BLASTX 7.6.2
Query= UN54010 /QuerySize=471
(470 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G07810.1 | Symbols: | heterogeneous nuclear r... 221 1e-058
TAIR9_protein||AT3G07810.2 | Symbols: | heterogeneous nuclear r... 221 1e-058
TAIR9_protein||AT4G01985.1 | Symbols: | unknown protein | chr4:... 47 6e-006
TAIR9_protein||AT4G13340.1 | Symbols: | leucine-rich repeat fam... 46 8e-006
>TAIR9_protein||AT3G07810.1 | Symbols: | heterogeneous nuclear
ribonucleoprotein, putative / hnRNP, putative | chr3:2492875-2495052
FORWARD
Length = 495
Score = 221 bits (563), Expect = 1e-058
Identities = 120/164 (73%), Positives = 125/164 (76%), Gaps = 13/164 (7%)
Frame = +3
Query: 3 SFFSSNLWGNNGGRNYNNNATNSNMGG--GGSTSGNNTLNGPFGSSGVVNWGAP-GGNNG 173
S + NLWGNNGG NYNNN TNSN GGS+SGNNTL+GPFG+SG VNWGAP GGNN
Sbjct: 312 SSVTRNLWGNNGGLNYNNNNTNSNSNTYMGGSSSGNNTLSGPFGNSG-VNWGAPGGGNNA 370
Query: 174 VSNENVKFGYGGNGESGFGLG-GVRNIGPPSKAAAAPSSSFSS----NNAGYEAGGLAEF 338
VSNENVKFGYGGNGESGFGLG G P AAPSSSFSS NN GY+ GLAEF
Sbjct: 371 VSNENVKFGYGGNGESGFGLGTGGYAARNPGANKAAPSSSFSSASATNNTGYDTAGLAEF 430
Query: 339 YGNGAVYSDPTWRSSAPETEGPASFSYGIVGGGGGGGPSSDVSA 470
YGNGAVYSDPTWRS PETEGPA FSYGI GGG PSSDVSA
Sbjct: 431 YGNGAVYSDPTWRSPTPETEGPAPFSYGI----GGGVPSSDVSA 470
>TAIR9_protein||AT3G07810.2 | Symbols: | heterogeneous nuclear
ribonucleoprotein, putative / hnRNP, putative | chr3:2492875-2495102
FORWARD
Length = 496
Score = 221 bits (563), Expect = 1e-058
Identities = 120/164 (73%), Positives = 125/164 (76%), Gaps = 13/164 (7%)
Frame = +3
Query: 3 SFFSSNLWGNNGGRNYNNNATNSNMGG--GGSTSGNNTLNGPFGSSGVVNWGAP-GGNNG 173
S + NLWGNNGG NYNNN TNSN GGS+SGNNTL+GPFG+SG VNWGAP GGNN
Sbjct: 312 SSVTRNLWGNNGGLNYNNNNTNSNSNTYMGGSSSGNNTLSGPFGNSG-VNWGAPGGGNNA 370
Query: 174 VSNENVKFGYGGNGESGFGLG-GVRNIGPPSKAAAAPSSSFSS----NNAGYEAGGLAEF 338
VSNENVKFGYGGNGESGFGLG G P AAPSSSFSS NN GY+ GLAEF
Sbjct: 371 VSNENVKFGYGGNGESGFGLGTGGYAARNPGANKAAPSSSFSSASATNNTGYDTAGLAEF 430
Query: 339 YGNGAVYSDPTWRSSAPETEGPASFSYGIVGGGGGGGPSSDVSA 470
YGNGAVYSDPTWRS PETEGPA FSYGI GGG PSSDVSA
Sbjct: 431 YGNGAVYSDPTWRSPTPETEGPAPFSYGI----GGGVPSSDVSA 470
>TAIR9_protein||AT4G01985.1 | Symbols: | unknown protein | chr4:866387-868126
REVERSE
Length = 580
Score = 47 bits (109), Expect = 6e-006
Identities = 38/124 (30%), Positives = 49/124 (39%), Gaps = 5/124 (4%)
Frame = +3
Query: 78 GGGGSTSGNNTLNGPFGSSGVVNWGAPGGNNGVSNENVKFGYGGNGESGFGLGGVRNIGP 257
GGGGS G G G+SG + GA GG +G ++ G GG G +G +G +G
Sbjct: 373 GGGGSVGGGG--RGSGGASGGASGGASGGASGGASGGASGGVGGAGGAGGSVGAGGGVG- 429
Query: 258 PSKAAAAPSSSFSSNNAGYEAGGLAEFYGNGAVYSDPTWRSSAPETEGPASFSYGIVGGG 437
G GG G G+V A G + + G VG G
Sbjct: 430 --GGVGGGVGGGVGGAVGGAVGGAVGGGGGGSVGGGGRGSGGAGGGTGGSVGAGGGVGVG 487
Query: 438 GGGG 449
GGGG
Sbjct: 488 GGGG 491
>TAIR9_protein||AT4G13340.1 | Symbols: | leucine-rich repeat family protein /
extensin family protein | chr4:7758610-7760892 FORWARD
Length = 761
Score = 46 bits (108), Expect = 8e-006
Identities = 38/129 (29%), Positives = 50/129 (38%), Gaps = 7/129 (5%)
Frame = -2
Query: 448 PPPPPPPTIP*LKEAGPSVSGADDLHVGSL*TAPFP*NSASPPAS*PALLEENEDDGAAA 269
PPPPPPP P + P V S P P PP P
Sbjct: 468 PPPPPPPPPPPVYSPPPPSPPPPPPPVYS--PPPPPPPPPPPPVYSPPPPPVYSSPPPPP 525
Query: 268 ALLGGPMFLT-PPNPKPDSP----FPP*PNFTFSLLTPLFPPGAPQFTTPELPNGPLSVL 104
+ P++ T PP P P SP F P P + +P P +P +P P+ P +
Sbjct: 526 SPAPTPVYCTRPPPPPPHSPPPPQFSPPPPEPYYYSSPPPPHSSPPPHSPPPPHSPPPPI 585
Query: 103 FPLVDPPPP 77
+P + PPPP
Sbjct: 586 YPYLSPPPP 594
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,275,602,650
Number of Sequences: 33410
Number of Extensions: 25275602650
Number of Successful Extensions: 809240611
Number of sequences better than 0.0: 0
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