BLASTX 7.6.2
Query= UN54949 /QuerySize=535
(534 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G09012.1 | Symbols: | FUNCTIONS IN: molecular... 92 1e-019
TAIR9_protein||AT5G40080.1 | Symbols: | 60S ribosomal protein-r... 91 4e-019
TAIR9_protein||AT5G39800.1 | Symbols: | 60S ribosomal protein-r... 90 8e-019
>TAIR9_protein||AT4G09012.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; BEST Arabidopsis thaliana protein match is: 60S
ribosomal protein-related (TAIR:AT5G40080.1); Has 124 Blast hits to 124
proteins in 48 species: Archae - 0; Bacteria - 0; Metazoa - 65; Fungi -
23; Plants - 25; Viruses - 0; Other Eukaryotes - 11 (source: NCBI
BLink). | chr4:5780470-5782186 REVERSE
Length = 93
Score = 92 bits (228), Expect = 1e-019
Identities = 43/48 (89%), Positives = 45/48 (93%)
Frame = +2
Query: 116 MTLGLLSAIGRSFRRKRASSLDILSPKRAPRDFYKGKNCKPTGFHTKK 259
MTLGLL IGR+FRRKRASSLDILSPKRAPRDFYKGKNCKP GFHT+K
Sbjct: 1 MTLGLLFGIGRTFRRKRASSLDILSPKRAPRDFYKGKNCKPPGFHTRK 48
Score = 78 bits (191), Expect = 3e-015
Identities = 37/45 (82%), Positives = 40/45 (88%), Gaps = 3/45 (6%)
Frame = +3
Query: 264 GYVVQHDKLPNYVIPDLTGFKLKPYVSQCPIEVNKT---TEASK* 389
GYVVQ DKLPNYV+PDLTGFKLKPYVSQCP++VNKT TEASK*
Sbjct: 49 GYVVQPDKLPNYVVPDLTGFKLKPYVSQCPLDVNKTNESTEASK* 93
>TAIR9_protein||AT5G40080.1 | Symbols: | 60S ribosomal protein-related |
chr5:16040190-16041529 REVERSE
Length = 95
Score = 91 bits (224), Expect = 4e-019
Identities = 42/45 (93%), Positives = 43/45 (95%)
Frame = +2
Query: 125 GLLSAIGRSFRRKRASSLDILSPKRAPRDFYKGKNCKPTGFHTKK 259
GLL IGRSFRRKRASSLDILSPKRAPRDFYKGKNCKPTGFHT+K
Sbjct: 6 GLLMGIGRSFRRKRASSLDILSPKRAPRDFYKGKNCKPTGFHTRK 50
Score = 81 bits (198), Expect = 4e-016
Identities = 40/68 (58%), Positives = 47/68 (69%), Gaps = 2/68 (2%)
Frame = +3
Query: 192 PNELPEISTRAKTANLLVSTPKKGGYVVQHDKLPNYVIPDLTGFKLKPYVSQCPIEV--N 365
P P + K +KGGYVVQ DKLPNYV+PDLTGFKLKPYVSQCP++V N
Sbjct: 28 PKRAPRDFYKGKNCKPTGFHTRKGGYVVQPDKLPNYVVPDLTGFKLKPYVSQCPLQVNTN 87
Query: 366 KTTEASK* 389
++TEASK*
Sbjct: 88 ESTEASK* 95
>TAIR9_protein||AT5G39800.1 | Symbols: | 60S ribosomal protein-related |
chr5:15935580-15936936 FORWARD
Length = 95
Score = 90 bits (221), Expect = 8e-019
Identities = 41/45 (91%), Positives = 43/45 (95%)
Frame = +2
Query: 125 GLLSAIGRSFRRKRASSLDILSPKRAPRDFYKGKNCKPTGFHTKK 259
GLL IGRSFRRKR+SSLDILSPKRAPRDFYKGKNCKPTGFHT+K
Sbjct: 6 GLLMGIGRSFRRKRSSSLDILSPKRAPRDFYKGKNCKPTGFHTRK 50
Score = 82 bits (200), Expect = 2e-016
Identities = 41/68 (60%), Positives = 47/68 (69%), Gaps = 2/68 (2%)
Frame = +3
Query: 192 PNELPEISTRAKTANLLVSTPKKGGYVVQHDKLPNYVIPDLTGFKLKPYVSQCPIEV--N 365
P P + K +KGGYVVQ DKLPNYV+PDLTGFKLKPYVSQCPI+V N
Sbjct: 28 PKRAPRDFYKGKNCKPTGFHTRKGGYVVQPDKLPNYVVPDLTGFKLKPYVSQCPIQVNTN 87
Query: 366 KTTEASK* 389
++TEASK*
Sbjct: 88 ESTEASK* 95
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,583,785,165
Number of Sequences: 33410
Number of Extensions: 25583785165
Number of Successful Extensions: 814982682
Number of sequences better than 0.0: 0
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