BLASTX 7.6.2
Query= UN54501 /QuerySize=789
(788 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9FV53|DEF1A_ARATH Peptide deformylase 1A, chloroplastic OS=A... 216 2e-055
sp|Q9FUZ0|DEF1A_SOLLC Peptide deformylase 1A, chloroplastic OS=S... 122 2e-027
sp|B6RGY0|DEF1A_ORYSJ Peptide deformylase 1A, chloroplastic OS=O... 94 1e-018
sp|Q7NJV3|DEF1_GLOVI Peptide deformylase 1 OS=Gloeobacter violac... 59 3e-008
>sp|Q9FV53|DEF1A_ARATH Peptide deformylase 1A, chloroplastic OS=Arabidopsis
thaliana GN=PDF1A PE=1 SV=2
Length = 259
Score = 216 bits (549), Expect = 2e-055
Identities = 127/190 (66%), Positives = 145/190 (76%), Gaps = 7/190 (3%)
Frame = +1
Query: 19 MATIFRFSLGLLPVSAALTCCSIRFPVSRPAS---LNRNLYHLSSSSSSSLKTKAGWLLG 189
M T+FR SL LLPVSAA+TC SIRFPVSRP S LNR LY+L +SSSSSL TKAGWLLG
Sbjct: 1 METLFRVSLRLLPVSAAVTCRSIRFPVSRPGSSHLLNRKLYNLPTSSSSSLSTKAGWLLG 60
Query: 190 LGDNKKKKVDIPDIVAAGDPVLHEKAREVDPEEIGSERIQKIIDDMVKVMRLAPGVWPLL 369
LG+ KKKKVD+P+IVA+GDPVLHEKAREVDP EIGSERIQKIIDDM+KVMRLAPGV L
Sbjct: 61 LGE-KKKKVDLPEIVASGDPVLHEKAREVDPGEIGSERIQKIIDDMIKVMRLAPGV-GLA 118
Query: 370 LLRLVSPLRIICSWRYKRVYQLRTKGGDFCSRQTSPFDLMVMGESRSLKASSDKKALFFE 549
++ PLRII K K + +++ FDLMVM + LK S+KKALFFE
Sbjct: 119 APQIGVPLRIIVLEDTKEYISYAPK-EEILAQERRHFDLMVM-VNPVLKERSNKKALFFE 176
Query: 550 GCVSVDGFRA 579
GC+SVDGFRA
Sbjct: 177 GCLSVDGFRA 186
Score = 99 bits (245), Expect = 3e-020
Identities = 45/54 (83%), Positives = 49/54 (90%)
Frame = +3
Query: 627 KGNGMEVNASGWQARILQHECDHLDGYL*VDKMIPRTFRTVDNLELPLAEDCPK 788
+G +EVNASGWQARILQHECDHLDG L VDKM+PRTFRTVDNL+LPLAE CPK
Sbjct: 202 QGKRIEVNASGWQARILQHECDHLDGNLYVDKMVPRTFRTVDNLDLPLAEGCPK 255
>sp|Q9FUZ0|DEF1A_SOLLC Peptide deformylase 1A, chloroplastic OS=Solanum
lycopersicum GN=PDF1A PE=2 SV=1
Length = 277
Score = 122 bits (306), Expect = 2e-027
Identities = 75/149 (50%), Positives = 97/149 (65%), Gaps = 5/149 (3%)
Frame = +1
Query: 136 LSSSSSSSLKTKAGWLLGLGDNKKKKVDIPDIVAAGDPVLHEKAREVDPEEIGSERIQKI 315
+S + SS +AGW LGLG+ KKK +PDIV AGDPVLHE ++++ EEIGSERIQKI
Sbjct: 62 ISKKNYSSATARAGWFLGLGE--KKKQAMPDIVKAGDPVLHEPSQDIPLEEIGSERIQKI 119
Query: 316 IDDMVKVMRLAPGVWPLLLLRLVSPLRIICSWRYKRVYQLRTKGGDFCSRQTSPFDLMVM 495
I++MVKVMR APGV L ++ PL+II K + ++ PF L+V+
Sbjct: 120 IEEMVKVMRNAPGV-GLAAPQIGIPLKIIVLEDTNEYISYAPK-DETKAQDRRPFGLLVI 177
Query: 496 GESRSLKASSDKKALFFEGCVSVDGFRAV 582
+ LK +K ALFFEGC+SVDGFRAV
Sbjct: 178 INPK-LKKKGNKTALFFEGCLSVDGFRAV 205
Score = 86 bits (212), Expect = 2e-016
Identities = 40/53 (75%), Positives = 45/53 (84%)
Frame = +3
Query: 630 GNGMEVNASGWQARILQHECDHLDGYL*VDKMIPRTFRTVDNLELPLAEDCPK 788
G ++V+ASGWQARILQHE DHLDG L VDKM PRTFRTV+NL+LPLA CPK
Sbjct: 221 GKAIKVDASGWQARILQHEYDHLDGTLYVDKMAPRTFRTVENLDLPLAAGCPK 273
Score = 60 bits (144), Expect = 1e-008
Identities = 40/84 (47%), Positives = 49/84 (58%), Gaps = 6/84 (7%)
Frame = +2
Query: 389 P*ESFVLGDTKEYISYAPKEETFAQDRRP--LLILW*WVNPGA*KRVATRKLSSLKDV*V 562
P + VL DT EYISYAPK+ET AQDRRP LL++ +NP K+ + +
Sbjct: 143 PLKIIVLEDTNEYISYAPKDETKAQDRRPFGLLVI---INPKL-KKKGNKTALFFEGCLS 198
Query: 563 LMDSELWVERHLEVVVTGYDRQGK 634
+ VERHLEV VTG DR GK
Sbjct: 199 VDGFRAVVERHLEVEVTGLDRNGK 222
>sp|B6RGY0|DEF1A_ORYSJ Peptide deformylase 1A, chloroplastic OS=Oryza sativa
subsp. japonica GN=PDF1A PE=2 SV=1
Length = 260
Score = 94 bits (231), Expect = 1e-018
Identities = 62/142 (43%), Positives = 82/142 (57%), Gaps = 9/142 (6%)
Frame = +1
Query: 175 GWLLGL------GDNKKKKVDIPDIVAAGDPVLHEKAREVDPEEIGSERIQKIIDDMVKV 336
GWL GL G P V AGDPVLHE A++V P +I SE++Q +ID MV V
Sbjct: 50 GWLSGLLGGKGGGGAPTAMTVTPGTVKAGDPVLHEPAQDVAPGDIPSEKVQGVIDRMVAV 109
Query: 337 MRLAPGVWPLLLLRLVSPLRIICSWRYKRVYQLRTKGGDFCSRQTSPFDLMVMGESRSLK 516
MR APGV L ++ PL+II + K D ++ PFDL+V+ + LK
Sbjct: 110 MRKAPGV-GLAAPQIGVPLKIIVLEDTQEYISYAPK-KDIEAQDRRPFDLLVIINPK-LK 166
Query: 517 ASSDKKALFFEGCVSVDGFRAV 582
+S + ALFFEGC+SVDG+RA+
Sbjct: 167 TTSKRTALFFEGCLSVDGYRAL 188
Score = 82 bits (201), Expect = 4e-015
Identities = 37/52 (71%), Positives = 42/52 (80%)
Frame = +3
Query: 630 GNGMEVNASGWQARILQHECDHLDGYL*VDKMIPRTFRTVDNLELPLAEDCP 785
G ++V ASGWQARILQHECDHL+G L VD M+PRTFR VDNL+LPL CP
Sbjct: 204 GRPIKVEASGWQARILQHECDHLEGTLYVDTMVPRTFRIVDNLDLPLPVGCP 255
Score = 54 bits (128), Expect = 1e-006
Identities = 36/84 (42%), Positives = 49/84 (58%), Gaps = 6/84 (7%)
Frame = +2
Query: 389 P*ESFVLGDTKEYISYAPKEETFAQDRRP--LLILW*WVNPGA*KRVATRKLSSLKDV*V 562
P + VL DT+EYISYAPK++ AQDRRP LL++ +NP K + R +
Sbjct: 126 PLKIIVLEDTQEYISYAPKKDIEAQDRRPFDLLVI---INPKL-KTTSKRTALFFEGCLS 181
Query: 563 LMDSELWVERHLEVVVTGYDRQGK 634
+ VERHL+V V+G DR G+
Sbjct: 182 VDGYRALVERHLDVEVSGLDRNGR 205
>sp|Q7NJV3|DEF1_GLOVI Peptide deformylase 1 OS=Gloeobacter violaceus GN=def1
PE=3 SV=1
Length = 227
Score = 59 bits (141), Expect = 3e-008
Identities = 39/123 (31%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Frame = +1
Query: 226 DIVAAGDPVLHEKAREVDPEEIGSERIQKIIDDMVKVMRLAPGVWPLLLLRLVSPLRIIC 405
+IV GDPVL A+ ++ +EI SE IQ++I M + MR APGV VS ++
Sbjct: 47 EIVKTGDPVLRLTAKPLNSDEIQSEAIQQLIAAMAERMREAPGVGLAAPQVGVSVQLVVI 106
Query: 406 SWRYKRVYQLRTKGGDFCSRQTSPFDLMVMGESRSLKASSDKKALFFEGCVSVDGFRAVG 585
R + + +L R+ PF +++ + L ++ A+FFEGC+S+ G++ +
Sbjct: 107 EDRPEYIERLSGAERREREREPVPFHVLI---NPVLSVEGEESAVFFEGCLSIPGYQGLV 163
Query: 586 GEA 594
A
Sbjct: 164 ARA 166
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 198,593,781,018
Number of Sequences: 518415
Number of Extensions: 198593781018
Number of Successful Extensions: 1207178190
Number of sequences better than 0.0: 0
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