BLASTX 7.6.2
Query= UN54974 /QuerySize=768
(767 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q09622|PUF12_CAEEL Pumilio domain-containing protein 12 OS=Ca... 95 4e-019
sp|Q07807|PUF3_YEAST mRNA-binding protein PUF3 OS=Saccharomyces ... 65 3e-010
sp|Q14671|PUM1_HUMAN Pumilio homolog 1 OS=Homo sapiens GN=PUM1 P... 55 6e-007
sp|Q5R5X3|PUM1_PONAB Pumilio homolog 1 OS=Pongo abelii GN=PUM1 P... 55 6e-007
>sp|Q09622|PUF12_CAEEL Pumilio domain-containing protein 12 OS=Caenorhabditis
elegans GN=puf-12 PE=2 SV=1
Length = 766
Score = 95 bits (235), Expect = 4e-019
Identities = 59/185 (31%), Positives = 96/185 (51%), Gaps = 5/185 (2%)
Frame = +2
Query: 215 VNLSKKERRVQAKELTEARKKRRKPHYTLEQELATLWEKMRRRDIGKEDRLKLISEALLK 394
+N+ +KER+ KEL K +RKP Q+ LWEK+R K ++ + E
Sbjct: 222 LNMPRKERKAFLKEL----KLKRKPEGARAQKCKELWEKIRMGKTPKAEKDTAVHELYGL 277
Query: 395 MKGKMHEIAVSHVSSRVLQTCLKYCSQAEKEVVYKELHPHFLSLSSNTYSVHVLKKMLDG 574
+KG ++ +H +SRV++ + + ++ EL P + +S N YS +KKML
Sbjct: 278 VKGHAAKLIYAHDTSRVIECLVATEREGIINNLFNELTPEIVRMSKNVYSKFFVKKMLKN 337
Query: 575 ASKQQLSACISSLRGHVAALLRHMVGSVVVEHAYH-LGNAAQKQELLGELYSTELQLFKD 751
+K+Q I++ RGH LLR + V+E+AY+ NA Q+ ++ E Y E LF++
Sbjct: 338 GTKEQRDIIINAFRGHAPTLLRIKHAAEVLEYAYNDFANAHQRYNIITEFYGKEFILFRE 397
Query: 752 LNSTS 766
N S
Sbjct: 398 DNIRS 402
>sp|Q07807|PUF3_YEAST mRNA-binding protein PUF3 OS=Saccharomyces cerevisiae
GN=PUF3 PE=1 SV=1
Length = 879
Score = 65 bits (158), Expect = 3e-010
Identities = 56/226 (24%), Positives = 101/226 (44%), Gaps = 12/226 (5%)
Frame = +2
Query: 107 KDNESSEKPDAKKPKLPPNTIQNQKPKAFGNNNDKGVNLSKKERRVQAKELTEARKKRRK 286
KD ++ +K + K + N++ + N+ N SKK ++ E T K
Sbjct: 437 KDEKTFKKRNNKNHPANNSNNANKQANPYLENSIPTKNTSKKNASSKSNESTANNHKSHS 496
Query: 287 ---PH-YTLEQELAT-----LWEKMRRRDIGKEDRLKLISEALLKMKGKMHEIAVSHVSS 439
PH +L+Q+ T L E++R K + +L + G E S
Sbjct: 497 HSHPHSQSLQQQQQTYHRSPLLEQLRNSSSDKNSNSNM---SLKDIFGHSLEFCKDQHGS 553
Query: 440 RVLQTCLKYCSQAEKEVVYKELHPHFLSLSSNTYSVHVLKKMLDGASKQQLSACISSLRG 619
R +Q L +EKEV++ E+ + LS++ + +V++K + SK Q + + +G
Sbjct: 554 RFIQRELATSPASEKEVIFNEIRDDAIELSNDVFGNYVIQKFFEFGSKIQKNTLVDQFKG 613
Query: 620 HVAALLRHMVGSVVVEHAYHLGNAAQKQELLGELYSTELQLFKDLN 757
++ L M V++ A ++ Q+ EL+ EL + LQ+ KD N
Sbjct: 614 NMKQLSLQMYACRVIQKALEYIDSNQRIELVLELSDSVLQMIKDQN 659
>sp|Q14671|PUM1_HUMAN Pumilio homolog 1 OS=Homo sapiens GN=PUM1 PE=1 SV=3
Length = 1186
Score = 55 bits (130), Expect = 6e-007
Identities = 34/124 (27%), Positives = 62/124 (50%)
Frame = +2
Query: 386 LLKMKGKMHEIAVSHVSSRVLQTCLKYCSQAEKEVVYKELHPHFLSLSSNTYSVHVLKKM 565
L ++ G + E + SR +Q L+ + AE+++V+ E+ L + + +V++K
Sbjct: 846 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 905
Query: 566 LDGASKQQLSACISSLRGHVAALLRHMVGSVVVEHAYHLGNAAQKQELLGELYSTELQLF 745
+ S +Q A +RGHV +L M G V++ A + Q+ E++ EL L+
Sbjct: 906 FEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCV 965
Query: 746 KDLN 757
KD N
Sbjct: 966 KDQN 969
>sp|Q5R5X3|PUM1_PONAB Pumilio homolog 1 OS=Pongo abelii GN=PUM1 PE=2 SV=1
Length = 1186
Score = 55 bits (130), Expect = 6e-007
Identities = 34/124 (27%), Positives = 62/124 (50%)
Frame = +2
Query: 386 LLKMKGKMHEIAVSHVSSRVLQTCLKYCSQAEKEVVYKELHPHFLSLSSNTYSVHVLKKM 565
L ++ G + E + SR +Q L+ + AE+++V+ E+ L + + +V++K
Sbjct: 846 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKF 905
Query: 566 LDGASKQQLSACISSLRGHVAALLRHMVGSVVVEHAYHLGNAAQKQELLGELYSTELQLF 745
+ S +Q A +RGHV +L M G V++ A + Q+ E++ EL L+
Sbjct: 906 FEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCV 965
Query: 746 KDLN 757
KD N
Sbjct: 966 KDQN 969
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 199,641,880,742
Number of Sequences: 518415
Number of Extensions: 199641880742
Number of Successful Extensions: 1223814225
Number of sequences better than 0.0: 0
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