Library    |     Search    |     Batch query    |     SNP    |     SSR  

TAIR blast output of UN54249


BLASTX 7.6.2

Query= UN54249 /QuerySize=732
        (731 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT5G52300.1 | Symbols: RD29B, LTI65 | LTI65 (LOW-...    146   2e-035
TAIR9_protein||AT5G52300.2 | Symbols: RD29B, LTI65 | LTI65 (LOW-...    139   2e-033
TAIR9_protein||AT5G52310.1 | Symbols: COR78, LTI78, RD29A, LTI14...     79   2e-015
TAIR9_protein||AT4G25580.1 | Symbols:  | stress-responsive prote...     73   1e-013

>TAIR9_protein||AT5G52300.1 | Symbols: RD29B, LTI65 | LTI65
        (LOW-TEMPERATURE-INDUCED 65) | chr5:21237205-21239404 FORWARD

          Length = 620

 Score =  146 bits (366), Expect = 2e-035
 Identities = 86/161 (53%), Positives = 114/161 (70%), Gaps = 16/161 (9%)
 Frame = +1

Query:  97 LTRPSSGHDQSEDPLKIHHPEEEEHHESRASKMFGKVKAKAKKLKNRLTKQGDEQEDHDV 276
           LTRP  GH+Q+E+P++IHHPEEEEHHE  ASK+  KVK KAKK+KN LTK G+   DHD 
Sbjct:   5 LTRP-YGHEQAEEPIRIHHPEEEEHHEKGASKVLKKVKEKAKKIKNSLTKHGN-GHDHD- 61

Query: 277 VDEEEDESDEPEPEQEPEKHVSPVNEVPNVR---TSQPQSLTHPGETSVP--EEIIPSGT 441
           V++++DE D    EQ+PE H +PV E   VR   T +P+SL+H GET+VP  EEI+P GT
Sbjct:  62 VEDDDDEYD----EQDPEVHGAPVYESSAVRGGVTGKPKSLSHAGETNVPASEEIVPPGT 117

Query: 442 R---DSSTDYTGRVEPEPLRDVSTYEHEAPSYPVRTSDVSE 555
           +     S+D+T  +EP  L+D S Y HEA + PVRT++ S+
Sbjct: 118 KVFPVVSSDHTKPIEPVSLQDTS-YGHEALADPVRTTETSD 157


 Score =  59 bits (140), Expect = 4e-009
 Identities = 34/56 (60%), Positives = 38/56 (67%), Gaps = 5/56 (8%)
 Frame = +3

Query: 558 REESRGETHQVPLKTPVSLLSSTEDETSP----GEDGLLGGQREVNTDMLKRFEDD 713
           R ESR E HQ PL TPVSLLS+TED T      GED  LGGQR+VN +  KR E+D
Sbjct: 178 RGESR-EAHQEPLNTPVSLLSATEDVTRTFAPGGEDDYLGGQRKVNVETPKRLEED 232

>TAIR9_protein||AT5G52300.2 | Symbols: RD29B, LTI65 | LTI65
        (LOW-TEMPERATURE-INDUCED 65) | chr5:21237205-21239404 FORWARD

          Length = 619

 Score =  139 bits (349), Expect = 2e-033
 Identities = 85/161 (52%), Positives = 113/161 (70%), Gaps = 17/161 (10%)
 Frame = +1

Query:  97 LTRPSSGHDQSEDPLKIHHPEEEEHHESRASKMFGKVKAKAKKLKNRLTKQGDEQEDHDV 276
           LTRP  GH+Q+E+P++IHHP EEEHHE  ASK+  KVK KAKK+KN LTK G+   DHD 
Sbjct:   5 LTRP-YGHEQAEEPIRIHHP-EEEHHEKGASKVLKKVKEKAKKIKNSLTKHGN-GHDHD- 60

Query: 277 VDEEEDESDEPEPEQEPEKHVSPVNEVPNVR---TSQPQSLTHPGETSVP--EEIIPSGT 441
           V++++DE D    EQ+PE H +PV E   VR   T +P+SL+H GET+VP  EEI+P GT
Sbjct:  61 VEDDDDEYD----EQDPEVHGAPVYESSAVRGGVTGKPKSLSHAGETNVPASEEIVPPGT 116

Query: 442 R---DSSTDYTGRVEPEPLRDVSTYEHEAPSYPVRTSDVSE 555
           +     S+D+T  +EP  L+D S Y HEA + PVRT++ S+
Sbjct: 117 KVFPVVSSDHTKPIEPVSLQDTS-YGHEALADPVRTTETSD 156


 Score =  59 bits (140), Expect = 4e-009
 Identities = 34/56 (60%), Positives = 38/56 (67%), Gaps = 5/56 (8%)
 Frame = +3

Query: 558 REESRGETHQVPLKTPVSLLSSTEDETSP----GEDGLLGGQREVNTDMLKRFEDD 713
           R ESR E HQ PL TPVSLLS+TED T      GED  LGGQR+VN +  KR E+D
Sbjct: 177 RGESR-EAHQEPLNTPVSLLSATEDVTRTFAPGGEDDYLGGQRKVNVETPKRLEED 231

>TAIR9_protein||AT5G52310.1 | Symbols: COR78, LTI78, RD29A, LTI140 | LTI78
        (LOW-TEMPERATURE-INDUCED 78) | chr5:21240929-21243326 FORWARD

          Length = 711

 Score =  79 bits (194), Expect = 2e-015
 Identities = 50/105 (47%), Positives = 64/105 (60%), Gaps = 9/105 (8%)
 Frame = +1

Query: 121 DQSED-PLKIH--HPEEEEHHESRASKMFGKVKAKAKKLKNRLTKQG---DEQEDHDVVD 282
           DQ+E+ PL  H  HPEE EHHE+ A+KMF KVKA+AKK KN LTK G   + ++DHD+V 
Sbjct:   2 DQTEEPPLNTHQQHPEEVEHHENGATKMFRKVKARAKKFKNSLTKHGQSNEHEQDHDLV- 60

Query: 283 EEEDESDEPEPEQEPEKHVSPVNEVPNVRTSQPQSLTHPGETSVP 417
           EE+D+ DE EPE      V+      NV  S  + +  PG    P
Sbjct:  61 EEDDDDDELEPEVIDAPGVTGKPRETNVPAS--EEIIPPGTKVFP 103


 Score =  49 bits (115), Expect = 3e-006
 Identities = 30/62 (48%), Positives = 37/62 (59%), Gaps = 5/62 (8%)
 Frame = +3

Query: 540 IRRVGGREESRGETHQVPLKTPVSLLSSTEDETS----PGEDGLLGGQREVNTDMLKRFE 707
           +  +  REESR ETH   L TPVSLLS TED TS     G+D  L GQR+VN +     E
Sbjct: 152 LSELSDREESR-ETHHESLNTPVSLLSGTEDVTSTFAPSGDDEYLDGQRKVNVETPITLE 210

Query: 708 DD 713
           ++
Sbjct: 211 EE 212

>TAIR9_protein||AT4G25580.1 | Symbols:  | stress-responsive protein-related |
        chr4:13056320-13058657 FORWARD

          Length = 627

 Score =  73 bits (178), Expect = 1e-013
 Identities = 35/78 (44%), Positives = 49/78 (62%), Gaps = 4/78 (5%)
 Frame = +1

Query: 115 GHDQSEDPLKIHHPEEEEHHESRASKMFGKVKAKAKKLKNRLTKQGDEQE----DHDVVD 282
           GH Q+++P++IHHPEEE HHE   SK+  KVK KAKK+KN LTK G   E    +H   D
Sbjct:  12 GHHQAQEPIRIHHPEEEGHHEKGPSKVLKKVKEKAKKIKNVLTKHGHGHEHDRGEHIPDD 71

Query: 283 EEEDESDEPEPEQEPEKH 336
            + D+ D+ +   + + H
Sbjct:  72 HDLDQEDDEDDYNDNQLH 89

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,410,584,575
Number of Sequences: 33410
Number of Extensions: 25410584575
Number of Successful Extensions: 814813375
Number of sequences better than 0.0: 0