BLASTX 7.6.2
Query= UN55126 /QuerySize=777
(776 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297836592|ref|XP_002886178.1| hypothetical protein ARALYDRAFT... 297 1e-078
gi|14334958|gb|AAK59656.1| putative spliceosome associated prote... 297 2e-078
gi|15224186|ref|NP_179441.1| splicing factor 3B subunit 4 [Arabi... 297 2e-078
gi|21593441|gb|AAM65408.1| putative spliceosome associated prote... 297 2e-078
gi|297831910|ref|XP_002883837.1| predicted protein [Arabidopsis ... 296 3e-078
gi|225430808|ref|XP_002271291.1| PREDICTED: hypothetical protein... 274 1e-071
gi|255550690|ref|XP_002516394.1| spliceosome associated protein,... 268 1e-069
gi|115482332|ref|NP_001064759.1| Os10g0457000 [Oryza sativa Japo... 242 8e-062
gi|222612944|gb|EEE51076.1| hypothetical protein OsJ_31773 [Oryz... 242 8e-062
gi|212274429|ref|NP_001130902.1| hypothetical protein LOC1001920... 233 2e-059
gi|308081546|ref|NP_001183096.1| hypothetical protein LOC1005014... 232 5e-059
gi|242039481|ref|XP_002467135.1| hypothetical protein SORBIDRAFT... 232 5e-059
gi|326519747|dbj|BAK00246.1| predicted protein [Hordeum vulgare ... 231 1e-058
gi|168024568|ref|XP_001764808.1| predicted protein [Physcomitrel... 227 1e-057
gi|297735183|emb|CBI17545.3| unnamed protein product [Vitis vini... 221 1e-055
gi|260841232|ref|XP_002613832.1| hypothetical protein BRAFLDRAFT... 215 8e-054
gi|193783541|dbj|BAG53452.1| unnamed protein product [Homo sapiens] 212 5e-053
gi|5032069|ref|NP_005841.1| splicing factor 3B subunit 4 [Homo s... 211 1e-052
gi|23346437|ref|NP_694693.1| splicing factor 3B subunit 4 [Mus m... 210 2e-052
gi|73981537|ref|XP_540295.2| PREDICTED: similar to splicing fact... 210 2e-052
>gi|297836592|ref|XP_002886178.1| hypothetical protein ARALYDRAFT_480759
[Arabidopsis lyrata subsp. lyrata]
Length = 364
Score = 297 bits (760), Expect = 1e-078
Identities = 150/180 (83%), Positives = 154/180 (85%), Gaps = 6/180 (3%)
Frame = +2
Query: 2 ANLFIDNLDPDVDEKILYDTFSAFGGIASNPKIMRDPDTGNSRGFGFISYDSFDASDAAI 181
ANLFI NLDPDVDEK+LYDTFSAFG IASNPKIMRDPDTGNSRGFGFISYDSF+ASDAAI
Sbjct: 112 ANLFIGNLDPDVDEKLLYDTFSAFGVIASNPKIMRDPDTGNSRGFGFISYDSFEASDAAI 171
Query: 182 EAMTGQYLCNRQITVSYAYKKYTKGERHGTPAERLLAATNPVTQKSRPHTLFASGPPTHP 361
EAMTGQYL NRQITVSYAYKK TKGERHGTPAERLLAATNP QKSRPHTLFASGPP+
Sbjct: 172 EAMTGQYLSNRQITVSYAYKKDTKGERHGTPAERLLAATNPSAQKSRPHTLFASGPPS-- 229
Query: 362 NAPQANGIPRPFVNGGMPPVSIPGPRPTPPPPPPQVYQTQPPPSWQPQPHQQQHGLAVPP 541
NAPQ NG+PRPF NG M P IP PR PPPPPPQVYQTQ PPSW QP QQ G PP
Sbjct: 230 NAPQVNGLPRPFANGSMQPAPIPAPR-QPPPPPPQVYQTQ-PPSWPSQP--QQQGFVSPP 285
>gi|14334958|gb|AAK59656.1| putative spliceosome associated protein [Arabidopsis
thaliana]
Length = 363
Score = 297 bits (759), Expect = 2e-078
Identities = 165/257 (64%), Positives = 177/257 (68%), Gaps = 26/257 (10%)
Frame = +2
Query: 2 ANLFIDNLDPDVDEKILYDTFSAFGGIASNPKIMRDPDTGNSRGFGFISYDSFDASDAAI 181
ANLFI NLDPDVDEK+LYDTFSAFG IASNPKIMRDPDTGNSRGFGFISYDSF+ASDAAI
Sbjct: 112 ANLFIGNLDPDVDEKLLYDTFSAFGVIASNPKIMRDPDTGNSRGFGFISYDSFEASDAAI 171
Query: 182 EAMTGQYLCNRQITVSYAYKKYTKGERHGTPAERLLAATNPVTQKSRPHTLFASGPPTHP 361
E+MTGQYL NRQITVSYAYKK TKGERHGTPAERLLAATNP QKSRPHTLFA GPP+
Sbjct: 172 ESMTGQYLSNRQITVSYAYKKDTKGERHGTPAERLLAATNPTAQKSRPHTLFAMGPPS-- 229
Query: 362 NAPQANGIPRPFVNGGMPPVSIPGPRPTPPPPPPQVYQTQPPPSWQPQPHQQQHGLAVPP 541
+APQ NG+PRPF NG M PV IP PR PPPPPPQVYQTQ PPSW QP QQH + VPP
Sbjct: 230 SAPQVNGLPRPFANGSMQPVPIPAPR-QPPPPPPQVYQTQ-PPSWPSQP--QQHSM-VPP 284
Query: 542 PCSSVLPRECR-------RHHLHSFFISNKVSAVQ--GHHHHHLKPWECTDMDG------ 676
P P+ +H F Q G H H P + G
Sbjct: 285 PMQFRPPQGMPPPPPPQFLNHQQGFGGPRPPPPPQAMGMHQHGGWPPQHMQQQGGPPQQQ 344
Query: 677 ----RRTHAASGPPPPH 715
+ H + PPPPH
Sbjct: 345 QPPYQHHHMSMPPPPPH 361
>gi|15224186|ref|NP_179441.1| splicing factor 3B subunit 4 [Arabidopsis
thaliana]
Length = 363
Score = 297 bits (759), Expect = 2e-078
Identities = 165/257 (64%), Positives = 177/257 (68%), Gaps = 26/257 (10%)
Frame = +2
Query: 2 ANLFIDNLDPDVDEKILYDTFSAFGGIASNPKIMRDPDTGNSRGFGFISYDSFDASDAAI 181
ANLFI NLDPDVDEK+LYDTFSAFG IASNPKIMRDPDTGNSRGFGFISYDSF+ASDAAI
Sbjct: 112 ANLFIGNLDPDVDEKLLYDTFSAFGVIASNPKIMRDPDTGNSRGFGFISYDSFEASDAAI 171
Query: 182 EAMTGQYLCNRQITVSYAYKKYTKGERHGTPAERLLAATNPVTQKSRPHTLFASGPPTHP 361
E+MTGQYL NRQITVSYAYKK TKGERHGTPAERLLAATNP QKSRPHTLFA GPP+
Sbjct: 172 ESMTGQYLSNRQITVSYAYKKDTKGERHGTPAERLLAATNPTAQKSRPHTLFAMGPPS-- 229
Query: 362 NAPQANGIPRPFVNGGMPPVSIPGPRPTPPPPPPQVYQTQPPPSWQPQPHQQQHGLAVPP 541
+APQ NG+PRPF NG M PV IP PR PPPPPPQVYQTQ PPSW QP QQH + VPP
Sbjct: 230 SAPQVNGLPRPFANGSMQPVPIPAPR-QPPPPPPQVYQTQ-PPSWPSQP--QQHSM-VPP 284
Query: 542 PCSSVLPRECR-------RHHLHSFFISNKVSAVQ--GHHHHHLKPWECTDMDG------ 676
P P+ +H F Q G H H P + G
Sbjct: 285 PMQFRPPQGMPPPPPPQFLNHQQGFGGPRPPPPPQAMGMHQHGGWPPQHMQQQGGPPQQQ 344
Query: 677 ----RRTHAASGPPPPH 715
+ H + PPPPH
Sbjct: 345 QPPYQHHHMSMPPPPPH 361
>gi|21593441|gb|AAM65408.1| putative spliceosome associated protein [Arabidopsis
thaliana]
Length = 363
Score = 297 bits (758), Expect = 2e-078
Identities = 150/181 (82%), Positives = 157/181 (86%), Gaps = 7/181 (3%)
Frame = +2
Query: 2 ANLFIDNLDPDVDEKILYDTFSAFGGIASNPKIMRDPDTGNSRGFGFISYDSFDASDAAI 181
ANLFI NLDPDVDEK+LYDTFSAFG IASNPKIMRDPDTGNSRGFGFISYDSF+ASDAAI
Sbjct: 112 ANLFIGNLDPDVDEKLLYDTFSAFGVIASNPKIMRDPDTGNSRGFGFISYDSFEASDAAI 171
Query: 182 EAMTGQYLCNRQITVSYAYKKYTKGERHGTPAERLLAATNPVTQKSRPHTLFASGPPTHP 361
E+MTGQYL NRQITVSYAYKK TKGERHGTPAERLLAATNP QKSRPHTLFA GPP+
Sbjct: 172 ESMTGQYLSNRQITVSYAYKKDTKGERHGTPAERLLAATNPTAQKSRPHTLFAMGPPS-- 229
Query: 362 NAPQANGIPRPFVNGGMPPVSIPGPRPTPPPPPPQVYQTQPPPSWQPQPHQQQHGLAVPP 541
+APQ NG+PRPF NG M PV IP PR PPPPPPQVYQTQ PPSW QP QQH + VPP
Sbjct: 230 SAPQVNGLPRPFANGSMQPVPIPAPR-QPPPPPPQVYQTQ-PPSWPSQP--QQHSM-VPP 284
Query: 542 P 544
P
Sbjct: 285 P 285
>gi|297831910|ref|XP_002883837.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 365
Score = 296 bits (756), Expect = 3e-078
Identities = 159/248 (64%), Positives = 172/248 (69%), Gaps = 27/248 (10%)
Frame = +2
Query: 2 ANLFIDNLDPDVDEKILYDTFSAFGGIASNPKIMRDPDTGNSRGFGFISYDSFDASDAAI 181
ANLFI NLDPDVDEK+LYDTFSAFG +A +PKIMRDPDTGN RGFGFISYDSF+ASDAAI
Sbjct: 112 ANLFIGNLDPDVDEKMLYDTFSAFGMVADHPKIMRDPDTGNPRGFGFISYDSFEASDAAI 171
Query: 182 EAMTGQYLCNRQITVSYAYKKYTKGERHGTPAERLLAATNPVTQKSRPHTLFASGPPTHP 361
EAM+GQYL +RQITVSYAYKK TKGERHGT AERLLAATNP +Q+SRPHTLFASGP T
Sbjct: 172 EAMSGQYLSSRQITVSYAYKKDTKGERHGTQAERLLAATNPSSQRSRPHTLFASGPSTQI 231
Query: 362 NAPQANGIPRPFVNGGMPPVSIPGPRPTPPPPPPQVYQTQPPPSWQPQPHQQQHGLAVPP 541
NAP+ NG+PRPF NGGM PV IP P PPPPPQVYQTQ PPSW QP QQHGL VPP
Sbjct: 232 NAPKVNGLPRPFANGGMQPVPIPAPH---PPPPPQVYQTQ-PPSWPSQP--QQHGLVVPP 285
Query: 542 PCSSVLPRECRR---------HHLHSFFISNKVSAVQ--GHHHHHLKPWECTDMDGRRTH 688
P P + + HH F + Q G H H W H
Sbjct: 286 PPMQFRPPQGMQPQPPPPQFHHHQQGFGVPRPPPPYQAMGMHQH---GWPL-------QH 335
Query: 689 AASGPPPP 712
G PPP
Sbjct: 336 IQQGVPPP 343
>gi|225430808|ref|XP_002271291.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 373
Score = 274 bits (700), Expect = 1e-071
Identities = 141/200 (70%), Positives = 150/200 (75%), Gaps = 15/200 (7%)
Frame = +2
Query: 2 ANLFIDNLDPDVDEKILYDTFSAFGGIASNPKIMRDPDTGNSRGFGFISYDSFDASDAAI 181
ANLF+ NLDPDVDEK+LYDTFSAFG I +NPKIMRDPDTGNSRGFGF+SYDSF+ASDAAI
Sbjct: 112 ANLFVGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFVSYDSFEASDAAI 171
Query: 182 EAMTGQYLCNRQITVSYAYKKYTKGERHGTPAERLLAATNPVTQKSRPHTLFASGPPTHP 361
EAM GQYLCNRQITVSYAYKK TKGERHGTPAER+LAA+NP KSRPHTLFASGPPT P
Sbjct: 172 EAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERVLAASNPSAPKSRPHTLFASGPPTLP 231
Query: 362 NAPQANG------IPRPFVNGGMPPVSIPGPRPTPPPP---PPQVYQTQPPPSWQPQPHQ 514
N PQANG PRPF NG +PPV IP RP PP PP Q PPSWQ QP Q
Sbjct: 232 NVPQANGNMGAPMPPRPFANGVVPPVPIPAMRPPPPQSGAFPPM--QLAGPPSWQGQPQQ 289
Query: 515 ----QQHGLAVPPPCSSVLP 562
Q + PPP P
Sbjct: 290 PGQPMQPPMMPPPPLQQFRP 309
>gi|255550690|ref|XP_002516394.1| spliceosome associated protein, putative
[Ricinus communis]
Length = 376
Score = 268 bits (683), Expect = 1e-069
Identities = 138/194 (71%), Positives = 151/194 (77%), Gaps = 16/194 (8%)
Frame = +2
Query: 2 ANLFIDNLDPDVDEKILYDTFSAFGGIASNPKIMRDPDTGNSRGFGFISYDSFDASDAAI 181
ANLFI NLDPDVDEK+L+DTFSAFG I +NPKIMRDP+TGNSRGFGFISYDSFDASDAAI
Sbjct: 112 ANLFIGNLDPDVDEKLLHDTFSAFGVIVTNPKIMRDPETGNSRGFGFISYDSFDASDAAI 171
Query: 182 EAMTGQYLCNRQITVSYAYKKYTKGERHGTPAERLLAATNPVTQKSRPHTLFASGPPTHP 361
EAM GQYLCNRQITVSYAYKK TKGERHGTPAER+LAA+NP +QKSRPHTLFASGPPT P
Sbjct: 172 EAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERVLAASNPSSQKSRPHTLFASGPPTLP 231
Query: 362 NAPQANGI------PRPFVNGGMPPVSIPGPRPTPPP----PPPQVYQTQPPPSWQ---P 502
+ PQANG PRPF NG +PP +P RP+ PP PP QV P+WQ P
Sbjct: 232 SIPQANGTVGAPVPPRPFANGAVPPGPVPPLRPSAPPTAAFPPMQV---AGQPAWQGQPP 288
Query: 503 QPHQQQHGLAVPPP 544
QP Q +PPP
Sbjct: 289 QPGQVMPPQVMPPP 302
>gi|115482332|ref|NP_001064759.1| Os10g0457000 [Oryza sativa Japonica Group]
Length = 355
Score = 242 bits (615), Expect = 8e-062
Identities = 129/199 (64%), Positives = 146/199 (73%), Gaps = 17/199 (8%)
Frame = +2
Query: 2 ANLFIDNLDPDVDEKILYDTFSAFGGIASNPKIMRDPDTGNSRGFGFISYDSFDASDAAI 181
ANLFI NLDPDVDEK+LYDTFSAFG I +NPKIMRDP+TGNSRGFGF+SYDSF++SD AI
Sbjct: 112 ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFVSYDSFESSDQAI 171
Query: 182 EAMTGQYLCNRQITVSYAYKKYTKGERHGTPAERLLAATNPVTQKSRPHTLFASGPPTHP 361
EAM Q+LCNR ITVSYAYKK TKGERHGTPAERLLAA NP +QK+RPHT+FASGPPT
Sbjct: 172 EAMNNQHLCNRPITVSYAYKKDTKGERHGTPAERLLAANNPGSQKNRPHTMFASGPPTQG 231
Query: 362 NAPQANGIPRPFVNGGMPPVSIPGPRPTPPP----PPPQV--------YQTQPPPSWQPQ 505
A A +PRPF NG +PP I RP PPP PP Q+ TQ PP PQ
Sbjct: 232 LANGA-PVPRPFSNGAVPP-QIQHVRPPPPPMQQFPPMQMNGQPVWPPQNTQLPPHMPPQ 289
Query: 506 PHQQQHGLAVPPPCSSVLP 562
H + AV PP +++P
Sbjct: 290 MHYRP---AVRPPPPNMMP 305
>gi|222612944|gb|EEE51076.1| hypothetical protein OsJ_31773 [Oryza sativa
Japonica Group]
Length = 391
Score = 242 bits (615), Expect = 8e-062
Identities = 129/199 (64%), Positives = 146/199 (73%), Gaps = 17/199 (8%)
Frame = +2
Query: 2 ANLFIDNLDPDVDEKILYDTFSAFGGIASNPKIMRDPDTGNSRGFGFISYDSFDASDAAI 181
ANLFI NLDPDVDEK+LYDTFSAFG I +NPKIMRDP+TGNSRGFGF+SYDSF++SD AI
Sbjct: 112 ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFVSYDSFESSDQAI 171
Query: 182 EAMTGQYLCNRQITVSYAYKKYTKGERHGTPAERLLAATNPVTQKSRPHTLFASGPPTHP 361
EAM Q+LCNR ITVSYAYKK TKGERHGTPAERLLAA NP +QK+RPHT+FASGPPT
Sbjct: 172 EAMNNQHLCNRPITVSYAYKKDTKGERHGTPAERLLAANNPGSQKNRPHTMFASGPPTQG 231
Query: 362 NAPQANGIPRPFVNGGMPPVSIPGPRPTPPP----PPPQV--------YQTQPPPSWQPQ 505
A A +PRPF NG +PP I RP PPP PP Q+ TQ PP PQ
Sbjct: 232 LANGA-PVPRPFSNGAVPP-QIQHVRPPPPPMQQFPPMQMNGQPVWPPQNTQLPPHMPPQ 289
Query: 506 PHQQQHGLAVPPPCSSVLP 562
H + AV PP +++P
Sbjct: 290 MHYRP---AVRPPPPNMMP 305
>gi|212274429|ref|NP_001130902.1| hypothetical protein LOC100192006 [Zea mays]
Length = 357
Score = 233 bits (594), Expect = 2e-059
Identities = 125/190 (65%), Positives = 142/190 (74%), Gaps = 13/190 (6%)
Frame = +2
Query: 2 ANLFIDNLDPDVDEKILYDTFSAFGGIASNPKIMRDPDTGNSRGFGFISYDSFDASDAAI 181
ANLFI NLDPDVDEK+LYDTFSAFG I +NPKIMRDP+TGNSRGFGF+SY+SF++SD AI
Sbjct: 112 ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFVSYESFESSDQAI 171
Query: 182 EAMTGQYLCNRQITVSYAYKKYTKGERHGTPAERLLAATNPVTQKSRPHTLFASGPPT-- 355
EAM Q+LCNR ITVSYAYKK TKGERHGTPAERLLAA NP +QK+RPHT+FASGPPT
Sbjct: 172 EAMNNQHLCNRPITVSYAYKKDTKGERHGTPAERLLAANNPGSQKNRPHTMFASGPPTQG 231
Query: 356 HPNAPQANGIPRPFVNGGMPPVSIPGP-RPTPPPPPPQVYQTQPPPSWQPQP-HQQQHGL 529
HPN +PRP+ NG +IPG + PPPP V Q PP QP QH
Sbjct: 232 HPNG--GPPVPRPYGNG-----TIPGQIQHIRQPPPPPVGQFPPPMQMHGQPTWPAQH-- 282
Query: 530 AVPPPCSSVL 559
++PPP S L
Sbjct: 283 SMPPPMPSQL 292
>gi|308081546|ref|NP_001183096.1| hypothetical protein LOC100501457 [Zea mays]
Length = 359
Score = 232 bits (591), Expect = 5e-059
Identities = 123/189 (65%), Positives = 139/189 (73%), Gaps = 10/189 (5%)
Frame = +2
Query: 2 ANLFIDNLDPDVDEKILYDTFSAFGGIASNPKIMRDPDTGNSRGFGFISYDSFDASDAAI 181
ANLFI NLDPDVDEK+LYDTFSAFG I +NPKIMRDP+TGNSRGFGF+SY+SF++SD AI
Sbjct: 112 ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFVSYESFESSDQAI 171
Query: 182 EAMTGQYLCNRQITVSYAYKKYTKGERHGTPAERLLAATNPVTQKSRPHTLFASGPPTHP 361
EAM Q+LCNR ITVSYAYKK TKGERHGTPAERLLA+ NP +QK+RPHT+FASGPPT
Sbjct: 172 EAMNNQHLCNRPITVSYAYKKDTKGERHGTPAERLLASNNPGSQKNRPHTMFASGPPTQG 231
Query: 362 NAPQANGIPRPFVNGGMPPVSIPG--PRPTPPPPPPQVYQTQPPPSWQPQP-HQQQHGLA 532
+PRPF NG +IPG PPPPP V Q PP QP QH +
Sbjct: 232 LPNGGPPVPRPFGNG-----TIPGQIQHIRQPPPPPPVGQFPPPMQMHGQPAWPAQH--S 284
Query: 533 VPPPCSSVL 559
+PP SS L
Sbjct: 285 MPPHMSSQL 293
>gi|242039481|ref|XP_002467135.1| hypothetical protein SORBIDRAFT_01g020190
[Sorghum bicolor]
Length = 355
Score = 232 bits (591), Expect = 5e-059
Identities = 122/190 (64%), Positives = 139/190 (73%), Gaps = 13/190 (6%)
Frame = +2
Query: 2 ANLFIDNLDPDVDEKILYDTFSAFGGIASNPKIMRDPDTGNSRGFGFISYDSFDASDAAI 181
ANLFI NLDPDVDEK+LYDTFSAFG I +NPKIMRDP+TGNSRGFGF+SYDSF++SD AI
Sbjct: 112 ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFVSYDSFESSDQAI 171
Query: 182 EAMTGQYLCNRQITVSYAYKKYTKGERHGTPAERLLAATNPVTQKSRPHTLFASGPPTHP 361
EAM Q+LCNR ITVSYAYKK TKGERHGTPAERLLAA NP +QK+RPHT+FASGPPT
Sbjct: 172 EAMNNQHLCNRPITVSYAYKKDTKGERHGTPAERLLAANNPGSQKNRPHTMFASGPPTQG 231
Query: 362 NAPQANGIPRPFVNGGMPPVSIPGPRPTPPP----PPPQVYQTQPPPSWQPQPHQQQHGL 529
+PRP+ NG +P +P PPP PPP Q P+W P QQ
Sbjct: 232 LPNGGPPVPRPYGNGTIPGQIQHMRQPPPPPVGQFPPPM--QMHGQPAW---PAQQ---- 282
Query: 530 AVPPPCSSVL 559
+PPP +S L
Sbjct: 283 PMPPPMASQL 292
>gi|326519747|dbj|BAK00246.1| predicted protein [Hordeum vulgare subsp.
vulgare]
Length = 368
Score = 231 bits (587), Expect = 1e-058
Identities = 120/193 (62%), Positives = 135/193 (69%), Gaps = 15/193 (7%)
Frame = +2
Query: 2 ANLFIDNLDPDVDEKILYDTFSAFGGIASNPKIMRDPDTGNSRGFGFISYDSFDASDAAI 181
ANLFI NLDP+VDEK+LYDTFSAFG I +NPKIMRDP+TGNSRGFGF+SYDSF++SD AI
Sbjct: 112 ANLFIGNLDPEVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFVSYDSFESSDQAI 171
Query: 182 EAMTGQYLCNRQITVSYAYKKYTKGERHGTPAERLLAATNPVTQKSRPHTLFASGPPTH- 358
EAM Q+LCNR ITVSYAYKK TKGERHGTPAERLLAA NP +QK RPHT+FA+ PPT
Sbjct: 172 EAMNNQHLCNRPITVSYAYKKDTKGERHGTPAERLLAANNPGSQKHRPHTMFATAPPTQG 231
Query: 359 -PNAPQANGIPRPFVNGGMPPVSIPGPRPTPPPPPPQVYQTQP-----PPSWQPQPHQQQ 520
N +PRPF NG ++PG PPPP V Q P P+W P Q
Sbjct: 232 LQNGGVGAPVPRPFANG-----NVPGQMQHVRPPPPPVGQYPPMQMHGQPAWPGPPQNMQ 286
Query: 521 HGLAVPPPCSSVL 559
VPPP L
Sbjct: 287 Q---VPPPMQQQL 296
>gi|168024568|ref|XP_001764808.1| predicted protein [Physcomitrella patens
subsp. patens]
Length = 414
Score = 227 bits (578), Expect = 1e-057
Identities = 123/189 (65%), Positives = 136/189 (71%), Gaps = 13/189 (6%)
Frame = +2
Query: 2 ANLFIDNLDPDVDEKILYDTFSAFGGIASNPKIMRDPDTGNSRGFGFISYDSFDASDAAI 181
ANLF+ NLDPDVDEK+LYDTFSAFG I +NPKIMRDPD+GNSRGFGFISYDSF+ASD+AI
Sbjct: 112 ANLFVGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDSGNSRGFGFISYDSFEASDSAI 171
Query: 182 EAMTGQYLCNRQITVSYAYKKYTKGERHGTPAERLLAATNPVTQKSRPHTLFASGPPTHP 361
EAM GQYLCNR ITVSYAYKK TKGERHGT AER+LA++NP T KSRPHTLFASGPP+
Sbjct: 172 EAMNGQYLCNRAITVSYAYKKDTKGERHGTLAERMLASSNPNTTKSRPHTLFASGPPSLV 231
Query: 362 NAPQ-ANGIP--RPFVNGGMPPVSIPGPRPTPPPPPPQVYQTQPPPSW--QPQPHQQQHG 526
PQ G+P P NG M P PPP PP W QPQ QQ G
Sbjct: 232 GPPQLGQGLPPAPPQANGNMGM-----PMNGHMHPPPFAGGQGPPLQWGNQPQQMMQQQG 286
Query: 527 L---AVPPP 544
+ +PPP
Sbjct: 287 MPPQGMPPP 295
>gi|297735183|emb|CBI17545.3| unnamed protein product [Vitis vinifera]
Length = 238
Score = 221 bits (562), Expect = 1e-055
Identities = 105/121 (86%), Positives = 112/121 (92%)
Frame = +2
Query: 2 ANLFIDNLDPDVDEKILYDTFSAFGGIASNPKIMRDPDTGNSRGFGFISYDSFDASDAAI 181
ANLF+ NLDPDVDEK+LYDTFSAFG I +NPKIMRDPDTGNSRGFGF+SYDSF+ASDAAI
Sbjct: 112 ANLFVGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFVSYDSFEASDAAI 171
Query: 182 EAMTGQYLCNRQITVSYAYKKYTKGERHGTPAERLLAATNPVTQKSRPHTLFASGPPTHP 361
EAM GQYLCNRQITVSYAYKK TKGERHGTPAER+LAA+NP KSRPHTLFASGPPT P
Sbjct: 172 EAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERVLAASNPSAPKSRPHTLFASGPPTLP 231
Query: 362 N 364
N
Sbjct: 232 N 232
>gi|260841232|ref|XP_002613832.1| hypothetical protein BRAFLDRAFT_72046
[Branchiostoma floridae]
Length = 365
Score = 215 bits (546), Expect = 8e-054
Identities = 109/185 (58%), Positives = 128/185 (69%), Gaps = 10/185 (5%)
Frame = +2
Query: 2 ANLFIDNLDPDVDEKILYDTFSAFGGIASNPKIMRDPDTGNSRGFGFISYDSFDASDAAI 181
AN+FI NLDP++DEK+LYDTFSAFG I PKIMRDP+TGNS+G+ FI++ SFDASDAAI
Sbjct: 100 ANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPETGNSKGYAFINFASFDASDAAI 159
Query: 182 EAMTGQYLCNRQITVSYAYKKYTKGERHGTPAERLLAATNPVTQKSRPHTLFASGPPT-H 358
EAM GQYLCNR IT+SYA+KK +KGERHG+ AERLLAA NP++Q RPH LFA PPT
Sbjct: 160 EAMNGQYLCNRPITISYAFKKDSKGERHGSAAERLLAAQNPLSQADRPHQLFADAPPTPQ 219
Query: 359 PNAPQANGIPRPFVNGGMPPVSIPGPRP---TPPPPPPQVYQTQPPPSWQPQPHQQQHGL 529
N P ++ P+ GMPP +P P P PPPP P PP P P G
Sbjct: 220 SNPPMSSAPPQGGPPPGMPPPGMPPPPPPSGVPPPPMP------PPGMGMPHPRGGPPGP 273
Query: 530 AVPPP 544
PPP
Sbjct: 274 VPPPP 278
>gi|193783541|dbj|BAG53452.1| unnamed protein product [Homo sapiens]
Length = 424
Score = 212 bits (539), Expect = 5e-053
Identities = 115/203 (56%), Positives = 134/203 (66%), Gaps = 17/203 (8%)
Frame = +2
Query: 2 ANLFIDNLDPDVDEKILYDTFSAFGGIASNPKIMRDPDTGNSRGFGFISYDSFDASDAAI 181
AN+FI+NLDP++DEK+LYDTFSAFG I PKIMRDPDTGNS+G+ FI++ SFDASDAAI
Sbjct: 100 ANIFIENLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAI 159
Query: 182 EAMTGQYLCNRQITVSYAYKKYTKGERHGTPAERLLAATNPVTQKSRPHTLFASGPPTHP 361
EAM GQYLCNR ITVSYA+KK +KGERHG+ AERLLAA NP++Q RPH LFA PP P
Sbjct: 160 EAMNGQYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLSQADRPHQLFADAPPP-P 218
Query: 362 NAPQ------ANGIPRPFVNGGMPPVSIPGPRPTPPPPPPQVYQTQPPPSWQPQPHQQQH 523
+AP +G+P P G PP S P P P P PP + PPP P
Sbjct: 219 SAPNPVVSSLGSGLPPP---GMPPPGSFPPPVPPPGALPPGIPPAMPPPPMPP------- 268
Query: 524 GLAVPPPCSSVLPRECRRHHLHS 592
G A P S+ P H HS
Sbjct: 269 GAAGHGPPSAGTPGAGHPGHGHS 291
>gi|5032069|ref|NP_005841.1| splicing factor 3B subunit 4 [Homo sapiens]
Length = 424
Score = 211 bits (536), Expect = 1e-052
Identities = 115/203 (56%), Positives = 133/203 (65%), Gaps = 17/203 (8%)
Frame = +2
Query: 2 ANLFIDNLDPDVDEKILYDTFSAFGGIASNPKIMRDPDTGNSRGFGFISYDSFDASDAAI 181
AN+FI NLDP++DEK+LYDTFSAFG I PKIMRDPDTGNS+G+ FI++ SFDASDAAI
Sbjct: 100 ANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAI 159
Query: 182 EAMTGQYLCNRQITVSYAYKKYTKGERHGTPAERLLAATNPVTQKSRPHTLFASGPPTHP 361
EAM GQYLCNR ITVSYA+KK +KGERHG+ AERLLAA NP++Q RPH LFA PP P
Sbjct: 160 EAMNGQYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLSQADRPHQLFADAPPP-P 218
Query: 362 NAPQ------ANGIPRPFVNGGMPPVSIPGPRPTPPPPPPQVYQTQPPPSWQPQPHQQQH 523
+AP +G+P P G PP S P P P P PP + PPP P
Sbjct: 219 SAPNPVVSSLGSGLPPP---GMPPPGSFPPPVPPPGALPPGIPPAMPPPPMPP------- 268
Query: 524 GLAVPPPCSSVLPRECRRHHLHS 592
G A P S+ P H HS
Sbjct: 269 GAAGHGPPSAGTPGAGHPGHGHS 291
>gi|23346437|ref|NP_694693.1| splicing factor 3B subunit 4 [Mus musculus]
Length = 424
Score = 210 bits (534), Expect = 2e-052
Identities = 107/173 (61%), Positives = 124/173 (71%), Gaps = 10/173 (5%)
Frame = +2
Query: 2 ANLFIDNLDPDVDEKILYDTFSAFGGIASNPKIMRDPDTGNSRGFGFISYDSFDASDAAI 181
AN+FI NLDP++DEK+LYDTFSAFG I PKIMRDPDTGNS+G+ FI++ SFDASDAAI
Sbjct: 100 ANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAI 159
Query: 182 EAMTGQYLCNRQITVSYAYKKYTKGERHGTPAERLLAATNPVTQKSRPHTLFASGPPTHP 361
EAM GQYLCNR ITVSYA+KK +KGERHG+ AERLLAA NP++Q RPH LFA PP P
Sbjct: 160 EAMNGQYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLSQADRPHQLFADAPPP-P 218
Query: 362 NAPQ------ANGIPRPFVNGGMPPVSIPGPRPTPPPPPPQVYQTQPPPSWQP 502
+AP +G+P P G PP S P P P P PP + PPP P
Sbjct: 219 SAPNPVVSSLGSGLPPP---GMPPPGSFPPPVPPPGALPPGIPPAMPPPPMPP 268
>gi|73981537|ref|XP_540295.2| PREDICTED: similar to splicing factor 3b, subunit
4 (predicted) [Canis familiaris]
Length = 409
Score = 210 bits (534), Expect = 2e-052
Identities = 107/173 (61%), Positives = 124/173 (71%), Gaps = 10/173 (5%)
Frame = +2
Query: 2 ANLFIDNLDPDVDEKILYDTFSAFGGIASNPKIMRDPDTGNSRGFGFISYDSFDASDAAI 181
AN+FI NLDP++DEK+LYDTFSAFG I PKIMRDPDTGNS+G+ FI++ SFDASDAAI
Sbjct: 100 ANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAI 159
Query: 182 EAMTGQYLCNRQITVSYAYKKYTKGERHGTPAERLLAATNPVTQKSRPHTLFASGPPTHP 361
EAM GQYLCNR ITVSYA+KK +KGERHG+ AERLLAA NP++Q RPH LFA PP P
Sbjct: 160 EAMNGQYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLSQADRPHQLFADAPPP-P 218
Query: 362 NAPQ------ANGIPRPFVNGGMPPVSIPGPRPTPPPPPPQVYQTQPPPSWQP 502
+AP +G+P P G PP S P P P P PP + PPP P
Sbjct: 219 SAPNPVVSSLGSGLPPP---GMPPPGSFPPPVPPPGALPPGIPPAMPPPPMPP 268
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,751,882,897,479
Number of Sequences: 15229318
Number of Extensions: 5751882897479
Number of Successful Extensions: 1355112730
Number of sequences better than 0.0: 0
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