BLASTX 7.6.2
Query= UN54174 /QuerySize=548
(547 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P49108|PSBR_BRACM Photosystem II 10 kDa polypeptide, chloropl... 260 4e-069
sp|P27202|PSBR_ARATH Photosystem II 10 kDa polypeptide, chloropl... 245 2e-064
sp|Q40163|PSBR_SOLLC Photosystem II 10 kDa polypeptide, chloropl... 205 2e-052
sp|P06183|PSBR_SOLTU Photosystem II 10 kDa polypeptide, chloropl... 203 9e-052
sp|Q40519|PSBR_TOBAC Photosystem II 10 kDa polypeptide, chloropl... 198 2e-050
sp|P10690|PSBR_SPIOL Photosystem II 10 kDa polypeptide, chloropl... 188 3e-047
sp|Q40070|PSBR_HORVU Photosystem II 10 kDa polypeptide, chloropl... 144 5e-034
>sp|P49108|PSBR_BRACM Photosystem II 10 kDa polypeptide, chloroplastic
OS=Brassica campestris GN=PSBR PE=2 SV=1
Length = 141
Score = 260 bits (664), Expect = 4e-069
Identities = 134/141 (95%), Positives = 135/141 (95%), Gaps = 6/141 (4%)
Frame = +2
Query: 65 MAASVMLSSVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFG----- 229
MAASVMLSSVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFG
Sbjct: 1 MAASVMLSSVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFGVNGSM 60
Query: 230 -LRDGLDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAV 406
LRDG+DASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAV
Sbjct: 61 DLRDGVDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAV 120
Query: 407 TLAGILAGGALLVYNTSALAQ 469
TLAGILAGGALLVYNTSALAQ
Sbjct: 121 TLAGILAGGALLVYNTSALAQ 141
>sp|P27202|PSBR_ARATH Photosystem II 10 kDa polypeptide, chloroplastic
OS=Arabidopsis thaliana GN=PSBR PE=1 SV=1
Length = 140
Score = 245 bits (623), Expect = 2e-064
Identities = 127/141 (90%), Positives = 132/141 (93%), Gaps = 7/141 (4%)
Frame = +2
Query: 65 MAASVMLSSVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFG----- 229
MAASVMLSSVTLKPAGFTVEK +ARGLPSLTRA P SF+IVASGVKKIKTDKPFG
Sbjct: 1 MAASVMLSSVTLKPAGFTVEKTAARGLPSLTRARP-SFKIVASGVKKIKTDKPFGINGSM 59
Query: 230 -LRDGLDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAV 406
LRDG+DASGRKGKGYGVYK+VDKYGANVDGYSPIYNE+EWSASGDVYKGGVTGLAIWAV
Sbjct: 60 DLRDGVDASGRKGKGYGVYKYVDKYGANVDGYSPIYNENEWSASGDVYKGGVTGLAIWAV 119
Query: 407 TLAGILAGGALLVYNTSALAQ 469
TLAGILAGGALLVYNTSALAQ
Sbjct: 120 TLAGILAGGALLVYNTSALAQ 140
>sp|Q40163|PSBR_SOLLC Photosystem II 10 kDa polypeptide, chloroplastic
OS=Solanum lycopersicum GN=PSBR PE=2 SV=1
Length = 138
Score = 205 bits (520), Expect = 2e-052
Identities = 106/139 (76%), Positives = 121/139 (87%), Gaps = 8/139 (5%)
Frame = +2
Query: 71 ASVMLSSVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFG------L 232
AS ++SS++LKP FT+EK+S +GLPSLTR+S SSF++VASGVKK+KTDKP+G L
Sbjct: 2 ASTVMSSLSLKPT-FTLEKISVKGLPSLTRSS-SSFKVVASGVKKLKTDKPYGINGSMAL 59
Query: 233 RDGLDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAVTL 412
RDG+DASGRK KG GVY++VDKYGANVDGYSPIYN DEWS SGDVY GG TGLAIWAVTL
Sbjct: 60 RDGVDASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPSGDVYVGGTTGLAIWAVTL 119
Query: 413 AGILAGGALLVYNTSALAQ 469
GILAGGALLVYNTSALAQ
Sbjct: 120 LGILAGGALLVYNTSALAQ 138
>sp|P06183|PSBR_SOLTU Photosystem II 10 kDa polypeptide, chloroplastic
OS=Solanum tuberosum GN=PSBR PE=2 SV=1
Length = 138
Score = 203 bits (514), Expect = 9e-052
Identities = 105/139 (75%), Positives = 119/139 (85%), Gaps = 8/139 (5%)
Frame = +2
Query: 71 ASVMLSSVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFG------L 232
AS ++SS++LKP FT+EK S +GLPSL R+S SSF++VASGVKK+KTDKP+G L
Sbjct: 2 ASTVMSSLSLKPT-FTLEKTSVKGLPSLARSS-SSFKVVASGVKKLKTDKPYGINGSMAL 59
Query: 233 RDGLDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAVTL 412
RDG+DASGRK KG GVY++VDKYGANVDGYSPIYN DEWS SGDVY GG TGLAIWAVTL
Sbjct: 60 RDGVDASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPSGDVYVGGTTGLAIWAVTL 119
Query: 413 AGILAGGALLVYNTSALAQ 469
GILAGGALLVYNTSALAQ
Sbjct: 120 VGILAGGALLVYNTSALAQ 138
>sp|Q40519|PSBR_TOBAC Photosystem II 10 kDa polypeptide, chloroplastic
OS=Nicotiana tabacum GN=PSBR PE=2 SV=1
Length = 136
Score = 198 bits (502), Expect = 2e-050
Identities = 104/141 (73%), Positives = 118/141 (83%), Gaps = 11/141 (7%)
Frame = +2
Query: 65 MAASVMLSSVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFG----- 229
MA++VM +LKPA F+VEK + +GLPSL R+S SSFR+ ASGVKK+KTDKP+G
Sbjct: 1 MASTVM----SLKPAPFSVEKTAVKGLPSLARSS-SSFRVQASGVKKLKTDKPYGINGSM 55
Query: 230 -LRDGLDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAV 406
LRDG+DASGRK KG GVY+FVDKYGANVDGYSPIYN D+WS SGDVY GG TGLAIWAV
Sbjct: 56 SLRDGVDASGRKQKGKGVYQFVDKYGANVDGYSPIYNTDDWSPSGDVYVGGTTGLAIWAV 115
Query: 407 TLAGILAGGALLVYNTSALAQ 469
TL GILAGGALLV+NTSALAQ
Sbjct: 116 TLVGILAGGALLVFNTSALAQ 136
>sp|P10690|PSBR_SPIOL Photosystem II 10 kDa polypeptide, chloroplastic
OS=Spinacia oleracea GN=PSBR PE=2 SV=1
Length = 140
Score = 188 bits (475), Expect = 3e-047
Identities = 101/142 (71%), Positives = 117/142 (82%), Gaps = 9/142 (6%)
Frame = +2
Query: 65 MAASVMLSSVTLKPAGFTVEKMSA-RGLPSLTRASPSSFRIVASGVKKIKTDKPFG---- 229
MA SVM SS++LKP+ F V+ SA +GLPSL+R+S +SF + ASGVKKIK DKP G
Sbjct: 1 MATSVM-SSLSLKPSSFGVDTKSAVKGLPSLSRSS-ASFTVRASGVKKIKVDKPLGIGGG 58
Query: 230 --LRDGLDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWA 403
LRDG+D+SGRK G GVY+FVDKYGANVDGYSPIYNE+EW+ +GDVY GG TGL IWA
Sbjct: 59 MKLRDGVDSSGRKPTGKGVYQFVDKYGANVDGYSPIYNEEEWAPTGDVYAGGTTGLLIWA 118
Query: 404 VTLAGILAGGALLVYNTSALAQ 469
VTLAG+LAGGALLVYNTSALAQ
Sbjct: 119 VTLAGLLAGGALLVYNTSALAQ 140
>sp|Q40070|PSBR_HORVU Photosystem II 10 kDa polypeptide, chloroplastic
OS=Hordeum vulgare GN=PSBR PE=3 SV=1
Length = 138
Score = 144 bits (361), Expect = 5e-034
Identities = 79/140 (56%), Positives = 99/140 (70%), Gaps = 9/140 (6%)
Frame = +2
Query: 65 MAASVMLSSVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFG----- 229
M+A VM +S+ LKP+ + + S G + ++ S IVA KK++T +P+G
Sbjct: 1 MSACVM-ASLALKPSSSPLLQRSKLG--GVRPSARPSLVIVAKKAKKVQTAQPYGPGGGV 57
Query: 230 -LRDGLDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAV 406
++G+DASGR KG GVY+F DKYGANVDGYSPIY +EWS SGDVY GG TGL +WAV
Sbjct: 58 AFKEGVDASGRVAKGKGVYQFADKYGANVDGYSPIYTPEEWSPSGDVYVGGKTGLFLWAV 117
Query: 407 TLAGILAGGALLVYNTSALA 466
TLAGIL GGALLVY+TSALA
Sbjct: 118 TLAGILLGGALLVYSTSALA 137
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 197,563,179,902
Number of Sequences: 518415
Number of Extensions: 197563179902
Number of Successful Extensions: 1194541256
Number of sequences better than 0.0: 0
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