BLASTX 7.6.2
Query= UN54174 /QuerySize=548
(547 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|1346871|sp|P49108.1|PSBR_BRACM RecName: Full=Photosystem II 1... 260 7e-068
gi|121483553|gb|ABM54168.1| PSII 10Kd peptide [Brassica juncea] 255 2e-066
gi|119720780|gb|ABL97960.1| photosystem II 10kDa polytpeptide [B... 252 3e-065
gi|28207611|gb|AAO32060.1| photosystem II 10kDa polypeptide [Bra... 248 5e-064
gi|15219268|ref|NP_178025.1| photosystem II subunit R [Arabidops... 245 4e-063
gi|193872616|gb|ACF23036.1| ST244 [Eutrema halophilum] 241 4e-062
gi|297839767|ref|XP_002887765.1| hypothetical protein ARALYDRAFT... 232 2e-059
gi|3914471|sp|Q40163.1|PSBR_SOLLC RecName: Full=Photosystem II 1... 205 3e-051
gi|131399|sp|P06183.1|PSBR_SOLTU RecName: Full=Photosystem II 10... 203 2e-050
gi|21491|emb|CAA27989.1| unnamed protein product [Solanum tubero... 202 3e-050
gi|225462227|ref|XP_002271791.1| PREDICTED: hypothetical protein... 200 1e-049
gi|118488826|gb|ABK96223.1| unknown [Populus trichocarpa x Popul... 199 2e-049
gi|3914472|sp|Q40519.1|PSBR_TOBAC RecName: Full=Photosystem II 1... 198 4e-049
gi|83776786|gb|ABC46708.1| chloroplast photosystem II 10 kDa pro... 196 1e-048
gi|224115282|ref|XP_002332206.1| hypothetical protein POPTRDRAFT... 196 1e-048
gi|1418984|emb|CAA99757.1| photosystem II 10 kD polypeptide [Sol... 196 2e-048
gi|255578166|ref|XP_002529952.1| Photosystem II 10 kDa polypepti... 191 5e-047
gi|118489740|gb|ABK96671.1| unknown [Populus trichocarpa x Popul... 190 1e-046
gi|284520974|gb|ADB93062.1| chloroplast photosystem II 10 kDa po... 190 1e-046
gi|131400|sp|P10690.1|PSBR_SPIOL RecName: Full=Photosystem II 10... 188 6e-046
>gi|1346871|sp|P49108.1|PSBR_BRACM RecName: Full=Photosystem II 10 kDa
polypeptide, chloroplastic; Flags: Precursor
Length = 141
Score = 260 bits (664), Expect = 7e-068
Identities = 134/141 (95%), Positives = 135/141 (95%), Gaps = 6/141 (4%)
Frame = +2
Query: 65 MAASVMLSSVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFG----- 229
MAASVMLSSVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFG
Sbjct: 1 MAASVMLSSVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFGVNGSM 60
Query: 230 -LRDGLDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAV 406
LRDG+DASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAV
Sbjct: 61 DLRDGVDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAV 120
Query: 407 TLAGILAGGALLVYNTSALAQ 469
TLAGILAGGALLVYNTSALAQ
Sbjct: 121 TLAGILAGGALLVYNTSALAQ 141
>gi|121483553|gb|ABM54168.1| PSII 10Kd peptide [Brassica juncea]
Length = 141
Score = 255 bits (651), Expect = 2e-066
Identities = 131/141 (92%), Positives = 134/141 (95%), Gaps = 6/141 (4%)
Frame = +2
Query: 65 MAASVMLSSVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFG----- 229
MAASVMLS VTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFG
Sbjct: 1 MAASVMLSPVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFGVNGSM 60
Query: 230 -LRDGLDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAV 406
LRDG+DASGRKGKGYGVYKFVD+YGANVDGYSPIYNE+EWSASGDVYKGGVTGLAIWAV
Sbjct: 61 DLRDGVDASGRKGKGYGVYKFVDEYGANVDGYSPIYNEEEWSASGDVYKGGVTGLAIWAV 120
Query: 407 TLAGILAGGALLVYNTSALAQ 469
TLAGILAGGALLVYNTSALAQ
Sbjct: 121 TLAGILAGGALLVYNTSALAQ 141
>gi|119720780|gb|ABL97960.1| photosystem II 10kDa polytpeptide [Brassica rapa]
Length = 140
Score = 252 bits (641), Expect = 3e-065
Identities = 131/141 (92%), Positives = 133/141 (94%), Gaps = 7/141 (4%)
Frame = +2
Query: 65 MAASVMLSSVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFG----- 229
MAAS+MLSSVTLKPAGFTVEKMS RGLPSLTRA PSSF+IVASGVKKIKTDKPFG
Sbjct: 1 MAASLMLSSVTLKPAGFTVEKMSVRGLPSLTRA-PSSFKIVASGVKKIKTDKPFGVNGSM 59
Query: 230 -LRDGLDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAV 406
LRDGLDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAV
Sbjct: 60 DLRDGLDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAV 119
Query: 407 TLAGILAGGALLVYNTSALAQ 469
TLAGILAGGALLVYNTSALAQ
Sbjct: 120 TLAGILAGGALLVYNTSALAQ 140
>gi|28207611|gb|AAO32060.1| photosystem II 10kDa polypeptide [Brassica rapa
subsp. pekinensis]
Length = 137
Score = 248 bits (631), Expect = 5e-064
Identities = 129/138 (93%), Positives = 130/138 (94%), Gaps = 7/138 (5%)
Frame = +2
Query: 74 SVMLSSVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFG------LR 235
SVMLSSVTLKPAGFTVEKMS RGLPSLTRA PSSF+IVASGVKKIKTDKPFG LR
Sbjct: 1 SVMLSSVTLKPAGFTVEKMSVRGLPSLTRA-PSSFKIVASGVKKIKTDKPFGVNGSMDLR 59
Query: 236 DGLDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAVTLA 415
DGLDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAVTLA
Sbjct: 60 DGLDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAVTLA 119
Query: 416 GILAGGALLVYNTSALAQ 469
GILAGGALLVYNTSALAQ
Sbjct: 120 GILAGGALLVYNTSALAQ 137
>gi|15219268|ref|NP_178025.1| photosystem II subunit R [Arabidopsis thaliana]
Length = 140
Score = 245 bits (623), Expect = 4e-063
Identities = 127/141 (90%), Positives = 132/141 (93%), Gaps = 7/141 (4%)
Frame = +2
Query: 65 MAASVMLSSVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFG----- 229
MAASVMLSSVTLKPAGFTVEK +ARGLPSLTRA P SF+IVASGVKKIKTDKPFG
Sbjct: 1 MAASVMLSSVTLKPAGFTVEKTAARGLPSLTRARP-SFKIVASGVKKIKTDKPFGINGSM 59
Query: 230 -LRDGLDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAV 406
LRDG+DASGRKGKGYGVYK+VDKYGANVDGYSPIYNE+EWSASGDVYKGGVTGLAIWAV
Sbjct: 60 DLRDGVDASGRKGKGYGVYKYVDKYGANVDGYSPIYNENEWSASGDVYKGGVTGLAIWAV 119
Query: 407 TLAGILAGGALLVYNTSALAQ 469
TLAGILAGGALLVYNTSALAQ
Sbjct: 120 TLAGILAGGALLVYNTSALAQ 140
>gi|193872616|gb|ACF23036.1| ST244 [Eutrema halophilum]
Length = 146
Score = 241 bits (614), Expect = 4e-062
Identities = 121/141 (85%), Positives = 126/141 (89%), Gaps = 6/141 (4%)
Frame = +2
Query: 65 MAASVMLSSVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFG----- 229
MAASVMLSSVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFG
Sbjct: 1 MAASVMLSSVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFGVNGSM 60
Query: 230 -LRDGLDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAV 406
LRDG+DASGRKGKGYGVYKFVDKYGANVDGYSPIYNE+EW+ GD YKGGVTGL WA
Sbjct: 61 DLRDGVDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEEEWAPGGDTYKGGVTGLVFWAA 120
Query: 407 TLAGILAGGALLVYNTSALAQ 469
TLAG+L GG L+VYNT ALAQ
Sbjct: 121 TLAGLLGGGPLVVYNTGALAQ 141
>gi|297839767|ref|XP_002887765.1| hypothetical protein ARALYDRAFT_477073
[Arabidopsis lyrata subsp. lyrata]
Length = 133
Score = 232 bits (591), Expect = 2e-059
Identities = 120/134 (89%), Positives = 125/134 (93%), Gaps = 7/134 (5%)
Frame = +2
Query: 65 MAASVMLSSVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFG----- 229
MAASVMLSSVTLKPAGFTVEK +ARGLPSLTRA P SF+IVASGVKKIKTDKPFG
Sbjct: 1 MAASVMLSSVTLKPAGFTVEKAAARGLPSLTRARP-SFKIVASGVKKIKTDKPFGINGSM 59
Query: 230 -LRDGLDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAV 406
LRDG+DASGRKGKGYGVYK+VDKYGANVDGYSPIYNE+EWSASGDVYKGGVTGLAIWAV
Sbjct: 60 DLRDGVDASGRKGKGYGVYKYVDKYGANVDGYSPIYNENEWSASGDVYKGGVTGLAIWAV 119
Query: 407 TLAGILAGGALLVY 448
TLAGILAGGALLVY
Sbjct: 120 TLAGILAGGALLVY 133
>gi|3914471|sp|Q40163.1|PSBR_SOLLC RecName: Full=Photosystem II 10 kDa
polypeptide, chloroplastic; Flags: Precursor
Length = 138
Score = 205 bits (520), Expect = 3e-051
Identities = 106/139 (76%), Positives = 121/139 (87%), Gaps = 8/139 (5%)
Frame = +2
Query: 71 ASVMLSSVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFG------L 232
AS ++SS++LKP FT+EK+S +GLPSLTR+S SSF++VASGVKK+KTDKP+G L
Sbjct: 2 ASTVMSSLSLKPT-FTLEKISVKGLPSLTRSS-SSFKVVASGVKKLKTDKPYGINGSMAL 59
Query: 233 RDGLDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAVTL 412
RDG+DASGRK KG GVY++VDKYGANVDGYSPIYN DEWS SGDVY GG TGLAIWAVTL
Sbjct: 60 RDGVDASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPSGDVYVGGTTGLAIWAVTL 119
Query: 413 AGILAGGALLVYNTSALAQ 469
GILAGGALLVYNTSALAQ
Sbjct: 120 LGILAGGALLVYNTSALAQ 138
>gi|131399|sp|P06183.1|PSBR_SOLTU RecName: Full=Photosystem II 10 kDa
polypeptide, chloroplastic; AltName: Full=Light-inducible
tissue-specific ST-LS1 protein; Flags: Precursor
Length = 138
Score = 203 bits (514), Expect = 2e-050
Identities = 105/139 (75%), Positives = 119/139 (85%), Gaps = 8/139 (5%)
Frame = +2
Query: 71 ASVMLSSVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFG------L 232
AS ++SS++LKP FT+EK S +GLPSL R+S SSF++VASGVKK+KTDKP+G L
Sbjct: 2 ASTVMSSLSLKPT-FTLEKTSVKGLPSLARSS-SSFKVVASGVKKLKTDKPYGINGSMAL 59
Query: 233 RDGLDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAVTL 412
RDG+DASGRK KG GVY++VDKYGANVDGYSPIYN DEWS SGDVY GG TGLAIWAVTL
Sbjct: 60 RDGVDASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPSGDVYVGGTTGLAIWAVTL 119
Query: 413 AGILAGGALLVYNTSALAQ 469
GILAGGALLVYNTSALAQ
Sbjct: 120 VGILAGGALLVYNTSALAQ 138
>gi|21491|emb|CAA27989.1| unnamed protein product [Solanum tuberosum]
Length = 138
Score = 202 bits (512), Expect = 3e-050
Identities = 105/139 (75%), Positives = 118/139 (84%), Gaps = 8/139 (5%)
Frame = +2
Query: 71 ASVMLSSVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFG------L 232
AS ++SS++LKP FT+EK S +GLPSL R+S S F++VASGVKK+KTDKP+G L
Sbjct: 2 ASTVMSSLSLKPT-FTLEKTSVKGLPSLARSS-SPFKVVASGVKKLKTDKPYGINGSMAL 59
Query: 233 RDGLDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAVTL 412
RDGLDASGRK KG GVY++VDKYGANVDGYSPIYN DEWS SGDVY GG TGLAIWAVTL
Sbjct: 60 RDGLDASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPSGDVYVGGTTGLAIWAVTL 119
Query: 413 AGILAGGALLVYNTSALAQ 469
GILAGGALLVYNTSALAQ
Sbjct: 120 VGILAGGALLVYNTSALAQ 138
>gi|225462227|ref|XP_002271791.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 139
Score = 200 bits (507), Expect = 1e-049
Identities = 106/141 (75%), Positives = 118/141 (83%), Gaps = 8/141 (5%)
Frame = +2
Query: 65 MAASVMLSSVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFG----- 229
MAASVM SS++LKP+ F+VE+ + RGLPSL R+S SSFR+ ASG KKIKTDKP+G
Sbjct: 1 MAASVM-SSLSLKPSPFSVERRAVRGLPSLARSS-SSFRVEASGGKKIKTDKPYGIGGGM 58
Query: 230 -LRDGLDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAV 406
L DGLDASGRKGKG GVY+FVDKYGANVDGYSPIY+ DEWS GDVY GG TGL IWAV
Sbjct: 59 KLSDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYSPDEWSPGGDVYVGGTTGLLIWAV 118
Query: 407 TLAGILAGGALLVYNTSALAQ 469
TLAG+L GGALLVYNTSALAQ
Sbjct: 119 TLAGLLLGGALLVYNTSALAQ 139
>gi|118488826|gb|ABK96223.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 137
Score = 199 bits (504), Expect = 2e-049
Identities = 107/141 (75%), Positives = 118/141 (83%), Gaps = 10/141 (7%)
Frame = +2
Query: 65 MAASVMLSSVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFG----- 229
MAASVM +S++LKP+ FTVEK S RGLP+L+R SF+I ASGVKKIKTD P+G
Sbjct: 1 MAASVM-ASLSLKPSPFTVEKSSVRGLPTLSR---RSFKIEASGVKKIKTDTPYGTGGGM 56
Query: 230 -LRDGLDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAV 406
LRDGLDASGRK KG GVY++VDKYGANVDGYSPIYN DEWS SGDVY GG TGL IWAV
Sbjct: 57 NLRDGLDASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPSGDVYAGGKTGLLIWAV 116
Query: 407 TLAGILAGGALLVYNTSALAQ 469
TLAGILAGGALLVY+TSALAQ
Sbjct: 117 TLAGILAGGALLVYSTSALAQ 137
>gi|3914472|sp|Q40519.1|PSBR_TOBAC RecName: Full=Photosystem II 10 kDa
polypeptide, chloroplastic; Short=PII10; Flags: Precursor
Length = 136
Score = 198 bits (502), Expect = 4e-049
Identities = 104/141 (73%), Positives = 118/141 (83%), Gaps = 11/141 (7%)
Frame = +2
Query: 65 MAASVMLSSVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFG----- 229
MA++VM +LKPA F+VEK + +GLPSL R+S SSFR+ ASGVKK+KTDKP+G
Sbjct: 1 MASTVM----SLKPAPFSVEKTAVKGLPSLARSS-SSFRVQASGVKKLKTDKPYGINGSM 55
Query: 230 -LRDGLDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAV 406
LRDG+DASGRK KG GVY+FVDKYGANVDGYSPIYN D+WS SGDVY GG TGLAIWAV
Sbjct: 56 SLRDGVDASGRKQKGKGVYQFVDKYGANVDGYSPIYNTDDWSPSGDVYVGGTTGLAIWAV 115
Query: 407 TLAGILAGGALLVYNTSALAQ 469
TL GILAGGALLV+NTSALAQ
Sbjct: 116 TLVGILAGGALLVFNTSALAQ 136
>gi|83776786|gb|ABC46708.1| chloroplast photosystem II 10 kDa protein [Arachis
hypogaea]
Length = 129
Score = 196 bits (498), Expect = 1e-048
Identities = 99/130 (76%), Positives = 112/130 (86%), Gaps = 7/130 (5%)
Frame = +2
Query: 98 LKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFG------LRDGLDASGR 259
LKPA FT E+ S RG+PSL+RAS SSF++VASG KKIKTDKP+G LRDGLDASGR
Sbjct: 1 LKPAPFTAERSSVRGIPSLSRAS-SSFKVVASGGKKIKTDKPYGINGGMNLRDGLDASGR 59
Query: 260 KGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAVTLAGILAGGAL 439
KGKG GVY+FVDKYGANVDGYSPIY++ +WS +GDVY GG TGLAIWAVTL G+LAGGAL
Sbjct: 60 KGKGKGVYQFVDKYGANVDGYSPIYDQKDWSPTGDVYTGGTTGLAIWAVTLVGLLAGGAL 119
Query: 440 LVYNTSALAQ 469
LVYNTSAL+Q
Sbjct: 120 LVYNTSALSQ 129
>gi|224115282|ref|XP_002332206.1| hypothetical protein POPTRDRAFT_674736
[Populus trichocarpa]
Length = 137
Score = 196 bits (498), Expect = 1e-048
Identities = 105/141 (74%), Positives = 118/141 (83%), Gaps = 10/141 (7%)
Frame = +2
Query: 65 MAASVMLSSVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFG----- 229
MAASVM +S++LKP+ FTVEK S RGLP+L+R +F+I ASGVKKIKTD P+G
Sbjct: 1 MAASVM-ASLSLKPSPFTVEKSSVRGLPTLSR---RTFKIEASGVKKIKTDTPYGTGGGM 56
Query: 230 -LRDGLDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAV 406
LRDGLDASGRK KG GVY++VDKYGANVDGYSPIYN DEWS +GDVY GG TGL IWAV
Sbjct: 57 NLRDGLDASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPTGDVYAGGKTGLLIWAV 116
Query: 407 TLAGILAGGALLVYNTSALAQ 469
TLAGILAGGALLVY+TSALAQ
Sbjct: 117 TLAGILAGGALLVYSTSALAQ 137
>gi|1418984|emb|CAA99757.1| photosystem II 10 kD polypeptide [Solanum
lycopersicum]
Length = 130
Score = 196 bits (496), Expect = 2e-048
Identities = 101/132 (76%), Positives = 114/132 (86%), Gaps = 8/132 (6%)
Frame = +2
Query: 92 VTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFG------LRDGLDAS 253
++LKP FT+EK+S +GLPSLTR+S SSF++VA GVKK+KTDKP+G LRDG+DAS
Sbjct: 1 LSLKPT-FTLEKISVKGLPSLTRSS-SSFKVVARGVKKLKTDKPYGINGSMALRDGVDAS 58
Query: 254 GRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAVTLAGILAGG 433
GRK KG GVY++VDKYGANVDGYSPIYN DEWS SGDVY GG TGLAIWAVTL GILAGG
Sbjct: 59 GRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPSGDVYVGGTTGLAIWAVTLLGILAGG 118
Query: 434 ALLVYNTSALAQ 469
ALLVYNTSALAQ
Sbjct: 119 ALLVYNTSALAQ 130
>gi|255578166|ref|XP_002529952.1| Photosystem II 10 kDa polypeptide, chloroplast
precursor, putative [Ricinus communis]
Length = 138
Score = 191 bits (484), Expect = 5e-047
Identities = 103/142 (72%), Positives = 119/142 (83%), Gaps = 11/142 (7%)
Frame = +2
Query: 65 MAASVMLSSVTLKPAGFTVEKMSA-RGLPSLTRASPSSFRIVASGVKKIKTDKPFG---- 229
MA+SVM +SV+LKP+ FTV+K S+ RGLP+L+R +FRI ASG KKIKTDKP+G
Sbjct: 1 MASSVM-ASVSLKPSPFTVQKSSSVRGLPTLSR---RTFRIEASGGKKIKTDKPYGIGGG 56
Query: 230 --LRDGLDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWA 403
LR+G+DASGRK G GVY+FVDKYGANVDGYSPIYN DEWS +GDVY GG TGLAIWA
Sbjct: 57 MELRNGVDASGRKPTGKGVYQFVDKYGANVDGYSPIYNTDEWSPTGDVYAGGATGLAIWA 116
Query: 404 VTLAGILAGGALLVYNTSALAQ 469
+TLAG+LAGGALLVYNTSALAQ
Sbjct: 117 ITLAGLLAGGALLVYNTSALAQ 138
>gi|118489740|gb|ABK96671.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 136
Score = 190 bits (481), Expect = 1e-046
Identities = 104/141 (73%), Positives = 117/141 (82%), Gaps = 11/141 (7%)
Frame = +2
Query: 65 MAASVMLSSVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFG----- 229
MAASVM +S++LKP+ FTVEK S RGLP+L+R +F+I ASGV KIKTD P+G
Sbjct: 1 MAASVM-ASLSLKPSPFTVEKSSVRGLPTLSR---RTFKIEASGV-KIKTDTPYGTGGGM 55
Query: 230 -LRDGLDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAV 406
LRDGLDASGRK KG GVY++VDKYGANVDGYSPIYN DEWS +GDVY GG TGL IWAV
Sbjct: 56 NLRDGLDASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPTGDVYAGGKTGLLIWAV 115
Query: 407 TLAGILAGGALLVYNTSALAQ 469
TLAGILAGGALLVY+TSALAQ
Sbjct: 116 TLAGILAGGALLVYSTSALAQ 136
>gi|284520974|gb|ADB93062.1| chloroplast photosystem II 10 kDa polypeptide
[Jatropha curcas]
Length = 137
Score = 190 bits (481), Expect = 1e-046
Identities = 100/141 (70%), Positives = 114/141 (80%), Gaps = 10/141 (7%)
Frame = +2
Query: 65 MAASVMLSSVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFG----- 229
MA SVM +SV+LKP+ F+V+K S RGLP L+R +F++ A G KKIKTDKP+G
Sbjct: 1 MATSVM-ASVSLKPSPFSVQKSSVRGLPKLSR---RAFKVEAGGGKKIKTDKPYGIGGGM 56
Query: 230 -LRDGLDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAV 406
LR+GLDASGRK G GVY++VDKYGANVDGYSPIYN DEWS +GDVY GG TGLAIWAV
Sbjct: 57 NLRNGLDASGRKATGKGVYQYVDKYGANVDGYSPIYNTDEWSPTGDVYAGGTTGLAIWAV 116
Query: 407 TLAGILAGGALLVYNTSALAQ 469
TL GILAGGALLVYNTSALAQ
Sbjct: 117 TLLGILAGGALLVYNTSALAQ 137
>gi|131400|sp|P10690.1|PSBR_SPIOL RecName: Full=Photosystem II 10 kDa
polypeptide, chloroplastic; Flags: Precursor
Length = 140
Score = 188 bits (475), Expect = 6e-046
Identities = 101/142 (71%), Positives = 117/142 (82%), Gaps = 9/142 (6%)
Frame = +2
Query: 65 MAASVMLSSVTLKPAGFTVEKMSA-RGLPSLTRASPSSFRIVASGVKKIKTDKPFG---- 229
MA SVM SS++LKP+ F V+ SA +GLPSL+R+S +SF + ASGVKKIK DKP G
Sbjct: 1 MATSVM-SSLSLKPSSFGVDTKSAVKGLPSLSRSS-ASFTVRASGVKKIKVDKPLGIGGG 58
Query: 230 --LRDGLDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWA 403
LRDG+D+SGRK G GVY+FVDKYGANVDGYSPIYNE+EW+ +GDVY GG TGL IWA
Sbjct: 59 MKLRDGVDSSGRKPTGKGVYQFVDKYGANVDGYSPIYNEEEWAPTGDVYAGGTTGLLIWA 118
Query: 404 VTLAGILAGGALLVYNTSALAQ 469
VTLAG+LAGGALLVYNTSALAQ
Sbjct: 119 VTLAGLLAGGALLVYNTSALAQ 140
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,694,624,870,275
Number of Sequences: 15229318
Number of Extensions: 5694624870275
Number of Successful Extensions: 1320321217
Number of sequences better than 0.0: 0
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