BLASTX 7.6.2
Query= UN54053 /QuerySize=801
(800 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G23800.1 | Symbols: | high mobility group (HM... 384 3e-107
TAIR9_protein||AT4G11080.1 | Symbols: | high mobility group (HM... 333 9e-092
TAIR9_protein||AT3G28730.1 | Symbols: ATHMG, SSRP1, NFD | ATHMG ... 72 3e-013
TAIR9_protein||AT5G23420.1 | Symbols: HMGB6 | HMGB6; transcripti... 52 4e-007
TAIR9_protein||AT1G62760.1 | Symbols: | invertase/pectin methyl... 50 1e-006
>TAIR9_protein||AT4G23800.1 | Symbols: | high mobility group (HMG1/2) family
protein | chr4:12390228-12392516 FORWARD
Length = 457
Score = 384 bits (986), Expect = 3e-107
Identities = 198/241 (82%), Positives = 217/241 (90%), Gaps = 7/241 (2%)
Frame = +2
Query: 80 MATTASPAPTKKSRNSRKALKQKNEIVTADTPSPPSPVSVAKGKGKKSFEKDLLEMQAML 259
MAT A PAPTKK RNSRKALKQKNE+V +PPSPVSV KGK KSFE+DL+EMQ ML
Sbjct: 1 MATNADPAPTKKPRNSRKALKQKNELV----ETPPSPVSV-KGKSAKSFEQDLMEMQTML 55
Query: 260 EKMTIEKDKTEELLKEKEEILRKKEEELVTRDAEQERLKTELKKLQKMKEFKPNMTFACG 439
EKM IEKDKTEELLKEK+EILRKKEEEL TRDAEQE+LK ELKKLQKMKEFKPNMTFACG
Sbjct: 56 EKMKIEKDKTEELLKEKDEILRKKEEELETRDAEQEKLKVELKKLQKMKEFKPNMTFACG 115
Query: 440 QSP-TQGEEEKVNKKKKKKDCPERKRPSSSYILWCKEQRDEIKKENPEADFKETSNILGA 616
QS TQ E+EK N KKKKKDCPE KRPSSSY+LWCK+Q E+KKENPEADFKETSNILGA
Sbjct: 116 QSSLTQAEQEKAN-KKKKKDCPETKRPSSSYVLWCKDQWTEVKKENPEADFKETSNILGA 174
Query: 617 KWKSLSAEEKKPYEERYKVEKEAYLQVVAKEKREREAMKLLDDEQKQKTAMDLLNQYLQF 796
KWKSLSAE+KKPYEERY+VEKEAYLQV+AKEKRE+EAMKLL+D+QKQ+TAM+LL+QYL F
Sbjct: 175 KWKSLSAEDKKPYEERYQVEKEAYLQVIAKEKREKEAMKLLEDDQKQRTAMELLDQYLNF 234
Query: 797 V 799
V
Sbjct: 235 V 235
>TAIR9_protein||AT4G11080.1 | Symbols: | high mobility group (HMG1/2) family
protein | chr4:6760898-6763272 REVERSE
Length = 447
Score = 333 bits (853), Expect = 9e-092
Identities = 180/241 (74%), Positives = 200/241 (82%), Gaps = 16/241 (6%)
Frame = +2
Query: 80 MATTAS-PAPTKKSRNSRKALKQKNEIVTADTPSPPSPVSVAKGKGKKSFEKDLLEMQAM 256
M+T +S PA KKSRNSRKALKQKNEIV + SPVS KGK KSFEKDL+EMQAM
Sbjct: 1 MSTVSSDPAHAKKSRNSRKALKQKNEIVES------SPVS-DKGKETKSFEKDLMEMQAM 53
Query: 257 LEKMTIEKDKTEELLKEKEEILRKKEEELVTRDAEQERLKTELKKLQKMKEFKPNMTFAC 436
LEKM IEK+KTE+LLKEK+EILRKKE EQE+LKTELKKLQKMKEFKPNMTFA
Sbjct: 54 LEKMKIEKEKTEDLLKEKDEILRKKE-------VEQEKLKTELKKLQKMKEFKPNMTFAF 106
Query: 437 GQSPTQGEEEKVNKKKKKKDCPERKRPSSSYILWCKEQRDEIKKENPEADFKETSNILGA 616
QS Q EEEK KKKKKDC E KRPS+ YILWCK+ +E+KK+NPEADFKETSNILGA
Sbjct: 107 SQSLAQTEEEK-KGKKKKKDCAETKRPSTPYILWCKDNWNEVKKQNPEADFKETSNILGA 165
Query: 617 KWKSLSAEEKKPYEERYKVEKEAYLQVVAKEKREREAMKLLDDEQKQKTAMDLLNQYLQF 796
KWK +SAEEKKPYEE+Y+ +KEAYLQV+ KEKREREAMKLLDDEQKQKTAM+LL+QYL F
Sbjct: 166 KWKGISAEEKKPYEEKYQADKEAYLQVITKEKREREAMKLLDDEQKQKTAMELLDQYLHF 225
Query: 797 V 799
V
Sbjct: 226 V 226
>TAIR9_protein||AT3G28730.1 | Symbols: ATHMG, SSRP1, NFD | ATHMG (ARABIDOPSIS
THALIANA HIGH MOBILITY GROUP); transcription factor |
chr3:10784954-10788498 FORWARD
Length = 647
Score = 72 bits (176), Expect = 3e-013
Identities = 42/117 (35%), Positives = 65/117 (55%), Gaps = 6/117 (5%)
Frame = +2
Query: 380 ELKKLQKMKEFKPNMTFACGQSP---TQGEEE---KVNKKKKKKDCPERKRPSSSYILWC 541
E+K+ KE K + + G P T +E K K KKKKD KR S ++ +
Sbjct: 514 EIKEKSIKKEPKKEASSSKGLPPKRKTVAADEGSSKRKKPKKKKDPNAPKRAMSGFMFFS 573
Query: 542 KEQRDEIKKENPEADFKETSNILGAKWKSLSAEEKKPYEERYKVEKEAYLQVVAKEK 712
+ +RD IKKE+P F E +LG KW+ +SA++K+PYE + +V+K+ Y ++ K
Sbjct: 574 QMERDNIKKEHPGIAFGEVGKVLGDKWRQMSADDKEPYEAKAQVDKQRYKDEISDYK 630
>TAIR9_protein||AT5G23420.1 | Symbols: HMGB6 | HMGB6; transcription factor |
chr5:7888712-7890111 REVERSE
Length = 242
Score = 52 bits (123), Expect = 4e-007
Identities = 37/139 (26%), Positives = 66/139 (47%), Gaps = 9/139 (6%)
Frame = +2
Query: 359 EQERLKTELKKLQKMKEFKPNMTFACGQSPTQGEEEKVNKKKKKKDCPER-KRPSSSYIL 535
E + ++T+ + +K E K + P +K N +KK + KRP +++ +
Sbjct: 69 EAQVVETQAEAKKKPAEKKKTTS----DGPKPKRLKKTNDEKKSSSTSNKPKRPLTAFFI 124
Query: 536 WCKEQRDEIKKENPEADFKETSNILGAKWKSLSAEEKKPYEERYKVEKEAYLQVVAKEKR 715
+ + R K E+ + K+ + I G KWKSL+ EEKK Y ++ K Y + +
Sbjct: 125 FMSDFRKTFKSEHNGSLAKDAAKIGGEKWKSLTEEEKKVYLDKAAELKAEYNKSLESNDA 184
Query: 716 EREAMKLLDDEQKQKTAMD 772
+ E +DE+KQ +D
Sbjct: 185 DEEE----EDEEKQSDDVD 199
>TAIR9_protein||AT1G62760.1 | Symbols: | invertase/pectin methylesterase
inhibitor family protein | chr1:23237574-23238512 REVERSE
Length = 313
Score = 50 bits (119), Expect = 1e-006
Identities = 41/116 (35%), Positives = 54/116 (46%), Gaps = 22/116 (18%)
Frame = -1
Query: 407 PSSSEASSAPS*ASPAQ----RLSSRAPPPSSSESPPSP*ATPPSYPSRSSSSPA----- 255
PSSS +S+ PS SP+ LS +PPP S P +P PS SSSP+
Sbjct: 41 PSSSPSSAPPSSLSPSSPPPLSLSPSSPPPPPPSSSPLSSLSPSLSPSPPSSSPSSAPPS 100
Query: 254 --SPASPADLSRTTSSPSPWRRRQATAETECPPSRSRSSASTPFCCFSISSSELEM 93
SP+SP LS + SSP P PPS S S+ +P S S++ +
Sbjct: 101 SLSPSSPPPLSLSPSSPPP-----------PPPSSSPLSSLSPSSSSSTYSNQTNL 145
Score = 48 bits (113), Expect = 6e-006
Identities = 38/95 (40%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Frame = -1
Query: 410 TPSSSEASSAPS*ASPAQRLSSRAPPPSSSESPPSP*ATPPSY--PSRSSSSPASPASPA 237
+PSSS S +P SP S APP S S S P P + PS P SSSP S SP+
Sbjct: 28 SPSSSSPSLSP---SPPSSSPSSAPPSSLSPSSPPPLSLSPSSPPPPPPSSSPLSSLSPS 84
Query: 236 DLSRTTSSPSPWRRRQATAETECPPSRSRSSASTP 132
LS + S SP ++ PP S S +S P
Sbjct: 85 -LSPSPPSSSPSSAPPSSLSPSSPPPLSLSPSSPP 118
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,319,100,669
Number of Sequences: 33410
Number of Extensions: 25319100669
Number of Successful Extensions: 809254216
Number of sequences better than 0.0: 0
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