BLASTX 7.6.2
Query= UN55016 /QuerySize=700
(699 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G72730.1 | Symbols: | eukaryotic translation ... 373 6e-104
TAIR9_protein||AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | EIF4... 334 4e-092
TAIR9_protein||AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | EIF4... 334 4e-092
TAIR9_protein||AT1G54270.1 | Symbols: EIF4A-2 | EIF4A-2; ATP-dep... 331 3e-091
TAIR9_protein||AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | EIF4... 309 1e-084
TAIR9_protein||AT3G19760.1 | Symbols: | eukaryotic translation ... 192 2e-049
TAIR9_protein||AT1G51380.1 | Symbols: | eukaryotic translation ... 176 1e-044
TAIR9_protein||AT3G61240.1 | Symbols: | DEAD/DEAH box helicase,... 135 3e-032
TAIR9_protein||AT3G61240.2 | Symbols: | DEAD/DEAH box helicase,... 135 3e-032
TAIR9_protein||AT4G00660.2 | Symbols: | DEAD/DEAH box helicase,... 130 1e-030
TAIR9_protein||AT4G00660.1 | Symbols: | DEAD/DEAH box helicase,... 130 1e-030
TAIR9_protein||AT5G11200.1 | Symbols: | DEAD/DEAH box helicase,... 106 2e-023
TAIR9_protein||AT5G63120.2 | Symbols: | ethylene-responsive DEA... 88 5e-018
TAIR9_protein||AT5G63120.1 | Symbols: | ethylene-responsive DEA... 88 5e-018
TAIR9_protein||AT1G55150.1 | Symbols: | DEAD box RNA helicase, ... 87 1e-017
TAIR9_protein||AT3G02065.2 | Symbols: | DEAD/DEAH box helicase ... 77 7e-015
TAIR9_protein||AT3G02065.1 | Symbols: | DEAD/DEAH box helicase ... 77 7e-015
TAIR9_protein||AT3G02065.3 | Symbols: | DEAD/DEAH box helicase ... 77 7e-015
TAIR9_protein||AT2G33730.1 | Symbols: | DEAD box RNA helicase, ... 77 1e-014
TAIR9_protein||AT1G31970.1 | Symbols: STRS1 | STRS1 (STRESS RESP... 76 2e-014
>TAIR9_protein||AT1G72730.1 | Symbols: | eukaryotic translation initiation
factor 4A, putative / eIF-4A, putative | chr1:27378040-27379593
REVERSE
Length = 415
Score = 373 bits (957), Expect = 6e-104
Identities = 186/199 (93%), Positives = 193/199 (96%)
Frame = +2
Query: 101 MAGMASEGTQYDPRQFDSKMNAILGEEGEETFYTTIDEVCDSFDAMELRSDLLRGIYAYG 280
MAGMAS+GTQYDPRQFD+KMNAILGEEGEETFYT DEVCDSFDAMEL+ DLLRGIYAYG
Sbjct: 1 MAGMASDGTQYDPRQFDTKMNAILGEEGEETFYTNYDEVCDSFDAMELQPDLLRGIYAYG 60
Query: 281 FEKPSAIQQRGIIPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYTLVQCQALVLAPTRE 460
FEKPSAIQQRGIIPFCKGLDVIQQAQSGTGKTATFCSGVLQQLD +LVQCQALVLAPTRE
Sbjct: 61 FEKPSAIQQRGIIPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDISLVQCQALVLAPTRE 120
Query: 461 LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRRSLR 640
LAQQIEKVMRALGDYLGVK ACVGGTSVREDQR+LQSGVHVVVGTPGRVFD+LRR+SLR
Sbjct: 121 LAQQIEKVMRALGDYLGVKAQACVGGTSVREDQRVLQSGVHVVVGTPGRVFDLLRRQSLR 180
Query: 641 ADAIKMFVLDEADEMLSRG 697
ADAIKMFVLDEADEMLSRG
Sbjct: 181 ADAIKMFVLDEADEMLSRG 199
>TAIR9_protein||AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | EIF4A1 (EUKARYOTIC
TRANSLATION INITIATION FACTOR 4A1); ATP-dependent helicase/ translation
initiation factor | chr3:4592635-4594128 REVERSE
Length = 413
Score = 334 bits (855), Expect = 4e-092
Identities = 166/197 (84%), Positives = 184/197 (93%), Gaps = 2/197 (1%)
Frame = +2
Query: 107 GMASEGTQYDPRQFDSKMNAILGEEGEETFYTTIDEVCDSFDAMELRSDLLRGIYAYGFE 286
G A EGTQ+D RQFD K+N +L EG++ F+T+ D+V +SFDAM L+ +LLRGIYAYGFE
Sbjct: 3 GSAPEGTQFDARQFDQKLNEVL--EGQDEFFTSYDDVHESFDAMGLQENLLRGIYAYGFE 60
Query: 287 KPSAIQQRGIIPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYTLVQCQALVLAPTRELA 466
KPSAIQQRGI+PFCKGLDVIQQAQSGTGKTATFCSGVLQQLD++L+QCQALVLAPTRELA
Sbjct: 61 KPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDFSLIQCQALVLAPTRELA 120
Query: 467 QQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRRSLRAD 646
QQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQ+GVHVVVGTPGRVFDML+R+SLRAD
Sbjct: 121 QQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRAD 180
Query: 647 AIKMFVLDEADEMLSRG 697
IKMFVLDEADEMLSRG
Sbjct: 181 NIKMFVLDEADEMLSRG 197
>TAIR9_protein||AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | EIF4A1 (EUKARYOTIC
TRANSLATION INITIATION FACTOR 4A1); ATP-dependent helicase/ translation
initiation factor | chr3:4592586-4594128 REVERSE
Length = 416
Score = 334 bits (855), Expect = 4e-092
Identities = 166/197 (84%), Positives = 184/197 (93%), Gaps = 2/197 (1%)
Frame = +2
Query: 107 GMASEGTQYDPRQFDSKMNAILGEEGEETFYTTIDEVCDSFDAMELRSDLLRGIYAYGFE 286
G A EGTQ+D RQFD K+N +L EG++ F+T+ D+V +SFDAM L+ +LLRGIYAYGFE
Sbjct: 3 GSAPEGTQFDARQFDQKLNEVL--EGQDEFFTSYDDVHESFDAMGLQENLLRGIYAYGFE 60
Query: 287 KPSAIQQRGIIPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYTLVQCQALVLAPTRELA 466
KPSAIQQRGI+PFCKGLDVIQQAQSGTGKTATFCSGVLQQLD++L+QCQALVLAPTRELA
Sbjct: 61 KPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDFSLIQCQALVLAPTRELA 120
Query: 467 QQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRRSLRAD 646
QQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQ+GVHVVVGTPGRVFDML+R+SLRAD
Sbjct: 121 QQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRAD 180
Query: 647 AIKMFVLDEADEMLSRG 697
IKMFVLDEADEMLSRG
Sbjct: 181 NIKMFVLDEADEMLSRG 197
>TAIR9_protein||AT1G54270.1 | Symbols: EIF4A-2 | EIF4A-2; ATP-dependent
helicase/ translation initiation factor | chr1:20260495-20262018
FORWARD
Length = 413
Score = 331 bits (847), Expect = 3e-091
Identities = 165/197 (83%), Positives = 181/197 (91%), Gaps = 2/197 (1%)
Frame = +2
Query: 107 GMASEGTQYDPRQFDSKMNAILGEEGEETFYTTIDEVCDSFDAMELRSDLLRGIYAYGFE 286
G A EGTQ+D RQFD ++N +L +G++ F+T+ DEV +SFDAM L+ +LLRGIYAYGFE
Sbjct: 3 GSAPEGTQFDTRQFDQRLNEVL--DGQDEFFTSYDEVHESFDAMGLQENLLRGIYAYGFE 60
Query: 287 KPSAIQQRGIIPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYTLVQCQALVLAPTRELA 466
KPSAIQQRGI+PFCKGLDVIQQAQSGTGKTATFCSGVLQQLDY L+QCQALVLAPTRELA
Sbjct: 61 KPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYALLQCQALVLAPTRELA 120
Query: 467 QQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRRSLRAD 646
QQIEKVMRALGDY GVKVHACVGGTSVREDQRILQ+GVHVVVGTPGRVFDMLRR+SLR D
Sbjct: 121 QQIEKVMRALGDYQGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPD 180
Query: 647 AIKMFVLDEADEMLSRG 697
IKMFVLDEADEMLSRG
Sbjct: 181 CIKMFVLDEADEMLSRG 197
>TAIR9_protein||AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | EIF4A1 (EUKARYOTIC
TRANSLATION INITIATION FACTOR 4A1); ATP-dependent helicase/ translation
initiation factor | chr3:4592635-4594094 REVERSE
Length = 403
Score = 309 bits (790), Expect = 1e-084
Identities = 152/173 (87%), Positives = 167/173 (96%)
Frame = +2
Query: 179 EGEETFYTTIDEVCDSFDAMELRSDLLRGIYAYGFEKPSAIQQRGIIPFCKGLDVIQQAQ 358
EG++ F+T+ D+V +SFDAM L+ +LLRGIYAYGFEKPSAIQQRGI+PFCKGLDVIQQAQ
Sbjct: 15 EGQDEFFTSYDDVHESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQ 74
Query: 359 SGTGKTATFCSGVLQQLDYTLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGG 538
SGTGKTATFCSGVLQQLD++L+QCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGG
Sbjct: 75 SGTGKTATFCSGVLQQLDFSLIQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGG 134
Query: 539 TSVREDQRILQSGVHVVVGTPGRVFDMLRRRSLRADAIKMFVLDEADEMLSRG 697
TSVREDQRILQ+GVHVVVGTPGRVFDML+R+SLRAD IKMFVLDEADEMLSRG
Sbjct: 135 TSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRG 187
>TAIR9_protein||AT3G19760.1 | Symbols: | eukaryotic translation initiation
factor 4A, putative / eIF-4A, putative / DEAD box RNA helicase,
putative | chr3:6863790-6866242 FORWARD
Length = 409
Score = 192 bits (487), Expect = 2e-049
Identities = 97/175 (55%), Positives = 128/175 (73%), Gaps = 2/175 (1%)
Frame = +2
Query: 179 EGEETFYTTID--EVCDSFDAMELRSDLLRGIYAYGFEKPSAIQQRGIIPFCKGLDVIQQ 352
+ ++ + T D E SF+ M ++ D+LRG+Y YGFEKPSAIQQR ++P +G DVI Q
Sbjct: 19 DDDKLVFETTDGIEPITSFNDMGIKEDVLRGVYEYGFEKPSAIQQRAVMPILQGRDVIAQ 78
Query: 353 AQSGTGKTATFCSGVLQQLDYTLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACV 532
AQSGTGKT+ V Q +D + + QAL+L+PTRELA Q EK ++A+G + ++ HAC+
Sbjct: 79 AQSGTGKTSMIALSVCQVVDTSSREVQALILSPTRELATQTEKTIQAIGLHANIQAHACI 138
Query: 533 GGTSVREDQRILQSGVHVVVGTPGRVFDMLRRRSLRADAIKMFVLDEADEMLSRG 697
GG SV ED R L+ GVHVV GTPGRV DM++RRSLR AIK+ +LDE+DEMLSRG
Sbjct: 139 GGNSVGEDIRKLEHGVHVVSGTPGRVCDMIKRRSLRTRAIKLLILDESDEMLSRG 193
>TAIR9_protein||AT1G51380.1 | Symbols: | eukaryotic translation initiation
factor 4A, putative / eIF-4A, putative | chr1:19047960-19049967
FORWARD
Length = 393
Score = 176 bits (446), Expect = 1e-044
Identities = 84/158 (53%), Positives = 116/158 (73%)
Frame = +2
Query: 224 SFDAMELRSDLLRGIYAYGFEKPSAIQQRGIIPFCKGLDVIQQAQSGTGKTATFCSGVLQ 403
SFD M + +LRG+Y YG++KPS IQQR ++P KG DVI QAQSGTGKT+ V Q
Sbjct: 23 SFDDMGMNDKVLRGVYDYGYKKPSEIQQRALVPILKGRDVIAQAQSGTGKTSMIAISVCQ 82
Query: 404 QLDYTLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQSGVH 583
++ + + Q LVL+P+RELA Q EK ++A+G + ++ HAC+GG S+ ED + L+ GVH
Sbjct: 83 IVNISSRKVQVLVLSPSRELASQTEKTIQAIGAHTNIQAHACIGGKSIGEDIKKLERGVH 142
Query: 584 VVVGTPGRVFDMLRRRSLRADAIKMFVLDEADEMLSRG 697
V GTPGRV+DM++R SL+ A+K+ VLDE+DEMLS+G
Sbjct: 143 AVSGTPGRVYDMIKRGSLQTKAVKLLVLDESDEMLSKG 180
>TAIR9_protein||AT3G61240.1 | Symbols: | DEAD/DEAH box helicase, putative
(RH12) | chr3:22666590-22669154 FORWARD
Length = 499
Score = 135 bits (339), Expect = 3e-032
Identities = 73/171 (42%), Positives = 104/171 (60%), Gaps = 3/171 (1%)
Frame = +2
Query: 188 ETFYTTIDEVC---DSFDAMELRSDLLRGIYAYGFEKPSAIQQRGIIPFCKGLDVIQQAQ 358
+T Y T D + F+ L+ DLL+GIY GFEKPS IQ+ I G D++ +A+
Sbjct: 110 DTRYQTADVTATKGNEFEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARAK 169
Query: 359 SGTGKTATFCSGVLQQLDYTLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGG 538
+GTGKT FC VL+++D QA++L PTRELA Q +V + L YL ++V GG
Sbjct: 170 NGTGKTGAFCIPVLEKIDPNNNVIQAMILVPTRELALQTSQVCKELSKYLNIQVMVTTGG 229
Query: 539 TSVREDQRILQSGVHVVVGTPGRVFDMLRRRSLRADAIKMFVLDEADEMLS 691
TS+R+D L VH++VGTPGR+ D+ ++ M V+DEAD++LS
Sbjct: 230 TSLRDDIMRLHQPVHLLVGTPGRILDLTKKGVCVLKDCAMLVMDEADKLLS 280
>TAIR9_protein||AT3G61240.2 | Symbols: | DEAD/DEAH box helicase, putative
(RH12) | chr3:22666590-22669154 FORWARD
Length = 499
Score = 135 bits (339), Expect = 3e-032
Identities = 73/171 (42%), Positives = 104/171 (60%), Gaps = 3/171 (1%)
Frame = +2
Query: 188 ETFYTTIDEVC---DSFDAMELRSDLLRGIYAYGFEKPSAIQQRGIIPFCKGLDVIQQAQ 358
+T Y T D + F+ L+ DLL+GIY GFEKPS IQ+ I G D++ +A+
Sbjct: 110 DTRYQTADVTATKGNEFEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARAK 169
Query: 359 SGTGKTATFCSGVLQQLDYTLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGG 538
+GTGKT FC VL+++D QA++L PTRELA Q +V + L YL ++V GG
Sbjct: 170 NGTGKTGAFCIPVLEKIDPNNNVIQAMILVPTRELALQTSQVCKELSKYLNIQVMVTTGG 229
Query: 539 TSVREDQRILQSGVHVVVGTPGRVFDMLRRRSLRADAIKMFVLDEADEMLS 691
TS+R+D L VH++VGTPGR+ D+ ++ M V+DEAD++LS
Sbjct: 230 TSLRDDIMRLHQPVHLLVGTPGRILDLTKKGVCVLKDCAMLVMDEADKLLS 280
>TAIR9_protein||AT4G00660.2 | Symbols: | DEAD/DEAH box helicase, putative |
chr4:274638-277438 FORWARD
Length = 506
Score = 130 bits (325), Expect = 1e-030
Identities = 75/190 (39%), Positives = 112/190 (58%), Gaps = 5/190 (2%)
Frame = +2
Query: 134 DPRQFDSKMNAILGEEGEETFYTTIDEVC---DSFDAMELRSDLLRGIYAYGFEKPSAIQ 304
DP D K A L +T Y T D + F+ L+ +LL GIY GFE+PS IQ
Sbjct: 101 DPNSEDWK--ARLKLPAPDTRYRTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQ 158
Query: 305 QRGIIPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYTLVQCQALVLAPTRELAQQIEKV 484
+ I G D++ +A++GTGKTA FC VL+++D QA+++ PTRELA Q +V
Sbjct: 159 EESIPIALTGRDILARAKNGTGKTAAFCIPVLEKIDQDNNVIQAVIIVPTRELALQTSQV 218
Query: 485 MRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRRSLRADAIKMFV 664
+ LG +L ++V GGTS+++D L VH++VGTPGR+ D+ ++ + V
Sbjct: 219 CKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLTKKGVCVLKDCSVLV 278
Query: 665 LDEADEMLSR 694
+DEAD++LS+
Sbjct: 279 MDEADKLLSQ 288
>TAIR9_protein||AT4G00660.1 | Symbols: | DEAD/DEAH box helicase, putative |
chr4:274638-277438 FORWARD
Length = 506
Score = 130 bits (325), Expect = 1e-030
Identities = 75/190 (39%), Positives = 112/190 (58%), Gaps = 5/190 (2%)
Frame = +2
Query: 134 DPRQFDSKMNAILGEEGEETFYTTIDEVC---DSFDAMELRSDLLRGIYAYGFEKPSAIQ 304
DP D K A L +T Y T D + F+ L+ +LL GIY GFE+PS IQ
Sbjct: 101 DPNSEDWK--ARLKLPAPDTRYRTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQ 158
Query: 305 QRGIIPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYTLVQCQALVLAPTRELAQQIEKV 484
+ I G D++ +A++GTGKTA FC VL+++D QA+++ PTRELA Q +V
Sbjct: 159 EESIPIALTGRDILARAKNGTGKTAAFCIPVLEKIDQDNNVIQAVIIVPTRELALQTSQV 218
Query: 485 MRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRRSLRADAIKMFV 664
+ LG +L ++V GGTS+++D L VH++VGTPGR+ D+ ++ + V
Sbjct: 219 CKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLTKKGVCVLKDCSVLV 278
Query: 665 LDEADEMLSR 694
+DEAD++LS+
Sbjct: 279 MDEADKLLSQ 288
>TAIR9_protein||AT5G11200.1 | Symbols: | DEAD/DEAH box helicase, putative |
chr5:3567389-3570686 FORWARD
Length = 428
Score = 106 bits (263), Expect = 2e-023
Identities = 65/151 (43%), Positives = 87/151 (57%), Gaps = 2/151 (1%)
Frame = +2
Query: 242 LRSDLLRGIYAYGFEKPSAIQQRGIIPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYTL 421
L+ +LLR I GFE PS +Q I G+DVI QA+SG GKTA F LQQ++ +
Sbjct: 53 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSP 112
Query: 422 VQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQSGV-HVVVG 595
Q ALVL TRELA QI YL KV GG +++ + +L++ H+VVG
Sbjct: 113 GQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVG 172
Query: 596 TPGRVFDMLRRRSLRADAIKMFVLDEADEML 688
TPGRV + R + L ++ F+LDE D+ML
Sbjct: 173 TPGRVLALAREKDLSLKNVRHFILDECDKML 203
>TAIR9_protein||AT5G63120.2 | Symbols: | ethylene-responsive DEAD box RNA
helicase, putative (RH30) | chr5:25318967-25322071 REVERSE
Length = 592
Score = 88 bits (216), Expect = 5e-018
Identities = 58/162 (35%), Positives = 79/162 (48%), Gaps = 5/162 (3%)
Frame = +2
Query: 227 FDAMELRSDLLRGIYAYGFEKPSAIQQRGIIPFCKGLDVIQQAQSGTGKTATFCSGVLQQ 406
F ++L I GF +P+ IQ +G KG D+I A++G+GKT + L
Sbjct: 167 FQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVH 226
Query: 407 LDYTLVQCQ-----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQ 571
+ Q L+LAPTRELA QI++ R G GV+ GG R L+
Sbjct: 227 VSAQPRLGQDDGPIVLILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLR 286
Query: 572 SGVHVVVGTPGRVFDMLRRRSLRADAIKMFVLDEADEMLSRG 697
GV +V+ TPGR+ DML + + VLDEAD ML G
Sbjct: 287 RGVEIVIATPGRLIDMLECQHTNLKRVTYLVLDEADRMLDMG 328
>TAIR9_protein||AT5G63120.1 | Symbols: | ethylene-responsive DEAD box RNA
helicase, putative (RH30) | chr5:25319798-25322071 REVERSE
Length = 485
Score = 88 bits (216), Expect = 5e-018
Identities = 58/162 (35%), Positives = 79/162 (48%), Gaps = 5/162 (3%)
Frame = +2
Query: 227 FDAMELRSDLLRGIYAYGFEKPSAIQQRGIIPFCKGLDVIQQAQSGTGKTATFCSGVLQQ 406
F ++L I GF +P+ IQ +G KG D+I A++G+GKT + L
Sbjct: 167 FQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVH 226
Query: 407 LDYTLVQCQ-----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQ 571
+ Q L+LAPTRELA QI++ R G GV+ GG R L+
Sbjct: 227 VSAQPRLGQDDGPIVLILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLR 286
Query: 572 SGVHVVVGTPGRVFDMLRRRSLRADAIKMFVLDEADEMLSRG 697
GV +V+ TPGR+ DML + + VLDEAD ML G
Sbjct: 287 RGVEIVIATPGRLIDMLECQHTNLKRVTYLVLDEADRMLDMG 328
>TAIR9_protein||AT1G55150.1 | Symbols: | DEAD box RNA helicase, putative (RH20)
| chr1:20574634-20577141 FORWARD
Length = 502
Score = 87 bits (213), Expect = 1e-017
Identities = 53/153 (34%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Frame = +2
Query: 254 LLRGIYAYGFEKPSAIQQRGIIPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYTLVQCQ 433
+L + GF +P+ IQ +G KG D+I A++G+GKT ++ + ++ +
Sbjct: 110 VLEEVKKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYLLPAIVHVNAQPMLAH 169
Query: 434 -----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGT 598
LVLAPTRELA QI++ G +K GG R LQ GV +V+ T
Sbjct: 170 GDGPIVLVLAPTRELAVQIQQEASKFGSSSKIKTTCIYGGVPKGPQVRDLQKGVEIVIAT 229
Query: 599 PGRVFDMLRRRSLRADAIKMFVLDEADEMLSRG 697
PGR+ DM+ + + VLDEAD ML G
Sbjct: 230 PGRLIDMMESNNTNLRRVTYLVLDEADRMLDMG 262
>TAIR9_protein||AT3G02065.2 | Symbols: | DEAD/DEAH box helicase family protein
| chr3:359136-360734 FORWARD
Length = 506
Score = 77 bits (189), Expect = 7e-015
Identities = 41/88 (46%), Positives = 53/88 (60%)
Frame = +2
Query: 434 ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGTPGRVF 613
A+VLAPTREL Q+E + LG L K VGG + +Q GV +++GTPGRV
Sbjct: 189 AMVLAPTRELCVQVEDQAKMLGKGLPFKTALVVGGDPMSGQLYRIQQGVELIIGTPGRVV 248
Query: 614 DMLRRRSLRADAIKMFVLDEADEMLSRG 697
D+L + ++ D I FVLDE D ML RG
Sbjct: 249 DLLSKHTIELDNIMTFVLDEVDCMLQRG 276
>TAIR9_protein||AT3G02065.1 | Symbols: | DEAD/DEAH box helicase family protein
| chr3:359628-360734 FORWARD
Length = 369
Score = 77 bits (189), Expect = 7e-015
Identities = 41/88 (46%), Positives = 53/88 (60%)
Frame = +2
Query: 434 ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGTPGRVF 613
A+VLAPTREL Q+E + LG L K VGG + +Q GV +++GTPGRV
Sbjct: 52 AMVLAPTRELCVQVEDQAKMLGKGLPFKTALVVGGDPMSGQLYRIQQGVELIIGTPGRVV 111
Query: 614 DMLRRRSLRADAIKMFVLDEADEMLSRG 697
D+L + ++ D I FVLDE D ML RG
Sbjct: 112 DLLSKHTIELDNIMTFVLDEVDCMLQRG 139
>TAIR9_protein||AT3G02065.3 | Symbols: | DEAD/DEAH box helicase family protein
| chr3:359136-360734 FORWARD
Length = 506
Score = 77 bits (189), Expect = 7e-015
Identities = 41/88 (46%), Positives = 53/88 (60%)
Frame = +2
Query: 434 ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGTPGRVF 613
A+VLAPTREL Q+E + LG L K VGG + +Q GV +++GTPGRV
Sbjct: 189 AMVLAPTRELCVQVEDQAKMLGKGLPFKTALVVGGDPMSGQLYRIQQGVELIIGTPGRVV 248
Query: 614 DMLRRRSLRADAIKMFVLDEADEMLSRG 697
D+L + ++ D I FVLDE D ML RG
Sbjct: 249 DLLSKHTIELDNIMTFVLDEVDCMLQRG 276
>TAIR9_protein||AT2G33730.1 | Symbols: | DEAD box RNA helicase, putative |
chr2:14265679-14267880 REVERSE
Length = 734
Score = 77 bits (187), Expect = 1e-014
Identities = 40/88 (45%), Positives = 52/88 (59%)
Frame = +2
Query: 434 ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGTPGRVF 613
A+V+APTRELAQQIE+ YLG +V + VGG S+ E + G +V+ TPGR+
Sbjct: 392 AVVMAPTRELAQQIEEETVKFAHYLGFRVTSIVGGQSIEEQGLKITQGCEIVIATPGRLI 451
Query: 614 DMLRRRSLRADAIKMFVLDEADEMLSRG 697
D L RR + VLDEAD M+ G
Sbjct: 452 DCLERRYAVLNQCNYVVLDEADRMIDMG 479
>TAIR9_protein||AT1G31970.1 | Symbols: STRS1 | STRS1 (STRESS RESPONSE SUPPRESSOR
1); ATP binding / ATP-dependent helicase/ helicase/ nucleic acid
binding | chr1:11479921-11482707 FORWARD
Length = 538
Score = 76 bits (185), Expect = 2e-014
Identities = 40/87 (45%), Positives = 53/87 (60%)
Frame = +2
Query: 437 LVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFD 616
LVL+PTRELA QI V+R G+ G+K GG+S ++SGV +V+GTPGR+ D
Sbjct: 195 LVLSPTRELAVQISDVLREAGEPCGLKSICVYGGSSKGPQISAIRSGVDIVIGTPGRLRD 254
Query: 617 MLRRRSLRADAIKMFVLDEADEMLSRG 697
++ LR + VLDEAD ML G
Sbjct: 255 LIESNVLRLSDVSFVVLDEADRMLDMG 281
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,626,273,657
Number of Sequences: 33410
Number of Extensions: 25626273657
Number of Successful Extensions: 814999693
Number of sequences better than 0.0: 0
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