BLASTX 7.6.2
Query= UN53862 /QuerySize=642
(641 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q84L30|RD23D_ARATH Putative DNA repair protein RAD23-4 OS=Ara... 294 6e-079
sp|Q40742|RAD23_ORYSJ Probable DNA repair protein RAD23 OS=Oryza... 214 4e-055
sp|Q84L32|RD23B_ARATH Putative DNA repair protein RAD23-2 OS=Ara... 190 7e-048
sp|Q84L33|RD23A_ARATH Putative DNA repair protein RAD23-1 OS=Ara... 190 9e-048
sp|Q84L31|RD23C_ARATH Putative DNA repair protein RAD23-3 OS=Ara... 138 5e-032
sp|O74803|RHP23_SCHPO UV excision repair protein rhp23 OS=Schizo... 111 7e-024
sp|P32628|RAD23_YEAST UV excision repair protein RAD23 OS=Saccha... 87 1e-016
sp|P62990|UBIQ_BOVIN Ubiquitin OS=Bos taurus GN=RPS27A PE=1 SV=1 55 3e-007
sp|Q865C5|UBIQ_CAMDR Ubiquitin OS=Camelus dromedarius PE=3 SV=2 55 3e-007
sp|P49635|UBIQ_LEITA Ubiquitin OS=Leishmania tarentolae GN=UB-EP... 54 1e-006
>sp|Q84L30|RD23D_ARATH Putative DNA repair protein RAD23-4 OS=Arabidopsis
thaliana GN=RAD23-4 PE=2 SV=2
Length = 378
Score = 294 bits (750), Expect = 6e-079
Identities = 154/190 (81%), Positives = 163/190 (85%), Gaps = 3/190 (1%)
Frame = +3
Query: 72 MKIFVKTLKGTNFEIEVNPADTISETKRRIETHQGAQYPAAQQMLIHQGKVLKDETTLEQ 251
MKIFVKTL G+NFEIEV PAD +S+ K IET +GA+YPAA+QMLIHQGKVLKDETTLE+
Sbjct: 1 MKIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAEYPAAKQMLIHQGKVLKDETTLEE 60
Query: 252 NNVVDNSFIVIMLSKAKVSSSGASTASAPAPQAQPAQTVATPQVAAPTVSVPEPTSVAAT 431
NNVV+NSFIVIMLSK K S SGASTASAPAP A QTVATPQV+APT SVP PTS AT
Sbjct: 61 NNVVENSFIVIMLSKTKASPSGASTASAPAPSATQPQTVATPQVSAPTASVPVPTSGTAT 120
Query: 432 VATPTATATAASTQTDVYGQAASNLVAGNHLESTVQQILDMGGGSWDRDTVTRALRAAFN 611
A P ATAAS QTDVYGQAASNLVAG LESTVQQILDMGGGSWDRDTV RALRAAFN
Sbjct: 121 AAAP---ATAASVQTDVYGQAASNLVAGTTLESTVQQILDMGGGSWDRDTVVRALRAAFN 177
Query: 612 NPERAVEYLY 641
NPERAVEYLY
Sbjct: 178 NPERAVEYLY 187
>sp|Q40742|RAD23_ORYSJ Probable DNA repair protein RAD23 OS=Oryza sativa subsp.
japonica GN=RAD23 PE=1 SV=2
Length = 392
Score = 214 bits (544), Expect = 4e-055
Identities = 119/199 (59%), Positives = 145/199 (72%), Gaps = 11/199 (5%)
Frame = +3
Query: 72 MKIFVKTLKGTNFEIEVNPADTISETKRRIETHQGAQ-YPAAQQMLIHQGKVLKDETTLE 248
MKI VKTLKG+ F+IEV+ A +++ KR IET QG YPA QQMLIHQGKVLKD+TTL+
Sbjct: 1 MKISVKTLKGSTFQIEVDSAQKVADVKRIIETTQGQHIYPAEQQMLIHQGKVLKDDTTLD 60
Query: 249 QNNVVDNSFIVIMLSKAKVSSSGA-STASAPAPQAQPAQTVATPQVAAPTVSVPEPTSVA 425
+N V++NSF+VIML + K SSS A +T+ AP+ QA P QTV P A V T+V
Sbjct: 61 ENKVLENSFLVIMLRQGKGSSSSAPATSKAPSNQAPPTQTV--PAAPASQAPVAPATTVP 118
Query: 426 ATVATPTATATAA-------STQTDVYGQAASNLVAGNHLESTVQQILDMGGGSWDRDTV 584
TV+ PT TATA+ S++ D YGQA SNLVAG++LE+T+Q IL+MGGG WDRD V
Sbjct: 119 VTVSAPTPTATASPAPAVAVSSEADNYGQATSNLVAGSNLEATIQSILEMGGGIWDRDIV 178
Query: 585 TRALRAAFNNPERAVEYLY 641
AL AAFNNPERAVEYLY
Sbjct: 179 LHALSAAFNNPERAVEYLY 197
>sp|Q84L32|RD23B_ARATH Putative DNA repair protein RAD23-2 OS=Arabidopsis
thaliana GN=RAD23-2 PE=2 SV=2
Length = 368
Score = 190 bits (482), Expect = 7e-048
Identities = 99/191 (51%), Positives = 131/191 (68%), Gaps = 7/191 (3%)
Frame = +3
Query: 72 MKIFVKTLKGTNFEIEVNPADTISETKRRIETHQGA-QYPAAQQMLIHQGKVLKDETTLE 248
MK+ VKTLKG++FEI V P DTI K+ IE Q YP QQ+LIH GKVLKDETTL
Sbjct: 1 MKLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLV 60
Query: 249 QNNVVDNSFIVIMLSKAKVSSSGASTASAPAPQAQPAQTVATPQVAAPTVSVPEPTSVAA 428
+N V + F+V+MLSK+K +SS S+ P + T+++ +AAP+ + S+A
Sbjct: 61 ENKVTEEGFLVVMLSKSKTASSAG--PSSTQPTSTTTSTISSTTLAAPSTT----QSIAV 114
Query: 429 TVATPTATATAASTQTDVYGQAASNLVAGNHLESTVQQILDMGGGSWDRDTVTRALRAAF 608
+ T + Q+D YGQAAS LV+G+ +E VQQI++MGGGSWD++TVTRALRAA+
Sbjct: 115 PASNSTPVQEQPTAQSDTYGQAASTLVSGSSIEQMVQQIMEMGGGSWDKETVTRALRAAY 174
Query: 609 NNPERAVEYLY 641
NNPERAV+YLY
Sbjct: 175 NNPERAVDYLY 185
>sp|Q84L33|RD23A_ARATH Putative DNA repair protein RAD23-1 OS=Arabidopsis
thaliana GN=RAD23-1 PE=2 SV=3
Length = 371
Score = 190 bits (481), Expect = 9e-048
Identities = 100/192 (52%), Positives = 131/192 (68%), Gaps = 7/192 (3%)
Frame = +3
Query: 72 MKIFVKTLKGTNFEIEVNPADTISETKRRIETHQGA-QYPAAQQMLIHQGKVLKDETTLE 248
MK+ VKTLKG++FEI V P+DTI K+ IE QG YP QQ+LIH GKVLKDET+L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 249 QNNVVDNSFIVIMLSKAKVSSSGASTASAPAPQAQP-AQTVATPQVAAPTVSVPEPTSVA 425
+N V + F+V+MLSK+K S + + +QP + T ++ + AAP+ + P
Sbjct: 61 ENKVTEEGFLVVMLSKSKSGGSAGQASVQTSSVSQPVSATTSSTKPAAPSTTQSSPVP-- 118
Query: 426 ATVATPTATATAASTQTDVYGQAASNLVAGNHLESTVQQILDMGGGSWDRDTVTRALRAA 605
A+P + QTD YGQAAS LV+G+ LE VQQI++MGGGSWD++TVTRALRAA
Sbjct: 119 ---ASPIPAQEQPAAQTDTYGQAASTLVSGSSLEQMVQQIMEMGGGSWDKETVTRALRAA 175
Query: 606 FNNPERAVEYLY 641
+NNPERAV+YLY
Sbjct: 176 YNNPERAVDYLY 187
>sp|Q84L31|RD23C_ARATH Putative DNA repair protein RAD23-3 OS=Arabidopsis
thaliana GN=RAD23-3 PE=2 SV=2
Length = 419
Score = 138 bits (345), Expect = 5e-032
Identities = 77/137 (56%), Positives = 98/137 (71%), Gaps = 6/137 (4%)
Frame = +3
Query: 72 MKIFVKTLKGTNFEIEVNPADTISETKRRIETHQGAQ-YPAAQQMLIHQGKVLKDETTLE 248
MKIFVKTLKGT+FEIEV P D++ + K+ IE+ QGA YPAA+QMLIHQGKVLKDETT+E
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 249 QNNVVDNSFIVIMLSKAKVSSSGASTASAPAPQAQPAQTVATPQVAAPTVSVPEPTSVAA 428
+N V +NSFIVIM++K+K +S+ AS+ASA QA+ P + P++S P SV+A
Sbjct: 61 ENKVAENSFIVIMMNKSKPASAAASSASAGTSQAKS----IPPSTSQPSISPQTPASVSA 116
Query: 429 TVA-TPTATATAASTQT 476
VA PT A T T
Sbjct: 117 PVAPAPTRPPPPAPTPT 133
Score = 125 bits (312), Expect = 3e-028
Identities = 62/102 (60%), Positives = 72/102 (70%), Gaps = 3/102 (2%)
Frame = +3
Query: 336 PAPQAQPAQTVATPQVAAPTVSVPEPTSVAATVATPTATATAASTQTDVYGQAASNLVAG 515
PAP PA AT V P +PEP + +TP + +Q DVYGQAASNL AG
Sbjct: 128 PAPTPTPAPVAATETVTTP---IPEPVPATISSSTPAPDSAPVGSQGDVYGQAASNLAAG 184
Query: 516 NHLESTVQQILDMGGGSWDRDTVTRALRAAFNNPERAVEYLY 641
++LEST+QQILDMGGG+WDR+TV ALRAAFNNPERAVEYLY
Sbjct: 185 SNLESTIQQILDMGGGTWDRETVVLALRAAFNNPERAVEYLY 226
>sp|O74803|RHP23_SCHPO UV excision repair protein rhp23 OS=Schizosaccharomyces
pombe GN=rhp23 PE=1 SV=1
Length = 368
Score = 111 bits (275), Expect = 7e-024
Identities = 72/185 (38%), Positives = 108/185 (58%), Gaps = 13/185 (7%)
Frame = +3
Query: 93 LKGTNFEIEVNPADT-ISETKRRIETHQGAQYPAAQQMLIHQGKVLKDETTLEQNNVVDN 269
L+ F I ADT ISE K +I+T Q Y +Q LI+ G++L D+ T+ + N+ +
Sbjct: 8 LQQQKFVISDVSADTKISELKEKIQTQQ--NYEVERQKLIYSGRILADDKTVGEYNIKEQ 65
Query: 270 SFIVIMLSKAKVSSSGASTASAPAPQAQPAQTVATPQVAAPTVSVPEPTSVAATV--ATP 443
FIV M+S+ K S+S +A++PAP P +V +V AP+ +V E TS TV A P
Sbjct: 66 DFIVCMVSRPKTSTSTPKSAASPAP--NPPASVPEKKVEAPSSTVAESTSTTQTVAAAAP 123
Query: 444 TATATAASTQTDVYGQAASNLVAGNHLESTVQQILDMGGGSWDRDTVTRALRAAFNNPER 623
+ T A+++ + A+ L G V+ +++MG ++R V RA+RAAFNNP+R
Sbjct: 124 SNPDTTATSEAPI---DANTLAVGAQRNVAVENMVEMG---YERSEVERAMRAAFNNPDR 177
Query: 624 AVEYL 638
AVEYL
Sbjct: 178 AVEYL 182
>sp|P32628|RAD23_YEAST UV excision repair protein RAD23 OS=Saccharomyces
cerevisiae GN=RAD23 PE=1 SV=1
Length = 398
Score = 87 bits (213), Expect = 1e-016
Identities = 57/182 (31%), Positives = 94/182 (51%), Gaps = 21/182 (11%)
Frame = +3
Query: 114 IEVNPADTISETKRRIETHQGAQYPAAQQMLIHQGKVLKDETTLEQNNVVDNSFIVIMLS 293
+++ P++TI ETK ++ Q +Q LI+ GKVL+D T+ + + D +V M+S
Sbjct: 16 LDLEPSNTILETKTKLA--QSISCEESQIKLIYSGKVLQDSKTVSECGLKDGDQVVFMVS 73
Query: 294 KAKVSSS-------GASTASAPAPQAQPAQTVATPQVAAPTVSVPEPTSVAATVATPTAT 452
+ K + + +A+ P + + +T AAP + PE + P
Sbjct: 74 QKKSTKTKVTEPPIAPESATTPGRENSTEASPSTDASAAPAATAPEGSQ-------PQEE 126
Query: 453 ATAASTQTDVYGQAASNLVAGNHLESTVQQILDMGGGSWDRDTVTRALRAAFNNPERAVE 632
TA + +T+ + V G T+++I++MG + R+ V RALRAAFNNP+RAVE
Sbjct: 127 QTATTERTE--SASTPGFVVGTERNETIERIMEMG---YQREEVERALRAAFNNPDRAVE 181
Query: 633 YL 638
YL
Sbjct: 182 YL 183
>sp|P62990|UBIQ_BOVIN Ubiquitin OS=Bos taurus GN=RPS27A PE=1 SV=1
Length = 76
Score = 55 bits (132), Expect = 3e-007
Identities = 31/73 (42%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Frame = +3
Query: 72 MKIFVKTLKGTNFEIEVNPADTISETKRRIETHQGAQYPAAQQMLIHQGKVLKDETTLEQ 251
M+IFVKTL G +EV P+DTI K +I+ +G P QQ LI GK L+D TL
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 58
Query: 252 NNVVDNSFIVIML 290
N+ S + ++L
Sbjct: 59 YNIQKESTLHLVL 71
>sp|Q865C5|UBIQ_CAMDR Ubiquitin OS=Camelus dromedarius PE=3 SV=2
Length = 76
Score = 55 bits (132), Expect = 3e-007
Identities = 31/73 (42%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Frame = +3
Query: 72 MKIFVKTLKGTNFEIEVNPADTISETKRRIETHQGAQYPAAQQMLIHQGKVLKDETTLEQ 251
M+IFVKTL G +EV P+DTI K +I+ +G P QQ LI GK L+D TL
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 58
Query: 252 NNVVDNSFIVIML 290
N+ S + ++L
Sbjct: 59 YNIQKESTLHLVL 71
>sp|P49635|UBIQ_LEITA Ubiquitin OS=Leishmania tarentolae GN=UB-EP52 PE=3 SV=1
Length = 76
Score = 54 bits (127), Expect = 1e-006
Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Frame = +3
Query: 72 MKIFVKTLKGTNFEIEVNPADTISETKRRIETHQGAQYPAAQQMLIHQGKVLKDETTLEQ 251
M+IFVKTL GT +EV P+DTI K +I+ +G P QQ LI K L++ TL
Sbjct: 1 MQIFVKTLTGTTIALEVEPSDTIENVKAKIQDKEG--IPPDQQRLIFADKQLEEGRTLSD 58
Query: 252 NNVVDNSFIVIML 290
N+ S + ++L
Sbjct: 59 YNIQKESTLHLVL 71
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 197,035,034,504
Number of Sequences: 518415
Number of Extensions: 197035034504
Number of Successful Extensions: 1188428614
Number of sequences better than 0.0: 0
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