BLASTX 7.6.2
Query= UN55159 /QuerySize=735
(734 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|334188502|ref|NP_001190572.1| RNA recognition motif-containin... 335 3e-090
gi|30697310|ref|NP_851229.1| RNA recognition motif-containing pr... 331 7e-089
gi|42573738|ref|NP_974965.1| RNA recognition motif-containing pr... 327 1e-087
gi|9757916|dbj|BAB08363.1| RNA and export factor binding protein... 325 4e-087
gi|297793551|ref|XP_002864660.1| hypothetical protein ARALYDRAFT... 325 4e-087
gi|21555029|gb|AAM63758.1| transcriptional coactivator-like prot... 324 1e-086
gi|42568662|ref|NP_200803.3| RNA recognition motif-containing pr... 277 2e-072
gi|186532595|ref|NP_001119461.1| RNA recognition motif-containin... 253 2e-065
gi|255581121|ref|XP_002531375.1| RNA and export factor binding p... 252 4e-065
gi|225435024|ref|XP_002284215.1| PREDICTED: hypothetical protein... 251 9e-065
gi|51490665|emb|CAG26903.1| ALY protein [Nicotiana benthamiana] 231 9e-059
gi|226503573|ref|NP_001145994.1| hypothetical protein LOC1002795... 214 2e-053
gi|242036141|ref|XP_002465465.1| hypothetical protein SORBIDRAFT... 213 3e-053
gi|167999562|ref|XP_001752486.1| predicted protein [Physcomitrel... 206 3e-051
gi|334187381|ref|NP_001190207.1| THO complex subunit 4 [Arabidop... 198 7e-049
gi|147843918|emb|CAN83715.1| hypothetical protein VITISV_023787 ... 196 2e-048
gi|125543328|gb|EAY89467.1| hypothetical protein OsI_10999 [Oryz... 192 5e-047
gi|108707486|gb|ABF95281.1| RNA and export factor-binding protei... 192 6e-047
gi|224059518|ref|XP_002299886.1| predicted protein [Populus tric... 190 2e-046
gi|297600721|ref|NP_001049725.2| Os03g0278300 [Oryza sativa Japo... 187 2e-045
>gi|334188502|ref|NP_001190572.1| RNA recognition motif-containing protein
[Arabidopsis thaliana]
Length = 245
Score = 335 bits (859), Expect = 3e-090
Identities = 169/205 (82%), Positives = 176/205 (85%), Gaps = 1/205 (0%)
Frame = +2
Query: 5 GPIRRNNPNRKSNRSAPYQSSAKAPESTWEHDMYSSEGFPSRSTRSSAGIETGTKLYISN 184
GP RRNNPNRKS RSAPYQ SAKAPESTW HDM+S RS RSSAGIETGTKLYISN
Sbjct: 36 GPTRRNNPNRKSTRSAPYQ-SAKAPESTWGHDMFSDRSEDHRSGRSSAGIETGTKLYISN 94
Query: 185 LDYGVMNDDIKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDAIAAVKKYNDVQLD 364
LDYGVMN+DIKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDA+AAVKKYNDVQLD
Sbjct: 95 LDYGVMNEDIKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDALAAVKKYNDVQLD 154
Query: 365 GKPMKIEIVGNNLQAASAPSGRHGSANFGGASSRRGGHGRGGQQRRGGGGGQGGRGGGRG 544
GKPMKIEIVG NLQ A+APSGR + N GA RGG GRGGQQR GG GG G GGGRG
Sbjct: 155 GKPMKIEIVGTNLQTAAAPSGRPANGNSNGAPWSRGGQGRGGQQRGGGRGGGGRGGGGRG 214
Query: 545 RRSGKGPTEKVSAEDLDADLDKYHA 619
RR GKGP EK+SAEDLDADLDKYH+
Sbjct: 215 RRPGKGPAEKISAEDLDADLDKYHS 239
>gi|30697310|ref|NP_851229.1| RNA recognition motif-containing protein
[Arabidopsis thaliana]
Length = 244
Score = 331 bits (848), Expect = 7e-089
Identities = 169/205 (82%), Positives = 176/205 (85%), Gaps = 2/205 (0%)
Frame = +2
Query: 5 GPIRRNNPNRKSNRSAPYQSSAKAPESTWEHDMYSSEGFPSRSTRSSAGIETGTKLYISN 184
GP RRNNPNRKS RSAPYQ SAKAPESTW HDM+S RS RSSAGIETGTKLYISN
Sbjct: 36 GPTRRNNPNRKSTRSAPYQ-SAKAPESTWGHDMFSDRSEDHRSGRSSAGIETGTKLYISN 94
Query: 185 LDYGVMNDDIKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDAIAAVKKYNDVQLD 364
LDYGVMN+DIKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDA+AAVKKYNDVQLD
Sbjct: 95 LDYGVMNEDIKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDALAAVKKYNDVQLD 154
Query: 365 GKPMKIEIVGNNLQAASAPSGRHGSANFGGASSRRGGHGRGGQQRRGGGGGQGGRGGGRG 544
GKPMKIEIVG NLQ A+APSGR + N GA RGG GRGGQQR GG GG G GGGRG
Sbjct: 155 GKPMKIEIVGTNLQTAAAPSGRPANGNSNGA-PWRGGQGRGGQQRGGGRGGGGRGGGGRG 213
Query: 545 RRSGKGPTEKVSAEDLDADLDKYHA 619
RR GKGP EK+SAEDLDADLDKYH+
Sbjct: 214 RRPGKGPAEKISAEDLDADLDKYHS 238
>gi|42573738|ref|NP_974965.1| RNA recognition motif-containing protein
[Arabidopsis thaliana]
Length = 242
Score = 327 bits (837), Expect = 1e-087
Identities = 167/205 (81%), Positives = 174/205 (84%), Gaps = 4/205 (1%)
Frame = +2
Query: 5 GPIRRNNPNRKSNRSAPYQSSAKAPESTWEHDMYSSEGFPSRSTRSSAGIETGTKLYISN 184
GP RRNNPNRKS RSAPYQS APESTW HDM+S RS RSSAGIETGTKLYISN
Sbjct: 36 GPTRRNNPNRKSTRSAPYQS---APESTWGHDMFSDRSEDHRSGRSSAGIETGTKLYISN 92
Query: 185 LDYGVMNDDIKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDAIAAVKKYNDVQLD 364
LDYGVMN+DIKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDA+AAVKKYNDVQLD
Sbjct: 93 LDYGVMNEDIKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDALAAVKKYNDVQLD 152
Query: 365 GKPMKIEIVGNNLQAASAPSGRHGSANFGGASSRRGGHGRGGQQRRGGGGGQGGRGGGRG 544
GKPMKIEIVG NLQ A+APSGR + N GA RGG GRGGQQR GG GG G GGGRG
Sbjct: 153 GKPMKIEIVGTNLQTAAAPSGRPANGNSNGA-PWRGGQGRGGQQRGGGRGGGGRGGGGRG 211
Query: 545 RRSGKGPTEKVSAEDLDADLDKYHA 619
RR GKGP EK+SAEDLDADLDKYH+
Sbjct: 212 RRPGKGPAEKISAEDLDADLDKYHS 236
>gi|9757916|dbj|BAB08363.1| RNA and export factor binding protein 2-I-like
protein [Arabidopsis thaliana]
Length = 239
Score = 325 bits (833), Expect = 4e-087
Identities = 166/205 (80%), Positives = 173/205 (84%), Gaps = 7/205 (3%)
Frame = +2
Query: 5 GPIRRNNPNRKSNRSAPYQSSAKAPESTWEHDMYSSEGFPSRSTRSSAGIETGTKLYISN 184
GP RRNNPNRKS RSAPYQ SAKAPESTW HDM+S RS RSSAGIETGTKLYISN
Sbjct: 36 GPTRRNNPNRKSTRSAPYQ-SAKAPESTWGHDMFSDRSEDHRSGRSSAGIETGTKLYISN 94
Query: 185 LDYGVMNDDIKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDAIAAVKKYNDVQLD 364
LDYGVMN+DIKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDA+AAVKKYNDVQLD
Sbjct: 95 LDYGVMNEDIKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDALAAVKKYNDVQLD 154
Query: 365 GKPMKIEIVGNNLQAASAPSGRHGSANFGGASSRRGGHGRGGQQRRGGGGGQGGRGGGRG 544
GKPMKIEIVG NLQ A+APSGR + N GG GRGGQQR GG GG G GGGRG
Sbjct: 155 GKPMKIEIVGTNLQTAAAPSGRPANGN------SNGGQGRGGQQRGGGRGGGGRGGGGRG 208
Query: 545 RRSGKGPTEKVSAEDLDADLDKYHA 619
RR GKGP EK+SAEDLDADLDKYH+
Sbjct: 209 RRPGKGPAEKISAEDLDADLDKYHS 233
>gi|297793551|ref|XP_002864660.1| hypothetical protein ARALYDRAFT_496130
[Arabidopsis lyrata subsp. lyrata]
Length = 239
Score = 325 bits (833), Expect = 4e-087
Identities = 170/207 (82%), Positives = 177/207 (85%), Gaps = 7/207 (3%)
Frame = +2
Query: 5 GPIRRNNPNRKSNRSAPYQSSAKAPESTWEHDMYS--SEGFPSRSTRSSAGIETGTKLYI 178
GP RRNNPNRKS RSAPYQ SAKAPESTW HDM+S SE FP RSSAGIETGTKLYI
Sbjct: 32 GPTRRNNPNRKSTRSAPYQ-SAKAPESTWGHDMFSDRSEDFP---PRSSAGIETGTKLYI 87
Query: 179 SNLDYGVMNDDIKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDAIAAVKKYNDVQ 358
SNLDYGVMN+DIKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDA+AAVKKYNDVQ
Sbjct: 88 SNLDYGVMNEDIKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDALAAVKKYNDVQ 147
Query: 359 LDGKPMKIEIVGNNLQAASAPSGRHGSANFGGASSRRGGHGRGGQQRRGGGGGQGGRGGG 538
LDGKPMKIEIVG NLQ A+APSGR + N GA RGG GRGGQQR GG GG GGG
Sbjct: 148 LDGKPMKIEIVGTNLQTAAAPSGRPANGNSNGA-PWRGGQGRGGQQRGGGRGGGARGGGG 206
Query: 539 RGRRSGKGPTEKVSAEDLDADLDKYHA 619
RGRR GKGP EK+SAEDLDADLDKYH+
Sbjct: 207 RGRRPGKGPAEKISAEDLDADLDKYHS 233
>gi|21555029|gb|AAM63758.1| transcriptional coactivator-like protein
[Arabidopsis thaliana]
Length = 243
Score = 324 bits (828), Expect = 1e-086
Identities = 169/206 (82%), Positives = 176/206 (85%), Gaps = 5/206 (2%)
Frame = +2
Query: 5 GPIRRNNPNRKSNRSAPYQSSAKAPESTWEHDMYSSEGFPSRSTRSSAGIETGTKLYISN 184
GP RRNNPNRKS RSAPYQ SAKAPESTW HDM+S RS RSSAGIETGTKLYIS
Sbjct: 36 GPTRRNNPNRKSTRSAPYQ-SAKAPESTWGHDMFSDRSEDHRSGRSSAGIETGTKLYISX 94
Query: 185 LDYGVMNDDIKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDAIAAVKKYNDVQLD 364
LDYGVMN+DIKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDA+AAVKKYNDVQLD
Sbjct: 95 LDYGVMNEDIKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDALAAVKKYNDVQLD 154
Query: 365 GKPMKIEIVGNNLQAASAPSGRHGSANFGGASSRRGGHGRGGQQRRGGGGGQGGR-GGGR 541
GKPMKIEIVG NLQ A+APSGR + N GA RGG GRGGQ RGGG G GGR GGGR
Sbjct: 155 GKPMKIEIVGTNLQTAAAPSGRPANGNSNGA-PWRGGQGRGGQ--RGGGRGGGGRGGGGR 211
Query: 542 GRRSGKGPTEKVSAEDLDADLDKYHA 619
GRR GKGP EK+SAEDLDADLDKYH+
Sbjct: 212 GRRPGKGPAEKISAEDLDADLDKYHS 237
>gi|42568662|ref|NP_200803.3| RNA recognition motif-containing protein
[Arabidopsis thaliana]
Length = 178
Score = 277 bits (706), Expect = 2e-072
Identities = 141/173 (81%), Positives = 148/173 (85%), Gaps = 1/173 (0%)
Frame = +2
Query: 101 MYSSEGFPSRSTRSSAGIETGTKLYISNLDYGVMNDDIKELFAEVGELKRYTVHFDRSGR 280
M+S RS RSSAGIETGTKLYISNLDYGVMN+DIKELFAEVGELKRYTVHFDRSGR
Sbjct: 1 MFSDRSEDHRSGRSSAGIETGTKLYISNLDYGVMNEDIKELFAEVGELKRYTVHFDRSGR 60
Query: 281 SKGTAEVVYSRRGDAIAAVKKYNDVQLDGKPMKIEIVGNNLQAASAPSGRHGSANFGGAS 460
SKGTAEVVYSRRGDA+AAVKKYNDVQLDGKPMKIEIVG NLQ A+APSGR + N GA
Sbjct: 61 SKGTAEVVYSRRGDALAAVKKYNDVQLDGKPMKIEIVGTNLQTAAAPSGRPANGNSNGA- 119
Query: 461 SRRGGHGRGGQQRRGGGGGQGGRGGGRGRRSGKGPTEKVSAEDLDADLDKYHA 619
RGG GRGGQQR GG GG G GGGRGRR GKGP EK+SAEDLDADLDKYH+
Sbjct: 120 PWRGGQGRGGQQRGGGRGGGGRGGGGRGRRPGKGPAEKISAEDLDADLDKYHS 172
>gi|186532595|ref|NP_001119461.1| RNA recognition motif-containing protein
[Arabidopsis thaliana]
Length = 211
Score = 253 bits (645), Expect = 2e-065
Identities = 129/154 (83%), Positives = 134/154 (87%), Gaps = 1/154 (0%)
Frame = +2
Query: 5 GPIRRNNPNRKSNRSAPYQSSAKAPESTWEHDMYSSEGFPSRSTRSSAGIETGTKLYISN 184
GP RRNNPNRKS RSAPYQ SAKAPESTW HDM+S RS RSSAGIETGTKLYISN
Sbjct: 36 GPTRRNNPNRKSTRSAPYQ-SAKAPESTWGHDMFSDRSEDHRSGRSSAGIETGTKLYISN 94
Query: 185 LDYGVMNDDIKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDAIAAVKKYNDVQLD 364
LDYGVMN+DIKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDA+AAVKKYNDVQLD
Sbjct: 95 LDYGVMNEDIKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDALAAVKKYNDVQLD 154
Query: 365 GKPMKIEIVGNNLQAASAPSGRHGSANFGGASSR 466
GKPMKIEIVG NLQ A+APSGR + N GA R
Sbjct: 155 GKPMKIEIVGTNLQTAAAPSGRPANGNSNGAPWR 188
>gi|255581121|ref|XP_002531375.1| RNA and export factor binding protein,
putative [Ricinus communis]
Length = 247
Score = 252 bits (643), Expect = 4e-065
Identities = 134/210 (63%), Positives = 164/210 (78%), Gaps = 11/210 (5%)
Frame = +2
Query: 14 RRNNPNRKSNRSAPYQSSAKAPESTWEHDMYSSEG----FPSRSTRSS--AGIETGTKLY 175
RR N NR +NR+APY ++AKAPESTW+HDM++ +G F + S +GIETGTKLY
Sbjct: 37 RRFN-NRGTNRAAPY-AAAKAPESTWQHDMFTDQGGMGMFQGQGGGGSRASGIETGTKLY 94
Query: 176 ISNLDYGVMNDDIKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDAIAAVKKYNDV 355
ISNL+YGV N+DIKELF+EVG+LKRY++H+DRSGRSKGTAEVV+SRR DA+AAVK+YN+V
Sbjct: 95 ISNLEYGVSNEDIKELFSEVGDLKRYSIHYDRSGRSKGTAEVVFSRRTDALAAVKRYNNV 154
Query: 356 QLDGKPMKIEIVGNNLQAASAPSGRHGSANFGGAS-SRRGGHGRGGQQRRGGGGGQGGRG 532
QLDGKPMKIEIVG N+ +A +G NFG ++ + RGG GRGG RR G GRG
Sbjct: 155 QLDGKPMKIEIVGTNIATPAATPAANG--NFGNSNGAPRGGQGRGGTMRRPRGASSDGRG 212
Query: 533 GGRGRRSGKGPTEKVSAEDLDADLDKYHAE 622
GRGR G+G EKVSAEDLDADL+KYH+E
Sbjct: 213 FGRGRGRGRGRGEKVSAEDLDADLEKYHSE 242
>gi|225435024|ref|XP_002284215.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 243
Score = 251 bits (640), Expect = 9e-065
Identities = 135/212 (63%), Positives = 167/212 (78%), Gaps = 14/212 (6%)
Frame = +2
Query: 5 GPIRRNNPNRKSNRSAPYQSSAKAPESTWEHDMYSSE--GFPSRSTRSSAGIETGTKLYI 178
GP RR PNR +NR PY S +KAPE+TW+HDM++ + +P+++ R+SA IETGTKLYI
Sbjct: 35 GPARR-LPNRGANRITPY-SVSKAPETTWQHDMFADQAAAYPAQAGRTSA-IETGTKLYI 91
Query: 179 SNLDYGVMNDDIKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDAIAAVKKYNDVQ 358
SNLDYGV N+DIKELF+EVG+LKRY++H+DRSGRSKGTAEVV+SRRGDA+AAVK+YN+VQ
Sbjct: 92 SNLDYGVSNEDIKELFSEVGDLKRYSIHYDRSGRSKGTAEVVFSRRGDAVAAVKRYNNVQ 151
Query: 359 LDGKPMKIEIVGNNLQAASA----PSGRHGSANFGGASSRRGGHGRGGQQRRGGGGGQGG 526
LDGKPMKIEIVG N+ +A +G G++N GG S +G G G+ R GG GG
Sbjct: 152 LDGKPMKIEIVGTNIATPAAVPPVTNGTFGNSN-GGLRSAQGRVGSQGRPR----GGSGG 206
Query: 527 RGGGRGRRSGKGPTEKVSAEDLDADLDKYHAE 622
RG GRGR G+G EKVSAEDLDADL+KYH+E
Sbjct: 207 RGFGRGRGRGRGRGEKVSAEDLDADLEKYHSE 238
>gi|51490665|emb|CAG26903.1| ALY protein [Nicotiana benthamiana]
Length = 252
Score = 231 bits (588), Expect = 9e-059
Identities = 128/214 (59%), Positives = 157/214 (73%), Gaps = 18/214 (8%)
Frame = +2
Query: 17 RNNPNRKSNRSAPYQSSAKAPESTWEHDMYSS--EGFP---SRSTRSSAGIETGTKLYIS 181
R PNR +NR+APY S+AKAPE+ W HDM+++ + FP + ++++ I TGTKLYIS
Sbjct: 40 RRFPNRSANRAAPY-STAKAPEAAWNHDMFAAADQAFPFGQAGGDQAASSISTGTKLYIS 98
Query: 182 NLDYGVMNDDIKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDAIAAVKKYNDVQL 361
NLDYGV N+DIKELF+E G+LKRY +H+DRSGRSKGTAEVV+SRR DA+AAVK+YN+VQL
Sbjct: 99 NLDYGVSNEDIKELFSEAGDLKRYAIHYDRSGRSKGTAEVVFSRRQDALAAVKRYNNVQL 158
Query: 362 DGKPMKIEIVGNNLQAASAP--SGRHGSANFGGA----SSRRGGHGRGGQQRRGGGGGQG 523
DGKPMKIEIVG N+ +AP +G G + G +R GG GR R G G G+G
Sbjct: 159 DGKPMKIEIVGTNIATPAAPAFNGAFGFGDTNGGPRTDQARSGGFGR---SRGGRGRGRG 215
Query: 524 GRGGGRGR-RSGKGPTEKVSAEDLDADLDKYHAE 622
RGG RGR R +G EKVSAEDLDADL KYH E
Sbjct: 216 FRGGSRGRGRGDRG--EKVSAEDLDADLMKYHTE 247
>gi|226503573|ref|NP_001145994.1| hypothetical protein LOC100279524 [Zea mays]
Length = 253
Score = 214 bits (543), Expect = 2e-053
Identities = 120/211 (56%), Positives = 145/211 (68%), Gaps = 10/211 (4%)
Frame = +2
Query: 5 GPIRRNNPNRKSNRSAPYQSSAKAPESTWEHDMYSSEGFPSRSTRSSAGIETGTKLYISN 184
GP RR+ R NR APYQ KAP++ W+HDMY + + +ETGTKLYISN
Sbjct: 43 GPTRRSF-KRAGNRQAPYQ-PPKAPDAAWQHDMYPAVAAGGGGGGRVSALETGTKLYISN 100
Query: 185 LDYGVMNDDIKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDAIAAVKKYNDVQLD 364
LD+GV NDDIKELF+E+G+LKR+++ +DRSGRSKGTAEVV++RR DA+AAVKKYN+VQLD
Sbjct: 101 LDFGVSNDDIKELFSELGDLKRFSIIYDRSGRSKGTAEVVFARRSDAVAAVKKYNNVQLD 160
Query: 365 GKPMKIEIVGNNLQAASA--PSGRHGSANFGGASSRRGGHGRGGQQRR---GGGGGQGGR 529
GKPMKIEIVG N ASA P G A S+ RG G QRR GG GG
Sbjct: 161 GKPMKIEIVGTNTPTASAALPVSNGGHARNAVRSAPRGAAPAGVPQRRPHQRGGRRSGGS 220
Query: 530 GGGRGRRSGKGPTEKVSAEDLDADLDKYHAE 622
GGG R GK ++ SAE+LDADL+KYHA+
Sbjct: 221 GGG---RRGKERSKPKSAEELDADLEKYHAD 248
>gi|242036141|ref|XP_002465465.1| hypothetical protein SORBIDRAFT_01g039330
[Sorghum bicolor]
Length = 257
Score = 213 bits (540), Expect = 3e-053
Identities = 119/209 (56%), Positives = 144/209 (68%), Gaps = 6/209 (2%)
Frame = +2
Query: 5 GPIRRNNPNRKSNRSAPYQSSAKAPESTWEHDMYSSEGFPSRSTRSSAGIETGTKLYISN 184
GP RR R NR APYQ KAP+ W+HDMY + + +ETGTKLYISN
Sbjct: 47 GPTRRPF-KRAGNRQAPYQ-PPKAPDVAWQHDMYPAVAAGGGGGGRVSALETGTKLYISN 104
Query: 185 LDYGVMNDDIKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDAIAAVKKYNDVQLD 364
LD+GV N+DIKELF+E+G+LKRY++++DRSGRSKGTAEVV++RR DA+AAVKKYN+VQLD
Sbjct: 105 LDFGVSNEDIKELFSELGDLKRYSINYDRSGRSKGTAEVVFARRSDAVAAVKKYNNVQLD 164
Query: 365 GKPMKIEIVGNNLQAASA--PSGRHGSANFGGASSRRGGHGRGGQQRR-GGGGGQGGRGG 535
GKPMKIEIVG N A+A P G A S+ RG G QRR GG+ G G
Sbjct: 165 GKPMKIEIVGTNTPTAAAALPVSNGGHARNAARSAPRGAAPAGMPQRRPHQRGGRRGGGS 224
Query: 536 GRGRRSGKGPTEKVSAEDLDADLDKYHAE 622
G GRR + T K SAE+LDADL+KYHA+
Sbjct: 225 GGGRRGKERSTPK-SAEELDADLEKYHAD 252
>gi|167999562|ref|XP_001752486.1| predicted protein [Physcomitrella patens
subsp. patens]
Length = 249
Score = 206 bits (523), Expect = 3e-051
Identities = 112/205 (54%), Positives = 141/205 (68%), Gaps = 9/205 (4%)
Frame = +2
Query: 29 NRKSNRSAPYQSSAKAPESTWEHDMYSS--EGFPSRSTRSSAGIETGTKLYISNLDYGVM 202
+R+ +A + P+STW+HDMY + PS + GIETGTKLYISNLDYGV
Sbjct: 42 SRRGGATAAADGVRRDPDSTWQHDMYENFLPAAPSSGRGVTGGIETGTKLYISNLDYGVS 101
Query: 203 NDDIKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDAIAAVKKYNDVQLDGKPMKI 382
NDDIKELF EVG+LKR ++++DRSGRSKGTAEVV++R+ DA++A+K+YN+VQLDGKPMKI
Sbjct: 102 NDDIKELFGEVGDLKRCSINYDRSGRSKGTAEVVFTRKPDAVSAMKRYNNVQLDGKPMKI 161
Query: 383 EIVGNNLQAASAPSGRHGSANFGGASSRR----GGHGRGGQQRRGGGGGQGGRGGGRGRR 550
E++G NL AA P+ R A AS R GRGG R GG G GGRG G GR
Sbjct: 162 EMIGTNLIAAPVPAARSSGAMAMVASRGRPVSSAFRGRGG-GRSAGGAGAGGRGAG-GRG 219
Query: 551 SGKGPTE-KVSAEDLDADLDKYHAE 622
G+ T + + EDLDADL+ YHA+
Sbjct: 220 GGRSATAVEKTVEDLDADLESYHAD 244
>gi|334187381|ref|NP_001190207.1| THO complex subunit 4 [Arabidopsis thaliana]
Length = 290
Score = 198 bits (503), Expect = 7e-049
Identities = 121/230 (52%), Positives = 147/230 (63%), Gaps = 38/230 (16%)
Frame = +2
Query: 44 RSAPYQ---SSAKAPESTWEHDMYSSE-----GFPSRSTRSSAG---IETGTKLYISNLD 190
R+APY +A ++ W++D+++++ F T G IETGTKLYISNLD
Sbjct: 57 RTAPYSRPIQQQQAHDAMWQNDVFATDASVAAAFGHHQTAVVGGGSSIETGTKLYISNLD 116
Query: 191 YGVMNDDIKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDAIAAVKKYNDVQLDGK 370
YGV N+DIKELF+EVG+LKRY +H+DRSGRSKGTAEVV+SRRGDA+AAVK+YN+VQLDGK
Sbjct: 117 YGVSNEDIKELFSEVGDLKRYGIHYDRSGRSKGTAEVVFSRRGDALAAVKRYNNVQLDGK 176
Query: 371 PMKIEIVGNNLQAASAP-----------SGRHG----------SANFGGASSRRGGH-GR 484
MKIEIVG NL A + P +G G + NF G RGG GR
Sbjct: 177 LMKIEIVGTNLSAPALPILATAQIPFPTNGILGNFNENFNGNFNGNFNGNFRGRGGFMGR 236
Query: 485 GGQQRRGGGGGQGGRG----GGRGRRSGKGPTEKVSAEDLDADLDKYHAE 622
GGG +GGRG GGRG G+G E VSAEDLDA+LDKYH E
Sbjct: 237 PRGGGFGGGNFRGGRGARGRGGRG-SGGRGRDENVSAEDLDAELDKYHKE 285
>gi|147843918|emb|CAN83715.1| hypothetical protein VITISV_023787 [Vitis
vinifera]
Length = 281
Score = 196 bits (498), Expect = 2e-048
Identities = 104/162 (64%), Positives = 131/162 (80%), Gaps = 10/162 (6%)
Frame = +2
Query: 5 GPIRRNNPNRKSNRSAPYQSSAKAPESTWEHDMYSSE--GFPSRSTRSSAGIETGTKLYI 178
GP RR PNR +NR PY S +KAPE+TW+HDM++ + +P+++ R+SA IETGTKLYI
Sbjct: 35 GPARR-LPNRGANRITPY-SVSKAPETTWQHDMFADQAAAYPAQAGRTSA-IETGTKLYI 91
Query: 179 SNLDYGVMNDDIKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDAIAAVKKYNDVQ 358
SNLDYGV N+DIKELF+EVG+LKRY++H+DRSGRSKGTAEVV+SRRGDA+AAVK+YN+VQ
Sbjct: 92 SNLDYGVSNEDIKELFSEVGDLKRYSIHYDRSGRSKGTAEVVFSRRGDAVAAVKRYNNVQ 151
Query: 359 LDGKPMKIEIVGNNLQAASA----PSGRHGSANFGGASSRRG 472
LDGKPMKIEIVG N+ +A +G G++N GG RG
Sbjct: 152 LDGKPMKIEIVGTNIATPAAVPPVTNGTFGNSN-GGLRRLRG 192
>gi|125543328|gb|EAY89467.1| hypothetical protein OsI_10999 [Oryza sativa Indica
Group]
Length = 273
Score = 192 bits (487), Expect = 5e-047
Identities = 105/185 (56%), Positives = 126/185 (68%), Gaps = 9/185 (4%)
Frame = +2
Query: 32 RKSNRSAPYQSSAKAPESTWEHDMYS----SEGFPSRSTRSSAGIETGTKLYISNLDYGV 199
R NR+ PYQ KAPES W+HDMYS G S + IETGTKLYISNLD+GV
Sbjct: 59 RSGNRAGPYQ-PPKAPESAWQHDMYSDVAAGGGGGSGGGGRVSAIETGTKLYISNLDFGV 117
Query: 200 MNDDIKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDAIAAVKKYNDVQLDGKPMK 379
+DIKELF+E+G+LK+Y +H+DRSGRSKGTAEVV++RRGDA+AAVKKYN+VQLDGKPMK
Sbjct: 118 STEDIKELFSELGDLKKYVIHYDRSGRSKGTAEVVFARRGDAVAAVKKYNNVQLDGKPMK 177
Query: 380 IEIVGNNLQAASA--PSGRHGSANFGGASSRRGGHG--RGGQQRRGGGGGQGGRGGGRGR 547
IEI+G N A+A P+ G S+ RGG G+ R GGG + G GGG G
Sbjct: 178 IEILGTNTPTAAAALPANNGGYVRNVAKSAPRGGPAGLPQGRSRPRGGGRRRGGGGGSGG 237
Query: 548 RSGKG 562
G G
Sbjct: 238 PGGSG 242
>gi|108707486|gb|ABF95281.1| RNA and export factor-binding protein, putative,
expressed [Oryza sativa Japonica Group]
Length = 273
Score = 192 bits (486), Expect = 6e-047
Identities = 105/185 (56%), Positives = 126/185 (68%), Gaps = 9/185 (4%)
Frame = +2
Query: 32 RKSNRSAPYQSSAKAPESTWEHDMYS----SEGFPSRSTRSSAGIETGTKLYISNLDYGV 199
R NR+ PYQ KAPES W+HDMYS G S + IETGTKLYISNLD+GV
Sbjct: 59 RSGNRAGPYQ-PPKAPESAWQHDMYSDVAAGGGGGSGGGGRVSAIETGTKLYISNLDFGV 117
Query: 200 MNDDIKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDAIAAVKKYNDVQLDGKPMK 379
+DIKELF+E+G+LK+Y +H+DRSGRSKGTAEVV++RRGDA+AAVKKYN+VQLDGKPMK
Sbjct: 118 STEDIKELFSELGDLKKYVIHYDRSGRSKGTAEVVFARRGDAVAAVKKYNNVQLDGKPMK 177
Query: 380 IEIVGNNLQAASA--PSGRHGSANFGGASSRRGGHG--RGGQQRRGGGGGQGGRGGGRGR 547
IEI+G N A+A P+ G S+ RGG G+ R GGG + G GGG G
Sbjct: 178 IEILGTNTPTAAAALPANNGGYVRNVAKSAPRGGPAGLPQGRPRPRGGGRRRGGGGGSGG 237
Query: 548 RSGKG 562
G G
Sbjct: 238 PGGSG 242
>gi|224059518|ref|XP_002299886.1| predicted protein [Populus trichocarpa]
Length = 211
Score = 190 bits (481), Expect = 2e-046
Identities = 103/167 (61%), Positives = 127/167 (76%), Gaps = 12/167 (7%)
Frame = +2
Query: 2 SGPIRRNNPNRKSNRSAPYQSSAKAPESTWEHDMYSSEGFPSRSTRSSAGIETGTKLYIS 181
+GP RR PNR +NRSAPY ++AKAPESTW+HDM F +S R+S+ G KLY+S
Sbjct: 35 AGPARR-FPNRAANRSAPY-TAAKAPESTWQHDM-----FRDQSGRTSS--LEGAKLYVS 85
Query: 182 NLDYGVMNDDIKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDAIAAVKKYNDVQL 361
NLDYGV N+DIKELF EVGELKRY++H+DRSGRSKGTAEVV++R+ +A+AAVK+YN+VQL
Sbjct: 86 NLDYGVSNEDIKELFLEVGELKRYSIHYDRSGRSKGTAEVVFARQAEAVAAVKRYNNVQL 145
Query: 362 DGKPMKIEIVGNNLQAASAPSGRHGS-ANFGGASSRRGGHGRGGQQR 499
DGKPMKIEIVG N A AP + + N G S R G GRGG ++
Sbjct: 146 DGKPMKIEIVGTNFVAPPAPPAANAAFGNSNGVSGR--GRGRGGGEK 190
>gi|297600721|ref|NP_001049725.2| Os03g0278300 [Oryza sativa Japonica Group]
Length = 238
Score = 187 bits (473), Expect = 2e-045
Identities = 106/186 (56%), Positives = 126/186 (67%), Gaps = 10/186 (5%)
Frame = +2
Query: 32 RKSNRSA-PYQSSAKAPESTWEHDMYS----SEGFPSRSTRSSAGIETGTKLYISNLDYG 196
R N SA PYQ KAPES W+HDMYS G S + IETGTKLYISNLD+G
Sbjct: 23 RSPNPSAGPYQ-PPKAPESAWQHDMYSDVAAGGGGGSGGGGRVSAIETGTKLYISNLDFG 81
Query: 197 VMNDDIKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDAIAAVKKYNDVQLDGKPM 376
V +DIKELF+E+G+LK+Y +H+DRSGRSKGTAEVV++RRGDA+AAVKKYN+VQLDGKPM
Sbjct: 82 VSTEDIKELFSELGDLKKYVIHYDRSGRSKGTAEVVFARRGDAVAAVKKYNNVQLDGKPM 141
Query: 377 KIEIVGNNLQAASA--PSGRHGSANFGGASSRRGGHG--RGGQQRRGGGGGQGGRGGGRG 544
KIEI+G N A+A P+ G S+ RGG G+ R GGG + G GGG G
Sbjct: 142 KIEILGTNTPTAAAALPANNGGYVRNVAKSAPRGGPAGLPQGRPRPRGGGRRRGGGGGSG 201
Query: 545 RRSGKG 562
G G
Sbjct: 202 GPGGSG 207
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,766,393,936,687
Number of Sequences: 15229318
Number of Extensions: 5766393936687
Number of Successful Extensions: 1363926624
Number of sequences better than 0.0: 0
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