BLASTX 7.6.2
Query= UN54501 /QuerySize=789
(788 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297844442|ref|XP_002890102.1| hypothetical protein ARALYDRAFT... 224 2e-056
gi|18394237|ref|NP_563974.1| peptide deformylase 1A [Arabidopsis... 220 2e-055
gi|5103837|gb|AAD39667.1|AC007591_32 Simalar to gi|4377403 Polyp... 216 4e-054
gi|317106741|dbj|BAJ53237.1| JHL06P13.18 [Jatropha curcas] 148 9e-034
gi|255553123|ref|XP_002517604.1| polypeptide deformylase, putati... 147 3e-033
gi|224054132|ref|XP_002298107.1| peptide deformylase [Populus tr... 146 4e-033
gi|78101135|pdb|1ZXZ|A Chain A, X-Ray Structure Of Peptide Defor... 128 1e-027
gi|217073027|gb|ACJ84873.1| unknown [Medicago truncatula] 127 2e-027
gi|326489213|dbj|BAK01590.1| predicted protein [Hordeum vulgare ... 90 4e-016
gi|326511637|dbj|BAJ91963.1| predicted protein [Hordeum vulgare ... 90 4e-016
gi|225442881|ref|XP_002281834.1| PREDICTED: hypothetical protein... 88 1e-015
gi|87162608|gb|ABD28403.1| Formylmethionine deformylase [Medicag... 87 3e-015
gi|17433049|sp|Q9FUZ0.1|DEF1A_SOLLC RecName: Full=Peptide deform... 86 4e-015
>gi|297844442|ref|XP_002890102.1| hypothetical protein ARALYDRAFT_334826
[Arabidopsis lyrata subsp. lyrata]
Length = 270
Score = 224 bits (569), Expect = 2e-056
Identities = 133/193 (68%), Positives = 151/193 (78%), Gaps = 8/193 (4%)
Frame = +1
Query: 13 TAMATIFRFSLGLLPVSAALTCCSIRFPVSRPAS---LNRNLYHL-SSSSSSSLKTKAGW 180
TAM T+FR SLGLLPVSAA+TC SIRFPVSRP+S LNR LY+L SSSSSSSL TKAGW
Sbjct: 9 TAMGTLFRVSLGLLPVSAAVTCRSIRFPVSRPSSSHLLNRKLYNLPSSSSSSSLSTKAGW 68
Query: 181 LLGLGDNKKKKVDIPDIVAAGDPVLHEKAREVDPEEIGSERIQKIIDDMVKVMRLAPGVW 360
LLGLG+ KKKKVD+P+IVAAGDPVLHEKAREVDPEEIGSERIQKIIDDM+KVMRLAPGV
Sbjct: 69 LLGLGE-KKKKVDLPEIVAAGDPVLHEKAREVDPEEIGSERIQKIIDDMIKVMRLAPGV- 126
Query: 361 PLLLLRLVSPLRIICSWRYKRVYQLRTKGGDFCSRQTSPFDLMVMGESRSLKASSDKKAL 540
L ++ PLRII K K + +++ FDLMVM + LK S+KKAL
Sbjct: 127 GLAAPQIGVPLRIIVLEDTKEYISYAPK-EEILAQERRHFDLMVM-VNPVLKERSNKKAL 184
Query: 541 FFEGCVSVDGFRA 579
FFEGC+SV+GFRA
Sbjct: 185 FFEGCLSVNGFRA 197
Score = 99 bits (245), Expect = 6e-019
Identities = 45/54 (83%), Positives = 49/54 (90%)
Frame = +3
Query: 627 KGNGMEVNASGWQARILQHECDHLDGYL*VDKMIPRTFRTVDNLELPLAEDCPK 788
+G +EVNASGWQARILQHECDHLDG L VDKM+PRTFRTVDNL+LPLAE CPK
Sbjct: 213 QGKRIEVNASGWQARILQHECDHLDGNLYVDKMVPRTFRTVDNLDLPLAEGCPK 266
>gi|18394237|ref|NP_563974.1| peptide deformylase 1A [Arabidopsis thaliana]
Length = 269
Score = 220 bits (559), Expect = 2e-055
Identities = 129/194 (66%), Positives = 148/194 (76%), Gaps = 7/194 (3%)
Frame = +1
Query: 7 QPTAMATIFRFSLGLLPVSAALTCCSIRFPVSRPAS---LNRNLYHLSSSSSSSLKTKAG 177
+ TAM T+FR SL LLPVSAA+TC SIRFPVSRP S LNR LY+L +SSSSSL TKAG
Sbjct: 7 EATAMETLFRVSLRLLPVSAAVTCRSIRFPVSRPGSSHLLNRKLYNLPTSSSSSLSTKAG 66
Query: 178 WLLGLGDNKKKKVDIPDIVAAGDPVLHEKAREVDPEEIGSERIQKIIDDMVKVMRLAPGV 357
WLLGLG+ KKKKVD+P+IVA+GDPVLHEKAREVDP EIGSERIQKIIDDM+KVMRLAPGV
Sbjct: 67 WLLGLGE-KKKKVDLPEIVASGDPVLHEKAREVDPGEIGSERIQKIIDDMIKVMRLAPGV 125
Query: 358 WPLLLLRLVSPLRIICSWRYKRVYQLRTKGGDFCSRQTSPFDLMVMGESRSLKASSDKKA 537
L ++ PLRII K K + +++ FDLMVM + LK S+KKA
Sbjct: 126 -GLAAPQIGVPLRIIVLEDTKEYISYAPK-EEILAQERRHFDLMVM-VNPVLKERSNKKA 182
Query: 538 LFFEGCVSVDGFRA 579
LFFEGC+SVDGFRA
Sbjct: 183 LFFEGCLSVDGFRA 196
Score = 99 bits (245), Expect = 6e-019
Identities = 45/54 (83%), Positives = 49/54 (90%)
Frame = +3
Query: 627 KGNGMEVNASGWQARILQHECDHLDGYL*VDKMIPRTFRTVDNLELPLAEDCPK 788
+G +EVNASGWQARILQHECDHLDG L VDKM+PRTFRTVDNL+LPLAE CPK
Sbjct: 212 QGKRIEVNASGWQARILQHECDHLDGNLYVDKMVPRTFRTVDNLDLPLAEGCPK 265
>gi|5103837|gb|AAD39667.1|AC007591_32 Simalar to gi|4377403 Polypeptide
Deformylase from Chlamydia pneumoniae genome gb|AE001687 [Arabidopsis
thaliana]
Length = 259
Score = 216 bits (549), Expect = 4e-054
Identities = 127/190 (66%), Positives = 145/190 (76%), Gaps = 7/190 (3%)
Frame = +1
Query: 19 MATIFRFSLGLLPVSAALTCCSIRFPVSRPAS---LNRNLYHLSSSSSSSLKTKAGWLLG 189
M T+FR SL LLPVSAA+TC SIRFPVSRP S LNR LY+L +SSSSSL TKAGWLLG
Sbjct: 1 METLFRVSLRLLPVSAAVTCRSIRFPVSRPGSSHLLNRKLYNLPTSSSSSLSTKAGWLLG 60
Query: 190 LGDNKKKKVDIPDIVAAGDPVLHEKAREVDPEEIGSERIQKIIDDMVKVMRLAPGVWPLL 369
LG+ KKKKVD+P+IVA+GDPVLHEKAREVDP EIGSERIQKIIDDM+KVMRLAPGV L
Sbjct: 61 LGE-KKKKVDLPEIVASGDPVLHEKAREVDPGEIGSERIQKIIDDMIKVMRLAPGV-GLA 118
Query: 370 LLRLVSPLRIICSWRYKRVYQLRTKGGDFCSRQTSPFDLMVMGESRSLKASSDKKALFFE 549
++ PLRII K K + +++ FDLMVM + LK S+KKALFFE
Sbjct: 119 APQIGVPLRIIVLEDTKEYISYAPK-EEILAQERRHFDLMVM-VNPVLKERSNKKALFFE 176
Query: 550 GCVSVDGFRA 579
GC+SVDGFRA
Sbjct: 177 GCLSVDGFRA 186
Score = 99 bits (245), Expect = 6e-019
Identities = 45/54 (83%), Positives = 49/54 (90%)
Frame = +3
Query: 627 KGNGMEVNASGWQARILQHECDHLDGYL*VDKMIPRTFRTVDNLELPLAEDCPK 788
+G +EVNASGWQARILQHECDHLDG L VDKM+PRTFRTVDNL+LPLAE CPK
Sbjct: 202 QGKRIEVNASGWQARILQHECDHLDGNLYVDKMVPRTFRTVDNLDLPLAEGCPK 255
>gi|317106741|dbj|BAJ53237.1| JHL06P13.18 [Jatropha curcas]
Length = 274
Score = 148 bits (373), Expect = 9e-034
Identities = 91/168 (54%), Positives = 112/168 (66%), Gaps = 10/168 (5%)
Frame = +1
Query: 88 RFPVSRPASLNRN---LYHLSSSSSSSLKTKAGWLLGLGDNKKKKVDIPDIVAAGDPVLH 258
R +S+P L+ N +H +S SSSL KAGW LGLG+ KKK PDIV AGDPVLH
Sbjct: 42 RMSISKPEFLSSNPKSTFH--NSFSSSLTAKAGWFLGLGE--KKKTSFPDIVKAGDPVLH 97
Query: 259 EKAREVDPEEIGSERIQKIIDDMVKVMRLAPGVWPLLLLRLVSPLRIICSWRYKRVYQLR 438
E AREVDPEEIGSERIQKIIDDM+K MR+APGV L ++ PLRII K +
Sbjct: 98 EPAREVDPEEIGSERIQKIIDDMIKAMRMAPGV-GLAAPQIGVPLRIIVLEDTKEYIRYA 156
Query: 439 TKGGDFCSRQTSPFDLMVMGESRSLKASSDKKALFFEGCVSVDGFRAV 582
K + ++ PFDL+V+ + L+ S++ A FFEGC+SVDGFRAV
Sbjct: 157 PK-EETKAQDRRPFDLLVILNPK-LEKKSNRTAFFFEGCLSVDGFRAV 202
Score = 93 bits (230), Expect = 3e-017
Identities = 41/52 (78%), Positives = 47/52 (90%)
Frame = +3
Query: 630 GNGMEVNASGWQARILQHECDHLDGYL*VDKMIPRTFRTVDNLELPLAEDCP 785
G ++VNASGWQARILQHECDHLDG L VDKM+PRTFRT++NL+LPLAE CP
Sbjct: 218 GQPIKVNASGWQARILQHECDHLDGTLYVDKMVPRTFRTIENLDLPLAEGCP 269
>gi|255553123|ref|XP_002517604.1| polypeptide deformylase, putative [Ricinus
communis]
Length = 266
Score = 147 bits (369), Expect = 3e-033
Identities = 96/180 (53%), Positives = 115/180 (63%), Gaps = 9/180 (5%)
Frame = +1
Query: 88 RFPVSRPASLNRNLYHLSSSS-SSSLKTKAGWLLGLGDNKKKKVDIPDIVAAGDPVLHEK 264
R P+S+P Y ++ S SSS KAGWLLGLG+N KK+ +PDIV AGDPVLHE
Sbjct: 34 RIPISKPDFRTTIPYSITRKSLSSSSIAKAGWLLGLGEN--KKMSLPDIVKAGDPVLHEP 91
Query: 265 AREVDPEEIGSERIQKIIDDMVKVMRLAPGVWPLLLLRLVSPLRIICSWRYKRVYQLRTK 444
AREVDP+EIGSERIQKIIDDMVKVMR APGV L ++ PLRII K
Sbjct: 92 AREVDPDEIGSERIQKIIDDMVKVMRRAPGV-GLAAPQIGVPLRIIVLEDTTEYIGYAPK 150
Query: 445 GGDFCSRQTSPFDLMVMGESRSLKASSDKKALFFEGCVSVDGFRAV---GGEAP*SGSDR 615
+ ++ PFDL+V+ + LK ++ ALFFEGC+SVDGFRAV E SG DR
Sbjct: 151 -EETKAQDRRPFDLLVILNPK-LKKKGNRTALFFEGCLSVDGFRAVVERSLEVEVSGLDR 208
Score = 93 bits (230), Expect = 3e-017
Identities = 42/52 (80%), Positives = 47/52 (90%)
Frame = +3
Query: 630 GNGMEVNASGWQARILQHECDHLDGYL*VDKMIPRTFRTVDNLELPLAEDCP 785
G ++V+ASGWQARILQHECDHLDG L VDKM+PRTFRTVDNL+LPLAE CP
Sbjct: 210 GQPIKVDASGWQARILQHECDHLDGTLYVDKMVPRTFRTVDNLDLPLAEGCP 261
>gi|224054132|ref|XP_002298107.1| peptide deformylase [Populus trichocarpa]
Length = 299
Score = 146 bits (367), Expect = 4e-033
Identities = 89/166 (53%), Positives = 110/166 (66%), Gaps = 6/166 (3%)
Frame = +1
Query: 88 RFPVSRPASLNRNLYHLSSSS-SSSLKTKAGWLLGLGDNKKKKVDIPDIVAAGDPVLHEK 264
R V +P +N N + + S SSS KAGWLLG+G+ KKK +PDIV AGDPVLHE
Sbjct: 67 RMLVPKPEFMNPNPHFTTRKSLSSSHTAKAGWLLGMGE--KKKTSLPDIVKAGDPVLHEP 124
Query: 265 AREVDPEEIGSERIQKIIDDMVKVMRLAPGVWPLLLLRLVSPLRIICSWRYKRVYQLRTK 444
AREVDP+EIGSERIQKIIDDMVKVMR+APGV L ++ PLRII K
Sbjct: 125 AREVDPKEIGSERIQKIIDDMVKVMRMAPGV-GLAAPQIGIPLRIIVLEDTAEYIGYAPK 183
Query: 445 GGDFCSRQTSPFDLMVMGESRSLKASSDKKALFFEGCVSVDGFRAV 582
+ ++ PFDL+V+ + LK S++ A FFEGC+SVDGFRA+
Sbjct: 184 -NETKAQDRRPFDLLVIVNPK-LKKKSNRTAFFFEGCLSVDGFRAI 227
Score = 91 bits (223), Expect = 2e-016
Identities = 40/53 (75%), Positives = 48/53 (90%)
Frame = +3
Query: 630 GNGMEVNASGWQARILQHECDHLDGYL*VDKMIPRTFRTVDNLELPLAEDCPK 788
G ++V+ASGWQARILQHECDHL+G L VDKM+PRTFRTV+NL+LPLAE CP+
Sbjct: 243 GQPIKVDASGWQARILQHECDHLEGTLYVDKMVPRTFRTVENLDLPLAEGCPE 295
>gi|78101135|pdb|1ZXZ|A Chain A, X-Ray Structure Of Peptide Deformylase From
Arabidopsis Thaliana (Atpdf1a); Crystals Grown In Peg-5000 Mme As
Precipitant
Length = 197
Score = 128 bits (320), Expect = 1e-027
Identities = 75/122 (61%), Positives = 89/122 (72%), Gaps = 3/122 (2%)
Frame = +1
Query: 214 VDIPDIVAAGDPVLHEKAREVDPEEIGSERIQKIIDDMVKVMRLAPGVWPLLLLRLVSPL 393
+D+P+IVA+GDPVLHEKAREVDP EIGSERIQKIIDDM+KVMRLAPGV L ++ PL
Sbjct: 1 MDLPEIVASGDPVLHEKAREVDPGEIGSERIQKIIDDMIKVMRLAPGV-GLAAPQIGVPL 59
Query: 394 RIICSWRYKRVYQLRTKGGDFCSRQTSPFDLMVMGESRSLKASSDKKALFFEGCVSVDGF 573
RII K K + +++ FDLMVM + LK S+KKALFFEGC+SVDGF
Sbjct: 60 RIIVLEDTKEYISYAPK-EEILAQERRHFDLMVM-VNPVLKERSNKKALFFEGCLSVDGF 117
Query: 574 RA 579
RA
Sbjct: 118 RA 119
Score = 99 bits (245), Expect = 6e-019
Identities = 45/54 (83%), Positives = 49/54 (90%)
Frame = +3
Query: 627 KGNGMEVNASGWQARILQHECDHLDGYL*VDKMIPRTFRTVDNLELPLAEDCPK 788
+G +EVNASGWQARILQHECDHLDG L VDKM+PRTFRTVDNL+LPLAE CPK
Sbjct: 135 QGKRIEVNASGWQARILQHECDHLDGNLYVDKMVPRTFRTVDNLDLPLAEGCPK 188
>gi|217073027|gb|ACJ84873.1| unknown [Medicago truncatula]
Length = 241
Score = 127 bits (319), Expect = 2e-027
Identities = 79/165 (47%), Positives = 107/165 (64%), Gaps = 6/165 (3%)
Frame = +1
Query: 94 PVSRPASLNRNLYHLSSSSSSSLKTKAGWLLG--LGDNKKKKVDIPDIVAAGDPVLHEKA 267
P S+P L L SSS +++++T+AG+ G D KKKK+D+PD V AGDPVLHE A
Sbjct: 35 PFSKPPPLTLTL-SSSSSQNATIRTRAGFFFGRTKDDKKKKKMDLPDTVKAGDPVLHEPA 93
Query: 268 REVDPEEIGSERIQKIIDDMVKVMRLAPGVWPLLLLRLVSPLRIICSWRYKRVYQLRTKG 447
+EVDP EI S+++QKIIDDM++VMR APGV L ++ RII + K
Sbjct: 94 QEVDPSEIMSDKVQKIIDDMIRVMRKAPGV-GLAAPQIGVSSRIIVLEDTEEFISYAPK- 151
Query: 448 GDFCSRQTSPFDLMVMGESRSLKASSDKKALFFEGCVSVDGFRAV 582
++ PFDL+V+ + LK++S + ALFFEGC+SVDGFRAV
Sbjct: 152 EVLKAQDRHPFDLLVILNPK-LKSTSKRTALFFEGCLSVDGFRAV 195
>gi|326489213|dbj|BAK01590.1| predicted protein [Hordeum vulgare subsp.
vulgare]
Length = 259
Score = 90 bits (221), Expect = 4e-016
Identities = 41/52 (78%), Positives = 44/52 (84%)
Frame = +3
Query: 630 GNGMEVNASGWQARILQHECDHLDGYL*VDKMIPRTFRTVDNLELPLAEDCP 785
G M+V ASGWQARILQHECDHL+G L VDKM+PRTFRTVDNL LPLA CP
Sbjct: 203 GRPMKVEASGWQARILQHECDHLEGTLYVDKMVPRTFRTVDNLNLPLATGCP 254
>gi|326511637|dbj|BAJ91963.1| predicted protein [Hordeum vulgare subsp.
vulgare]
Length = 121
Score = 90 bits (221), Expect = 4e-016
Identities = 41/52 (78%), Positives = 44/52 (84%)
Frame = +3
Query: 630 GNGMEVNASGWQARILQHECDHLDGYL*VDKMIPRTFRTVDNLELPLAEDCP 785
G M+V ASGWQARILQHECDHL+G L VDKM+PRTFRTVDNL LPLA CP
Sbjct: 65 GRPMKVEASGWQARILQHECDHLEGTLYVDKMVPRTFRTVDNLNLPLATGCP 116
>gi|225442881|ref|XP_002281834.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 277
Score = 88 bits (216), Expect = 1e-015
Identities = 39/53 (73%), Positives = 46/53 (86%)
Frame = +3
Query: 630 GNGMEVNASGWQARILQHECDHLDGYL*VDKMIPRTFRTVDNLELPLAEDCPK 788
G ++V+ASGW+ARILQHECDHLDG L VDKM+PRTFRTV N++LPLA CPK
Sbjct: 221 GKPIKVDASGWKARILQHECDHLDGTLYVDKMVPRTFRTVQNIDLPLAVGCPK 273
>gi|87162608|gb|ABD28403.1| Formylmethionine deformylase [Medicago truncatula]
Length = 257
Score = 87 bits (213), Expect = 3e-015
Identities = 38/53 (71%), Positives = 45/53 (84%)
Frame = +3
Query: 630 GNGMEVNASGWQARILQHECDHLDGYL*VDKMIPRTFRTVDNLELPLAEDCPK 788
G +++NASGWQARILQHECDHLDG L VDKM+PRTFR+ N++LPLA CPK
Sbjct: 200 GEPIKINASGWQARILQHECDHLDGTLYVDKMVPRTFRSWKNVDLPLARGCPK 252
>gi|17433049|sp|Q9FUZ0.1|DEF1A_SOLLC RecName: Full=Peptide deformylase 1A,
chloroplastic; Short=PDF 1A; AltName: Full=Polypeptide deformylase;
Flags: Precursor
Length = 277
Score = 86 bits (212), Expect = 4e-015
Identities = 40/53 (75%), Positives = 45/53 (84%)
Frame = +3
Query: 630 GNGMEVNASGWQARILQHECDHLDGYL*VDKMIPRTFRTVDNLELPLAEDCPK 788
G ++V+ASGWQARILQHE DHLDG L VDKM PRTFRTV+NL+LPLA CPK
Sbjct: 221 GKAIKVDASGWQARILQHEYDHLDGTLYVDKMAPRTFRTVENLDLPLAAGCPK 273
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,723,039,643,682
Number of Sequences: 15229318
Number of Extensions: 5723039643682
Number of Successful Extensions: 1337727833
Number of sequences better than 0.0: 0
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