BLASTX 7.6.2
Query= UN54353 /QuerySize=823
(822 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G34670.1 | Symbols: | 40S ribosomal protein S... 280 1e-075
TAIR9_protein||AT3G04840.1 | Symbols: | 40S ribosomal protein S... 277 6e-075
>TAIR9_protein||AT4G34670.1 | Symbols: | 40S ribosomal protein S3A (RPS3aB) |
chr4:16548724-16550222 FORWARD
Length = 263
Score = 280 bits (714), Expect = 1e-075
Identities = 135/148 (91%), Positives = 143/148 (96%)
Frame = +3
Query: 228 SVDPFSKKDWYDIKAPSNFKIRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDH 407
+VDPFSKKDWYD+KAP +F RNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDED+
Sbjct: 20 AVDPFSKKDWYDVKAPGSFTNRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDN 79
Query: 408 SYRKIRLRAEDVQGRNVLTQFWGMDFTTDKLRSLVKKWQTLIESHVDVKTTDSYTLRLFC 587
+YRKIRLRAEDVQGRNVLTQFWGMDFTTDKLRSLVKKWQTLIE+HVDVKTTD YTLR+FC
Sbjct: 80 AYRKIRLRAEDVQGRNVLTQFWGMDFTTDKLRSLVKKWQTLIEAHVDVKTTDGYTLRMFC 139
Query: 588 IGFTKRRANQVKRTCYAQSSQIRQIRRR 671
I FTKRRANQVKRTCYAQSSQIRQIRR+
Sbjct: 140 IAFTKRRANQVKRTCYAQSSQIRQIRRK 167
Score = 97 bits (239), Expect = 1e-020
Identities = 48/52 (92%), Positives = 51/52 (98%)
Frame = +2
Query: 665 QKMSEIMVKEASSCDLKELVAKFIPESIGRDIEKATQSIYPLQNVFIRKVKI 820
+KMSEIMVKEASSCDLKELVAKFIPE+IGR+IEKATQ IYPLQNVFIRKVKI
Sbjct: 166 RKMSEIMVKEASSCDLKELVAKFIPEAIGREIEKATQGIYPLQNVFIRKVKI 217
>TAIR9_protein||AT3G04840.1 | Symbols: | 40S ribosomal protein S3A (RPS3aA) |
chr3:1329751-1331418 FORWARD
Length = 263
Score = 277 bits (708), Expect = 6e-075
Identities = 136/148 (91%), Positives = 142/148 (95%)
Frame = +3
Query: 228 SVDPFSKKDWYDIKAPSNFKIRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDH 407
+VDPFSKKDWYD+KAPS F RNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQ DED+
Sbjct: 20 AVDPFSKKDWYDVKAPSIFTHRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQGDEDN 79
Query: 408 SYRKIRLRAEDVQGRNVLTQFWGMDFTTDKLRSLVKKWQTLIESHVDVKTTDSYTLRLFC 587
+YRKIRLRAEDVQGRNVL QFWGMDFTTDKLRSLVKKWQTLIE+HVDVKTTDSYTLRLFC
Sbjct: 80 AYRKIRLRAEDVQGRNVLCQFWGMDFTTDKLRSLVKKWQTLIEAHVDVKTTDSYTLRLFC 139
Query: 588 IGFTKRRANQVKRTCYAQSSQIRQIRRR 671
I FTKRRANQVKRTCYAQSSQIRQIRR+
Sbjct: 140 IAFTKRRANQVKRTCYAQSSQIRQIRRK 167
Score = 91 bits (225), Expect = 6e-019
Identities = 44/52 (84%), Positives = 50/52 (96%)
Frame = +2
Query: 665 QKMSEIMVKEASSCDLKELVAKFIPESIGRDIEKATQSIYPLQNVFIRKVKI 820
+KM +IMV+EASSCDLK+LVAKFIPE+IGR+IEKATQ IYPLQNVFIRKVKI
Sbjct: 166 RKMRDIMVREASSCDLKDLVAKFIPEAIGREIEKATQGIYPLQNVFIRKVKI 217
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,410,584,575
Number of Sequences: 33410
Number of Extensions: 25410584575
Number of Successful Extensions: 814813375
Number of sequences better than 0.0: 0
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