLVSNVVVGVTT 738
PMSV+ SGKLVSNVVVGVTT
Sbjct: 155 PMSVDSSGKLVSNVVVGVTT 174
>gi|305387471|gb|ADM52200.1| zinc finger protein LSD1 [Pisum sativum]
Length = 176
Score = 219 bits (557), Expect = 5e-055
Identities = 105/140 (75%), Positives = 119/140 (85%), Gaps = 4/140 (2%)
Frame = +1
Query: 319 GMDMAHIVCGGCRTMLMYTRGATSVRCSCCQTVNLVPGPPPSNQVAHINCGNCRTTLMYP 498
GMDM+ + CGGCRT+LMYTRGATSVRCSCC TVNL P SNQVAH+ C NCRTTLMYP
Sbjct: 38 GMDMSQLYCGGCRTLLMYTRGATSVRCSCCHTVNLA---PVSNQVAHVPCANCRTTLMYP 94
Query: 499 YGASSVKCAICQFVTNVNVSNGRVPLASNRPNGTASPGTMPSTSTQSTPPSQTQTVVVEN 678
YGA SVKCA+C ++TN+N+SNGRVP+ +NRP GT + GT+PSTST S P SQ QTVVVEN
Sbjct: 95 YGAPSVKCAVCHYITNINMSNGRVPVPANRPQGTTNLGTLPSTST-SMPQSQGQTVVVEN 153
Query: 679 PMSVNESGKLVSNVVVGVTT 738
PMSV+ SGKLVSNVVVGVTT
Sbjct: 154 PMSVDSSGKLVSNVVVGVTT 173
>gi|225444223|ref|XP_002276731.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 171
Score = 217 bits (552), Expect = 2e-054
Identities = 110/171 (64%), Positives = 129/171 (75%), Gaps = 21/171 (12%)
Frame = +1
Query: 214 MYPRGATNVRCALCHIVNMVPLHPPPPPHHHAAHAGMDMAHIVCGGCRTMLMYTRGATSV 393
+YPRGATNV CALC+ V VP PP G++MA ++CGGCRT+LMYTRGATSV
Sbjct: 15 VYPRGATNVCCALCNSVTSVP--PP----------GLEMAQLICGGCRTLLMYTRGATSV 62
Query: 394 RCSCCQTVNLVPGPPPSNQVAHINCGNCRTTLMYPYGASSVKCAICQFVTNVNVSNGRVP 573
RCSCC TVNL P PSNQVAH+NCGNCRTTLMYPYGA SVKCA+C +VT+V + N RVP
Sbjct: 63 RCSCCHTVNLAPA--PSNQVAHVNCGNCRTTLMYPYGAPSVKCAVCHYVTSVGMVNVRVP 120
Query: 574 LASNRPNGTASPGTMPSTSTQSTPPSQTQTVVVENPMSVNESGKLVSNVVV 726
+ +RPN A + PSTS+ +QTVVV+NPMSV+ESGKLVSNVVV
Sbjct: 121 IPVHRPNAAAISASTPSTSS-------SQTVVVKNPMSVDESGKLVSNVVV 164
>gi|217075336|gb|ACJ86028.1| unknown [Medicago truncatula]
Length = 176
Score = 210 bits (534), Expect = 2e-052
Identities = 100/140 (71%), Positives = 117/140 (83%), Gaps = 4/140 (2%)
Frame = +1
Query: 319 GMDMAHIVCGGCRTMLMYTRGATSVRCSCCQTVNLVPGPPPSNQVAHINCGNCRTTLMYP 498
GMDM+ + CGGCRT+LMYTRGATSVRCSCC TVNL P SNQVAH+ CGN RTTLMYP
Sbjct: 38 GMDMSQLYCGGCRTLLMYTRGATSVRCSCCHTVNLA---PVSNQVAHVPCGNYRTTLMYP 94
Query: 499 YGASSVKCAICQFVTNVNVSNGRVPLASNRPNGTASPGTMPSTSTQSTPPSQTQTVVVEN 678
YGA SVKC +C ++TN+N+SNGR+P+ +RP+GT G +PSTST S P SQ+QTVVVEN
Sbjct: 95 YGAPSVKCVVCHYITNINMSNGRLPIPGHRPHGTTDSGMLPSTST-SMPQSQSQTVVVEN 153
Query: 679 PMSVNESGKLVSNVVVGVTT 738
PMSV+ SGKLVS+VVVGVTT
Sbjct: 154 PMSVDSSGKLVSDVVVGVTT 173
>gi|170780164|gb|ACB37312.1| LSD1-like protein [Hordeum vulgare subsp. vulgare]
Length = 179
Score = 207 bits (525), Expect = 2e-051
Identities = 105/178 (58%), Positives = 128/178 (71%), Gaps = 16/178 (8%)
Frame = +1
Query: 211 LMYPRGATNVRCALCHIVNMVPLHPPPPPHHHAAHAGMDMAHIVCGGCRTMLMYTRGATS 390
L+YPRGA +V CA+CH V P PP GM+MA ++C GCRT+LMYTR AT+
Sbjct: 14 LLYPRGAPSVCCAVCHAVTSAP--PP----------GMEMAQLICVGCRTLLMYTRNATT 61
Query: 391 VRCSCCQTVNLVPGPPPSNQVAHINCGNCRTTLMYPYGASSVKCAICQFVTNVNVSNGR- 567
VRCSCC TVNL PP N +AH+NCG C+T LMYPYGASSVKCAIC F+TN+ ++ R
Sbjct: 62 VRCSCCDTVNLARPAPPVNSIAHVNCGQCQTVLMYPYGASSVKCAICNFITNIGMNTMRP 121
Query: 568 VPLASNRPNGTASPGTMPSTSTQSTPPSQTQTVVVENPMSVNESGKLVSNVVVGVTTG 741
+P + PNG + ++PSTS ST SQ TVVVENPM+V++ GKLVSNVVVGVTTG
Sbjct: 122 LPATMHAPNGISY--SVPSTSAPST-QSQNVTVVVENPMTVDDKGKLVSNVVVGVTTG 176
>gi|255578021|ref|XP_002529881.1| Charged multivesicular body protein 2b-B,
putative [Ricinus communis]
Length = 405
Score = 203 bits (516), Expect = 3e-050
Identities = 102/139 (73%), Positives = 115/139 (82%), Gaps = 6/139 (4%)
Frame = +1
Query: 319 GMDMAHIVCGGCRTMLMYTRGATSVRCSCCQTVNLVPGPPPSNQVAHINCGNCRTTLMYP 498
GM+MA ++CGGCRT+LM+TRGATSVRCSCC TVNL P S Q AHINC NCRTTL+YP
Sbjct: 270 GMEMAQLICGGCRTLLMHTRGATSVRCSCCHTVNLA---PVSGQAAHINCRNCRTTLVYP 326
Query: 499 YGASSVKCAICQFVTNVNVSNGRVPLASNRPNGTASPGTMPSTSTQSTPPSQTQTVVVEN 678
YGA SVKCA+C +VTNV++ N RV L +NRPNGT G PSTST ST SQTQTVVVEN
Sbjct: 327 YGAPSVKCALCHYVTNVSMGNVRVALPTNRPNGTT--GMTPSTST-STSQSQTQTVVVEN 383
Query: 679 PMSVNESGKLVSNVVVGVT 735
PMSV+ESGKLVSNVVVG+T
Sbjct: 384 PMSVDESGKLVSNVVVGIT 402
>gi|224115560|ref|XP_002317066.1| predicted protein [Populus trichocarpa]
Length = 179
Score = 197 bits (499), Expect = 3e-048
Identities = 99/146 (67%), Positives = 115/146 (78%), Gaps = 7/146 (4%)
Frame = +1
Query: 319 GMDMAHIVCGGCRTMLMYTRGATSVRCSCCQTVNLVPGPPPSNQVAHINCGNCRTTLMYP 498
GMD+A ++C GCRT+LMY RGAT+VRCSCC VN P P NQVAH+NCGNC+TTLMYP
Sbjct: 38 GMDLAQLICRGCRTLLMYARGATTVRCSCCHIVNFAPVGP--NQVAHVNCGNCQTTLMYP 95
Query: 499 YGASSVKCAICQFVTNVNVSNGRVPLASNRPNGTASPGTMPSTSTQST---PPSQTQTVV 669
GA SVKCA+C +VTN++ +N RVPL +NRP+G GTMPSTST S TQTVV
Sbjct: 96 NGAPSVKCAVCHYVTNISTANVRVPLPANRPSGIG--GTMPSTSTVSNWTYFSFLTQTVV 153
Query: 670 VENPMSVNESGKLVSNVVVGVTTGQK 747
VENPMSV+ESGKLVSNVVVGVTT +K
Sbjct: 154 VENPMSVDESGKLVSNVVVGVTTEKK 179
>gi|32400832|gb|AAP80648.1|AF475127_1 18S subunit ribosomal protein [Triticum
aestivum]
Length = 154
Score = 181 bits (458), Expect = 1e-043
Identities = 90/152 (59%), Positives = 110/152 (72%), Gaps = 4/152 (2%)
Frame = +1
Query: 289 PPPHHHAAHAGMDMAHIVCGGCRTMLMYTRGATSVRCSCCQTVNLVPGPPPSNQVAHINC 468
P H AA MA ++C GCRT+LMYTR AT+VRCSCC TVNL PP N +AH+NC
Sbjct: 3 PCRHQRAASRXWXMAQLICVGCRTLLMYTRNATTVRCSCCDTVNLARPAPPVNSIAHVNC 62
Query: 469 GNCRTTLMYPYGASSVKCAICQFVTNVNVSNGR-VPLASNRPNGTASPGTMPSTSTQSTP 645
G C+T LMYPYGASSVKCAIC F+TN+ ++ R +P + PNG + ++PSTS S
Sbjct: 63 GQCQTVLMYPYGASSVKCAICNFITNIGMNTVRPLPPTMHAPNGISY--SVPSTSAPSA- 119
Query: 646 PSQTQTVVVENPMSVNESGKLVSNVVVGVTTG 741
SQ TVVVENPM+V++ GKLVSNVVVGVT+G
Sbjct: 120 QSQNVTVVVENPMTVDDKGKLVSNVVVGVTSG 151
>gi|238480867|ref|NP_001154257.1| zinc finger protein LSD1 [Arabidopsis
thaliana]
Length = 210
Score = 170 bits (430), Expect = 3e-040
Identities = 86/99 (86%), Positives = 92/99 (92%), Gaps = 4/99 (4%)
Frame = +1
Query: 439 PSNQVAHINCGNCRTTLMYPYGASSVKCAICQFVTNVNVSNGRVPLASNRPNGTASPGTM 618
PS+QVA INCG+CRTTLMYPYGASSVKCA+CQFVTNVN+SNGRVPL +NRPNGTA P
Sbjct: 112 PSSQVAQINCGHCRTTLMYPYGASSVKCAVCQFVTNVNMSNGRVPLPTNRPNGTACP--- 168
Query: 619 PSTSTQSTPPSQTQTVVVENPMSVNESGKLVSNVVVGVT 735
PSTST STPPSQTQTVVVENPMSV+ESGKLVSNVVVGVT
Sbjct: 169 PSTST-STPPSQTQTVVVENPMSVDESGKLVSNVVVGVT 206
Score = 100 bits (247), Expect = 4e-019
Identities = 41/66 (62%), Positives = 52/66 (78%)
Frame = +1
Query: 337 IVCGGCRTMLMYTRGATSVRCSCCQTVNLVPGPPPSNQVAHINCGNCRTTLMYPYGASSV 516
+VC GCR +LMY RGA++VRC+ C T+N+VP PPP + +AHI CG CRT LMY GASSV
Sbjct: 5 LVCHGCRNLLMYPRGASNVRCALCNTINMVPPPPPPHDMAHIICGGCRTMLMYTRGASSV 64
Query: 517 KCAICQ 534
+C+ CQ
Sbjct: 65 RCSCCQ 70
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,680,125,884,373
Number of Sequences: 15229318
Number of Extensions: 5680125884373
Number of Successful Extensions: 1311504089
Number of sequences better than 0.0: 0
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