Library    |     Search    |     Batch query    |     SNP    |     SSR  

TAIR blast output of UN55107


BLASTX 7.6.2

Query= UN55107 /QuerySize=665
        (664 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT5G05210.1 | Symbols:  | nucleolar matrix protei...    153   1e-037
TAIR9_protein||AT5G05210.2 | Symbols:  | nucleolar matrix protei...    148   5e-036

>TAIR9_protein||AT5G05210.1 | Symbols:  | nucleolar matrix protein-related |
        chr5:1548198-1549534 FORWARD

          Length = 387

 Score =  153 bits (385), Expect = 1e-037
 Identities = 82/137 (59%), Positives = 97/137 (70%), Gaps = 9/137 (6%)
 Frame = +3

Query: 108 THMAKKKDKVDSESDVMSCMAHQHAEFFDKLIELIPARFYLPDETERKWFPGLSKAQKAR 287
           T M KKK K  SE D  +   HQH EFFDKLIEL PARFYLPDETERKW+PGLSKAQKAR
Sbjct:   7 TDMTKKKGKHVSEMDFKT---HQHTEFFDKLIELTPARFYLPDETERKWYPGLSKAQKAR 63

Query: 288 AKRKTTENLKKARRDRLDPEKSSLTTLDLLKQKIEKEK------KLSNHEIPDDDDDDDS 449
           AK+KT +NLKKA+RD+LDPEKS+LTTLDLLK+KIEKE+      KL        +   + 
Sbjct:  64 AKKKTNDNLKKAKRDKLDPEKSALTTLDLLKEKIEKERLASQKQKLKKKHADLREQKLEQ 123

Query: 450 EEEEEETDHNKKRKKTD 500
           E+   E   +  +K+TD
Sbjct: 124 EKSGTELPDDDSKKETD 140


 Score =  97 bits (240), Expect = 8e-021
 Identities = 60/129 (46%), Positives = 80/129 (62%), Gaps = 19/129 (14%)
 Frame = +3

Query: 315 KKARRDRLDPEKSSLTT--LDLLKQKIEKEKKLSNHEIPDDD----------DDDDSEEE 458
           +K  ++RL  +K  L     DL +QK+E+EK  S  E+PDDD          +DDDS+EE
Sbjct:  95 EKIEKERLASQKQKLKKKHADLREQKLEQEK--SGTELPDDDSKKETDNNRLNDDDSKEE 152

Query: 459 EEETDHNKKRKKTDEVTYEELRQRLHRKIDELKGGRGGSDRPRPRE-EEEGCA*QEKEGV 635
            +    N ++K    VTYEELR+RLHRKIDELKGGRGGSDRPR  E  ++    + K   
Sbjct: 153 TD----NNRQKDDRSVTYEELRERLHRKIDELKGGRGGSDRPRSNERRKKNLPNKRKRDT 208

Query: 636 SSEDETVED 662
            SE++TVE+
Sbjct: 209 VSEEKTVEE 217

>TAIR9_protein||AT5G05210.2 | Symbols:  | nucleolar matrix protein-related |
        chr5:1548398-1549534 FORWARD

          Length = 379

 Score =  148 bits (371), Expect = 5e-036
 Identities = 79/132 (59%), Positives = 94/132 (71%), Gaps = 9/132 (6%)
 Frame = +3

Query: 123 KKDKVDSESDVMSCMAHQHAEFFDKLIELIPARFYLPDETERKWFPGLSKAQKARAKRKT 302
           KK K  SE D  +   HQH EFFDKLIEL PARFYLPDETERKW+PGLSKAQKARAK+KT
Sbjct:   4 KKGKHVSEMDFKT---HQHTEFFDKLIELTPARFYLPDETERKWYPGLSKAQKARAKKKT 60

Query: 303 TENLKKARRDRLDPEKSSLTTLDLLKQKIEKEK------KLSNHEIPDDDDDDDSEEEEE 464
            +NLKKA+RD+LDPEKS+LTTLDLLK+KIEKE+      KL        +   + E+   
Sbjct:  61 NDNLKKAKRDKLDPEKSALTTLDLLKEKIEKERLASQKQKLKKKHADLREQKLEQEKSGT 120

Query: 465 ETDHNKKRKKTD 500
           E   +  +K+TD
Sbjct: 121 ELPDDDSKKETD 132


 Score =  97 bits (240), Expect = 8e-021
 Identities = 60/129 (46%), Positives = 80/129 (62%), Gaps = 19/129 (14%)
 Frame = +3

Query: 315 KKARRDRLDPEKSSLTT--LDLLKQKIEKEKKLSNHEIPDDD----------DDDDSEEE 458
           +K  ++RL  +K  L     DL +QK+E+EK  S  E+PDDD          +DDDS+EE
Sbjct:  87 EKIEKERLASQKQKLKKKHADLREQKLEQEK--SGTELPDDDSKKETDNNRLNDDDSKEE 144

Query: 459 EEETDHNKKRKKTDEVTYEELRQRLHRKIDELKGGRGGSDRPRPRE-EEEGCA*QEKEGV 635
            +    N ++K    VTYEELR+RLHRKIDELKGGRGGSDRPR  E  ++    + K   
Sbjct: 145 TD----NNRQKDDRSVTYEELRERLHRKIDELKGGRGGSDRPRSNERRKKNLPNKRKRDT 200

Query: 636 SSEDETVED 662
            SE++TVE+
Sbjct: 201 VSEEKTVEE 209

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,626,273,657
Number of Sequences: 33410
Number of Extensions: 25626273657
Number of Successful Extensions: 814999693
Number of sequences better than 0.0: 0