BLASTX 7.6.2
Query= UN54513 /QuerySize=636
(635 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G43630.1 | Symbols: | FUNCTIONS IN: molecular... 150 9e-037
TAIR9_protein||AT3G59640.1 | Symbols: | glycine-rich protein | ... 107 5e-024
TAIR9_protein||AT3G59640.2 | Symbols: | glycine-rich protein | ... 107 5e-024
TAIR9_protein||AT3G22800.1 | Symbols: | leucine-rich repeat fam... 50 1e-006
>TAIR9_protein||AT2G43630.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast, nucleus, chloroplast
envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is: glycine-rich
protein (TAIR:AT3G59640.2); Has 48 Blast hits to 48 proteins in 14
species: Archae - 0; Bacteria - 2; Metazoa - 10; Fungi - 0; Plants -
32; Viruses - 2; Other Eukaryotes - 2 (source: NCBI BLink). |
chr2:18096255-18097344 FORWARD
Length = 275
Score = 150 bits (377), Expect = 9e-037
Identities = 70/102 (68%), Positives = 87/102 (85%), Gaps = 1/102 (0%)
Frame = +3
Query: 216 KTLQVVLATMGFIFLYIFLINGEELFRLARDYFRYLTGRPKSNRLTRVTESWSRLLERVS 395
+TLQVVLAT+GFIFLY ++I GEEL +LARDY R+L GRPK+ RLTR +SW+ LE++S
Sbjct: 162 ETLQVVLATLGFIFLYTYIITGEELVKLARDYIRFLMGRPKTVRLTRAMDSWNGFLEKMS 221
Query: 396 PRQKVYDEYLLEKPIINTPSWYESPEKYRRVVKSYTDANEDE 521
RQ+VYDEY LEK IINTP+WY+SPEKYRRV+K+Y D+N DE
Sbjct: 222 -RQRVYDEYWLEKAIINTPTWYDSPEKYRRVIKAYVDSNSDE 262
Score = 91 bits (225), Expect = 4e-019
Identities = 47/71 (66%), Positives = 52/71 (73%), Gaps = 5/71 (7%)
Frame = +2
Query: 20 KEIEKAMGNKSVEDLLREQIQNKDYY---KGGNTPPRGGGRGGGGGSGGGNGGSQGSSGE 190
K IEKAMG KSVED+LREQIQ KD+Y GGN PPRGGG GGGGG+ G +GS GE
Sbjct: 95 KAIEKAMGKKSVEDMLREQIQKKDFYDTDSGGNMPPRGGGSGGGGGN--GEERPEGSGGE 152
Query: 191 DGGLPGIAQNS 223
DGGL GIA +
Sbjct: 153 DGGLAGIADET 163
>TAIR9_protein||AT3G59640.1 | Symbols: | glycine-rich protein |
chr3:22029101-22030300 FORWARD
Length = 247
Score = 107 bits (267), Expect = 5e-024
Identities = 53/72 (73%), Positives = 62/72 (86%), Gaps = 1/72 (1%)
Frame = +3
Query: 216 KTLQVVLATMGFIFLYIFLINGEELFRLARDYFRYLTGRPKSNRLTRVTESWSRLLERVS 395
+TLQVVLAT+GFIFLY ++INGEELFRLARDY RYL GRPKS RLTRV E WSR E++S
Sbjct: 156 ETLQVVLATLGFIFLYFYIINGEELFRLARDYIRYLIGRPKSVRLTRVMEGWSRFFEKMS 215
Query: 396 PRQKVYDEYLLE 431
R+KVY+EY L+
Sbjct: 216 -RKKVYNEYWLK 226
Score = 86 bits (210), Expect = 2e-017
Identities = 46/67 (68%), Positives = 50/67 (74%), Gaps = 4/67 (5%)
Frame = +2
Query: 2 QISSQRKEIEKAMGNKSVEDLLREQIQNKDYYKGGNTPPRGGGRGGGGGSGGGNGGSQGS 181
++SS + IEKAMG KSVED+LREQIQ KD G PPRG G GGGGG GGN GS GS
Sbjct: 88 ELSSTWEAIEKAMGKKSVEDMLREQIQKKD---TGGIPPRGRG-GGGGGRNGGNNGSGGS 143
Query: 182 SGEDGGL 202
SGEDGGL
Sbjct: 144 SGEDGGL 150
>TAIR9_protein||AT3G59640.2 | Symbols: | glycine-rich protein |
chr3:22029101-22030300 FORWARD
Length = 247
Score = 107 bits (267), Expect = 5e-024
Identities = 53/72 (73%), Positives = 62/72 (86%), Gaps = 1/72 (1%)
Frame = +3
Query: 216 KTLQVVLATMGFIFLYIFLINGEELFRLARDYFRYLTGRPKSNRLTRVTESWSRLLERVS 395
+TLQVVLAT+GFIFLY ++INGEELFRLARDY RYL GRPKS RLTRV E WSR E++S
Sbjct: 156 ETLQVVLATLGFIFLYFYIINGEELFRLARDYIRYLIGRPKSVRLTRVMEGWSRFFEKMS 215
Query: 396 PRQKVYDEYLLE 431
R+KVY+EY L+
Sbjct: 216 -RKKVYNEYWLK 226
Score = 86 bits (210), Expect = 2e-017
Identities = 46/67 (68%), Positives = 50/67 (74%), Gaps = 4/67 (5%)
Frame = +2
Query: 2 QISSQRKEIEKAMGNKSVEDLLREQIQNKDYYKGGNTPPRGGGRGGGGGSGGGNGGSQGS 181
++SS + IEKAMG KSVED+LREQIQ KD G PPRG G GGGGG GGN GS GS
Sbjct: 88 ELSSTWEAIEKAMGKKSVEDMLREQIQKKD---TGGIPPRGRG-GGGGGRNGGNNGSGGS 143
Query: 182 SGEDGGL 202
SGEDGGL
Sbjct: 144 SGEDGGL 150
>TAIR9_protein||AT3G22800.1 | Symbols: | leucine-rich repeat family protein /
extensin family protein | chr3:8063063-8064475 REVERSE
Length = 471
Score = 50 bits (117), Expect = 1e-006
Identities = 21/38 (55%), Positives = 22/38 (57%)
Frame = -3
Query: 216 CAIPGRPPSSPDEP*DPPFPPPDPPPPPLPPPRGGVLP 103
C+ P PP P P PP PPP PPPPP PPP V P
Sbjct: 374 CSPPSPPPPPPPPPPPPPPPPPPPPPPPPPPPPPYVYP 411
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,454,412,339
Number of Sequences: 33410
Number of Extensions: 25454412339
Number of Successful Extensions: 814904157
Number of sequences better than 0.0: 0
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