BLASTX 7.6.2
Query= UN53773 /QuerySize=849
(848 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G20380.2 | Symbols: LSD1 | zinc finger protein... 314 6e-086
TAIR9_protein||AT4G20380.7 | Symbols: LSD1 | zinc finger protein... 312 3e-085
TAIR9_protein||AT4G20380.1 | Symbols: LSD1 | zinc finger protein... 311 5e-085
TAIR9_protein||AT4G20380.3 | Symbols: LSD1 | zinc finger protein... 309 2e-084
TAIR9_protein||AT4G20380.4 | Symbols: LSD1 | zinc finger protein... 309 2e-084
TAIR9_protein||AT4G20380.5 | Symbols: LSD1 | zinc finger protein... 309 2e-084
TAIR9_protein||AT4G20380.6 | Symbols: LSD1 | zinc finger protein... 309 2e-084
TAIR9_protein||AT4G20380.8 | Symbols: | zinc finger protein (LS... 172 3e-043
>TAIR9_protein||AT4G20380.2 | Symbols: LSD1 | zinc finger protein (LSD1) |
chr4:11005012-11006438 FORWARD
Length = 190
Score = 314 bits (803), Expect = 6e-086
Identities = 158/203 (77%), Positives = 170/203 (83%), Gaps = 20/203 (9%)
Frame = +1
Query: 160 KQRDMQDQLVCHGCRNTLMYPRGATNVRCALCHIVNMVPLHPPPPPHHHAAHAGMDMAHI 339
K DMQDQLVCHGCRN LMYPRGA+NVRCALC+ +NMVP PPPPPH DMAHI
Sbjct: 2 KVADMQDQLVCHGCRNLLMYPRGASNVRCALCNTINMVP--PPPPPH--------DMAHI 51
Query: 340 VCGGCRTMLMYTRGATSVRCSCCQTVNLVP------GPPPSNQVAHINCGNCRTTLMYPY 501
+CGGCRTMLMYTRGA+SVRCSCCQT NLVP PS+QVA INCG+CRTTLMYPY
Sbjct: 52 ICGGCRTMLMYTRGASSVRCSCCQTTNLVPAHSNQVAHAPSSQVAQINCGHCRTTLMYPY 111
Query: 502 GASSVKCAICQFVTNVNVSNGRVPLASNRPNGTASPGTMPSTSTQSTPPSQTQTVVVENP 681
GASSVKCA+CQFVTNVN+SNGRVPL +NRPNGTA P PSTST STPPSQTQTVVVENP
Sbjct: 112 GASSVKCAVCQFVTNVNMSNGRVPLPTNRPNGTACP---PSTST-STPPSQTQTVVVENP 167
Query: 682 MSVNESGKLVSNVVVGVTTGQK* 750
MSV+ESGKLVSNVVVGVTT +K*
Sbjct: 168 MSVDESGKLVSNVVVGVTTDKK* 190
>TAIR9_protein||AT4G20380.7 | Symbols: LSD1 | zinc finger protein (LSD1) |
chr4:11005012-11006438 FORWARD
Length = 190
Score = 312 bits (797), Expect = 3e-085
Identities = 157/199 (78%), Positives = 168/199 (84%), Gaps = 20/199 (10%)
Frame = +1
Query: 160 KQRDMQDQLVCHGCRNTLMYPRGATNVRCALCHIVNMVPLHPPPPPHHHAAHAGMDMAHI 339
K DMQDQLVCHGCRN LMYPRGA+NVRCALC+ +NMVP PPPPPH DMAHI
Sbjct: 2 KVADMQDQLVCHGCRNLLMYPRGASNVRCALCNTINMVP--PPPPPH--------DMAHI 51
Query: 340 VCGGCRTMLMYTRGATSVRCSCCQTVNLVP------GPPPSNQVAHINCGNCRTTLMYPY 501
+CGGCRTMLMYTRGA+SVRCSCCQT NLVP PS+QVA INCG+CRTTLMYPY
Sbjct: 52 ICGGCRTMLMYTRGASSVRCSCCQTTNLVPAHSNQVAHAPSSQVAQINCGHCRTTLMYPY 111
Query: 502 GASSVKCAICQFVTNVNVSNGRVPLASNRPNGTASPGTMPSTSTQSTPPSQTQTVVVENP 681
GASSVKCA+CQFVTNVN+SNGRVPL +NRPNGTA P PSTST STPPSQTQTVVVENP
Sbjct: 112 GASSVKCAVCQFVTNVNMSNGRVPLPTNRPNGTACP---PSTST-STPPSQTQTVVVENP 167
Query: 682 MSVNESGKLVSNVVVGVTT 738
MSV+ESGKLVSNVVVGVTT
Sbjct: 168 MSVDESGKLVSNVVVGVTT 186
>TAIR9_protein||AT4G20380.1 | Symbols: LSD1 | zinc finger protein (LSD1) |
chr4:11005027-11006438 FORWARD
Length = 185
Score = 311 bits (795), Expect = 5e-085
Identities = 156/199 (78%), Positives = 168/199 (84%), Gaps = 20/199 (10%)
Frame = +1
Query: 172 MQDQLVCHGCRNTLMYPRGATNVRCALCHIVNMVPLHPPPPPHHHAAHAGMDMAHIVCGG 351
MQDQLVCHGCRN LMYPRGA+NVRCALC+ +NMVP PPPPPH DMAHI+CGG
Sbjct: 1 MQDQLVCHGCRNLLMYPRGASNVRCALCNTINMVP--PPPPPH--------DMAHIICGG 50
Query: 352 CRTMLMYTRGATSVRCSCCQTVNLVP------GPPPSNQVAHINCGNCRTTLMYPYGASS 513
CRTMLMYTRGA+SVRCSCCQT NLVP PS+QVA INCG+CRTTLMYPYGASS
Sbjct: 51 CRTMLMYTRGASSVRCSCCQTTNLVPAHSNQVAHAPSSQVAQINCGHCRTTLMYPYGASS 110
Query: 514 VKCAICQFVTNVNVSNGRVPLASNRPNGTASPGTMPSTSTQSTPPSQTQTVVVENPMSVN 693
VKCA+CQFVTNVN+SNGRVPL +NRPNGTA P PSTST STPPSQTQTVVVENPMSV+
Sbjct: 111 VKCAVCQFVTNVNMSNGRVPLPTNRPNGTACP---PSTST-STPPSQTQTVVVENPMSVD 166
Query: 694 ESGKLVSNVVVGVTTGQK* 750
ESGKLVSNVVVGVTT +K*
Sbjct: 167 ESGKLVSNVVVGVTTDKK* 185
>TAIR9_protein||AT4G20380.3 | Symbols: LSD1 | zinc finger protein (LSD1) |
chr4:11005027-11006438 FORWARD
Length = 185
Score = 309 bits (789), Expect = 2e-084
Identities = 155/195 (79%), Positives = 166/195 (85%), Gaps = 20/195 (10%)
Frame = +1
Query: 172 MQDQLVCHGCRNTLMYPRGATNVRCALCHIVNMVPLHPPPPPHHHAAHAGMDMAHIVCGG 351
MQDQLVCHGCRN LMYPRGA+NVRCALC+ +NMVP PPPPPH DMAHI+CGG
Sbjct: 1 MQDQLVCHGCRNLLMYPRGASNVRCALCNTINMVP--PPPPPH--------DMAHIICGG 50
Query: 352 CRTMLMYTRGATSVRCSCCQTVNLVP------GPPPSNQVAHINCGNCRTTLMYPYGASS 513
CRTMLMYTRGA+SVRCSCCQT NLVP PS+QVA INCG+CRTTLMYPYGASS
Sbjct: 51 CRTMLMYTRGASSVRCSCCQTTNLVPAHSNQVAHAPSSQVAQINCGHCRTTLMYPYGASS 110
Query: 514 VKCAICQFVTNVNVSNGRVPLASNRPNGTASPGTMPSTSTQSTPPSQTQTVVVENPMSVN 693
VKCA+CQFVTNVN+SNGRVPL +NRPNGTA P PSTST STPPSQTQTVVVENPMSV+
Sbjct: 111 VKCAVCQFVTNVNMSNGRVPLPTNRPNGTACP---PSTST-STPPSQTQTVVVENPMSVD 166
Query: 694 ESGKLVSNVVVGVTT 738
ESGKLVSNVVVGVTT
Sbjct: 167 ESGKLVSNVVVGVTT 181
>TAIR9_protein||AT4G20380.4 | Symbols: LSD1 | zinc finger protein (LSD1) |
chr4:11005027-11006438 FORWARD
Length = 185
Score = 309 bits (789), Expect = 2e-084
Identities = 155/195 (79%), Positives = 166/195 (85%), Gaps = 20/195 (10%)
Frame = +1
Query: 172 MQDQLVCHGCRNTLMYPRGATNVRCALCHIVNMVPLHPPPPPHHHAAHAGMDMAHIVCGG 351
MQDQLVCHGCRN LMYPRGA+NVRCALC+ +NMVP PPPPPH DMAHI+CGG
Sbjct: 1 MQDQLVCHGCRNLLMYPRGASNVRCALCNTINMVP--PPPPPH--------DMAHIICGG 50
Query: 352 CRTMLMYTRGATSVRCSCCQTVNLVP------GPPPSNQVAHINCGNCRTTLMYPYGASS 513
CRTMLMYTRGA+SVRCSCCQT NLVP PS+QVA INCG+CRTTLMYPYGASS
Sbjct: 51 CRTMLMYTRGASSVRCSCCQTTNLVPAHSNQVAHAPSSQVAQINCGHCRTTLMYPYGASS 110
Query: 514 VKCAICQFVTNVNVSNGRVPLASNRPNGTASPGTMPSTSTQSTPPSQTQTVVVENPMSVN 693
VKCA+CQFVTNVN+SNGRVPL +NRPNGTA P PSTST STPPSQTQTVVVENPMSV+
Sbjct: 111 VKCAVCQFVTNVNMSNGRVPLPTNRPNGTACP---PSTST-STPPSQTQTVVVENPMSVD 166
Query: 694 ESGKLVSNVVVGVTT 738
ESGKLVSNVVVGVTT
Sbjct: 167 ESGKLVSNVVVGVTT 181
>TAIR9_protein||AT4G20380.5 | Symbols: LSD1 | zinc finger protein (LSD1) |
chr4:11005027-11006438 FORWARD
Length = 185
Score = 309 bits (789), Expect = 2e-084
Identities = 155/195 (79%), Positives = 166/195 (85%), Gaps = 20/195 (10%)
Frame = +1
Query: 172 MQDQLVCHGCRNTLMYPRGATNVRCALCHIVNMVPLHPPPPPHHHAAHAGMDMAHIVCGG 351
MQDQLVCHGCRN LMYPRGA+NVRCALC+ +NMVP PPPPPH DMAHI+CGG
Sbjct: 1 MQDQLVCHGCRNLLMYPRGASNVRCALCNTINMVP--PPPPPH--------DMAHIICGG 50
Query: 352 CRTMLMYTRGATSVRCSCCQTVNLVP------GPPPSNQVAHINCGNCRTTLMYPYGASS 513
CRTMLMYTRGA+SVRCSCCQT NLVP PS+QVA INCG+CRTTLMYPYGASS
Sbjct: 51 CRTMLMYTRGASSVRCSCCQTTNLVPAHSNQVAHAPSSQVAQINCGHCRTTLMYPYGASS 110
Query: 514 VKCAICQFVTNVNVSNGRVPLASNRPNGTASPGTMPSTSTQSTPPSQTQTVVVENPMSVN 693
VKCA+CQFVTNVN+SNGRVPL +NRPNGTA P PSTST STPPSQTQTVVVENPMSV+
Sbjct: 111 VKCAVCQFVTNVNMSNGRVPLPTNRPNGTACP---PSTST-STPPSQTQTVVVENPMSVD 166
Query: 694 ESGKLVSNVVVGVTT 738
ESGKLVSNVVVGVTT
Sbjct: 167 ESGKLVSNVVVGVTT 181
>TAIR9_protein||AT4G20380.6 | Symbols: LSD1 | zinc finger protein (LSD1) |
chr4:11005027-11006438 FORWARD
Length = 185
Score = 309 bits (789), Expect = 2e-084
Identities = 155/195 (79%), Positives = 166/195 (85%), Gaps = 20/195 (10%)
Frame = +1
Query: 172 MQDQLVCHGCRNTLMYPRGATNVRCALCHIVNMVPLHPPPPPHHHAAHAGMDMAHIVCGG 351
MQDQLVCHGCRN LMYPRGA+NVRCALC+ +NMVP PPPPPH DMAHI+CGG
Sbjct: 1 MQDQLVCHGCRNLLMYPRGASNVRCALCNTINMVP--PPPPPH--------DMAHIICGG 50
Query: 352 CRTMLMYTRGATSVRCSCCQTVNLVP------GPPPSNQVAHINCGNCRTTLMYPYGASS 513
CRTMLMYTRGA+SVRCSCCQT NLVP PS+QVA INCG+CRTTLMYPYGASS
Sbjct: 51 CRTMLMYTRGASSVRCSCCQTTNLVPAHSNQVAHAPSSQVAQINCGHCRTTLMYPYGASS 110
Query: 514 VKCAICQFVTNVNVSNGRVPLASNRPNGTASPGTMPSTSTQSTPPSQTQTVVVENPMSVN 693
VKCA+CQFVTNVN+SNGRVPL +NRPNGTA P PSTST STPPSQTQTVVVENPMSV+
Sbjct: 111 VKCAVCQFVTNVNMSNGRVPLPTNRPNGTACP---PSTST-STPPSQTQTVVVENPMSVD 166
Query: 694 ESGKLVSNVVVGVTT 738
ESGKLVSNVVVGVTT
Sbjct: 167 ESGKLVSNVVVGVTT 181
>TAIR9_protein||AT4G20380.8 | Symbols: | zinc finger protein (LSD1) |
chr4:11005027-11006438 FORWARD
Length = 211
Score = 172 bits (435), Expect = 3e-043
Identities = 87/100 (87%), Positives = 93/100 (93%), Gaps = 4/100 (4%)
Frame = +1
Query: 439 PSNQVAHINCGNCRTTLMYPYGASSVKCAICQFVTNVNVSNGRVPLASNRPNGTASPGTM 618
PS+QVA INCG+CRTTLMYPYGASSVKCA+CQFVTNVN+SNGRVPL +NRPNGTA P
Sbjct: 112 PSSQVAQINCGHCRTTLMYPYGASSVKCAVCQFVTNVNMSNGRVPLPTNRPNGTACP--- 168
Query: 619 PSTSTQSTPPSQTQTVVVENPMSVNESGKLVSNVVVGVTT 738
PSTST STPPSQTQTVVVENPMSV+ESGKLVSNVVVGVTT
Sbjct: 169 PSTST-STPPSQTQTVVVENPMSVDESGKLVSNVVVGVTT 207
Score = 100 bits (247), Expect = 2e-021
Identities = 41/66 (62%), Positives = 52/66 (78%)
Frame = +1
Query: 337 IVCGGCRTMLMYTRGATSVRCSCCQTVNLVPGPPPSNQVAHINCGNCRTTLMYPYGASSV 516
+VC GCR +LMY RGA++VRC+ C T+N+VP PPP + +AHI CG CRT LMY GASSV
Sbjct: 5 LVCHGCRNLLMYPRGASNVRCALCNTINMVPPPPPPHDMAHIICGGCRTMLMYTRGASSV 64
Query: 517 KCAICQ 534
+C+ CQ
Sbjct: 65 RCSCCQ 70
Score = 84 bits (207), Expect = 8e-017
Identities = 37/46 (80%), Positives = 40/46 (86%), Gaps = 2/46 (4%)
Frame = +1
Query: 172 MQDQLVCHGCRNTLMYPRGATNVRCALCHIVNMVPLHPPPPPHHHA 309
MQDQLVCHGCRN LMYPRGA+NVRCALC+ +NMVP PPPPPH A
Sbjct: 1 MQDQLVCHGCRNLLMYPRGASNVRCALCNTINMVP--PPPPPHDMA 44
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,232,229,610
Number of Sequences: 33410
Number of Extensions: 25232229610
Number of Successful Extensions: 809227561
Number of sequences better than 0.0: 0
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