BLASTX 7.6.2
Query= UN54800 /QuerySize=846
(845 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G42050.1 | Symbols: | FUNCTIONS IN: molecular... 71 9e-013
TAIR9_protein||AT3G27090.1 | Symbols: | FUNCTIONS IN: molecular... 60 2e-009
>TAIR9_protein||AT5G42050.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth
stages; CONTAINS InterPro DOMAIN/s: Development and cell death domain
(InterPro:IPR013989), Kelch related (InterPro:IPR013089); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT3G27090.1); Has 5084 Blast hits to 2870 proteins in 85 species:
Archae - 0; Bacteria - 24; Metazoa - 270; Fungi - 58; Plants - 157;
Viruses - 8; Other Eukaryotes - 4567 (source: NCBI BLink). |
chr5:16815630-16816932 FORWARD
Length = 350
Score = 71 bits (172), Expect = 9e-013
Identities = 34/39 (87%), Positives = 35/39 (89%), Gaps = 1/39 (2%)
Frame = +2
Query: 707 EDDKITN-EKRFKTLPPAEALPRNETIGGYIFVCNNDTM 820
EDDK +KRFKTLPPAEALPRNETIGGYIFVCNNDTM
Sbjct: 190 EDDKNNGLDKRFKTLPPAEALPRNETIGGYIFVCNNDTM 228
Score = 67 bits (163), Expect = 1e-011
Identities = 40/60 (66%), Positives = 46/60 (76%), Gaps = 5/60 (8%)
Frame = +2
Query: 182 NNNNQQTFWQFSDQLRVLQAPH--NLSLNDSIWSTTNKRTDDRRNFDIAAASTNKTLSNI 355
NNNNQQ+FWQFSDQLRV Q P+ NLSLNDSIWS TN +RRN DI AA+T+K + I
Sbjct: 4 NNNNQQSFWQFSDQLRV-QTPNLANLSLNDSIWS-TNSVFKERRNLDI-AATTDKNNNQI 60
Score = 48 bits (112), Expect = 8e-006
Identities = 31/75 (41%), Positives = 41/75 (54%), Gaps = 16/75 (21%)
Frame = +1
Query: 340 NPIEYHNNNKASSDNNNNNNNNAASWNTWKSISN------GFGPIGSKSTTSTNV--NFN 495
N I+Y+ K +SDN N+N WN WKS + GFGP+GSKST N FN
Sbjct: 58 NQIDYY-QKKTTSDNINSN------WN-WKSSGSNNDMGLGFGPVGSKSTVDLNPIDKFN 109
Query: 496 HTDDNPWKLNNSDVN 540
++ WK N+ +VN
Sbjct: 110 SPFNDTWKFNSVNVN 124
>TAIR9_protein||AT3G27090.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Development and cell death domain (InterPro:IPR013989), Kelch related
(InterPro:IPR013089); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT5G42050.1); Has 642 Blast hits to 564 proteins
in 35 species: Archae - 0; Bacteria - 2; Metazoa - 12; Fungi - 0;
Plants - 155; Viruses - 0; Other Eukaryotes - 473 (source: NCBI BLink).
| chr3:9990020-9991407 FORWARD
Length = 297
Score = 60 bits (143), Expect = 2e-009
Identities = 25/31 (80%), Positives = 28/31 (90%)
Frame = +2
Query: 728 EKRFKTLPPAEALPRNETIGGYIFVCNNDTM 820
+KRFKTLP +E LPRNE +GGYIFVCNNDTM
Sbjct: 144 DKRFKTLPASETLPRNEVLGGYIFVCNNDTM 174
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,541,708,500
Number of Sequences: 33410
Number of Extensions: 25541708500
Number of Successful Extensions: 814969321
Number of sequences better than 0.0: 0
|