BLASTX 7.6.2
Query= UN55159 /QuerySize=735
(734 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q86V81|THOC4_HUMAN THO complex subunit 4 OS=Homo sapiens GN=T... 171 5e-042
sp|Q3T0I4|THOC4_BOVIN THO complex subunit 4 OS=Bos taurus GN=THO... 169 2e-041
sp|B5FXN8|THOC4_TAEGU THO complex subunit 4 OS=Taeniopygia gutta... 169 3e-041
sp|Q28FB9|THOC4_XENTR THO complex subunit 4 OS=Xenopus tropicali... 169 3e-041
sp|O08583|THOC4_MOUSE THO complex subunit 4 OS=Mus musculus GN=T... 165 4e-040
sp|Q58EA2|THO4A_XENLA THO complex subunit 4-A OS=Xenopus laevis ... 161 6e-039
sp|Q6GLW1|THO4B_XENLA THO complex subunit 4-B OS=Xenopus laevis ... 156 2e-037
sp|Q9JJW6|REFP2_MOUSE RNA and export factor-binding protein 2 OS... 143 1e-033
sp|P19469|EGG2_SCHJA Eggshell protein 2A OS=Schistosoma japonicu... 57 1e-007
sp|P04147|PABP_YEAST Polyadenylate-binding protein, cytoplasmic ... 51 8e-006
>sp|Q86V81|THOC4_HUMAN THO complex subunit 4 OS=Homo sapiens GN=THOC4 PE=1 SV=3
Length = 257
Score = 171 bits (432), Expect = 5e-042
Identities = 95/195 (48%), Positives = 128/195 (65%), Gaps = 16/195 (8%)
Frame = +2
Query: 41 NRSAPYQSSAKAPESTWEHDMYSSEGFPSRSTRSSAGIETGTKLYISNLDYGVMNDDIKE 220
NR APY + P+ W+HD++ S GF AG+ETG KL +SNLD+GV + DI+E
Sbjct: 72 NRPAPYSRPKQLPDK-WQHDLFDS-GF-----GGGAGVETGGKLLVSNLDFGVSDADIQE 124
Query: 221 LFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDAIAAVKKYNDVQLDGKPMKIEIVGNN 400
LFAE G LK+ VH+DRSGRS GTA+V + R+ DA+ A+K+YN V LDG+PM I++V +
Sbjct: 125 LFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTSQ 184
Query: 401 LQAASAPSGRHGSANFGGASSRRGGHGRGGQQRRGGGGGQGGRGG--GRGRRSGKGPTEK 574
+ A P+ S N GG + RG G GG GGG +G RGG GRGR +G+ ++
Sbjct: 185 IDAQRRPA---QSVNRGGMTRNRGAGGFGG----GGGTRRGTRGGARGRGRGAGRNSKQQ 237
Query: 575 VSAEDLDADLDKYHA 619
+SAE+LDA LD Y+A
Sbjct: 238 LSAEELDAQLDAYNA 252
>sp|Q3T0I4|THOC4_BOVIN THO complex subunit 4 OS=Bos taurus GN=THOC4 PE=2 SV=1
Length = 257
Score = 169 bits (428), Expect = 2e-041
Identities = 94/195 (48%), Positives = 127/195 (65%), Gaps = 16/195 (8%)
Frame = +2
Query: 41 NRSAPYQSSAKAPESTWEHDMYSSEGFPSRSTRSSAGIETGTKLYISNLDYGVMNDDIKE 220
NR APY + P+ W+HD++ S GF AG+ETG KL +SNLD+GV + DI+E
Sbjct: 72 NRPAPYSRPKQLPDK-WQHDLFDS-GF-----GGGAGVETGGKLLVSNLDFGVSDADIQE 124
Query: 221 LFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDAIAAVKKYNDVQLDGKPMKIEIVGNN 400
LFAE G LK+ VH+DRSGRS GTA+V + R+ DA+ A+K+YN V LDG+PM I++V +
Sbjct: 125 LFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTSQ 184
Query: 401 LQAASAPSGRHGSANFGGASSRRGGHGRGGQQRRGGGGGQGGRGG--GRGRRSGKGPTEK 574
+ P+ S N GG + RG G GG GGG +G RGG GRGR +G+ ++
Sbjct: 185 IDTQRRPA---QSVNRGGMTRNRGSGGFGG----GGGTRRGTRGGSRGRGRGTGRSSKQQ 237
Query: 575 VSAEDLDADLDKYHA 619
+SAE+LDA LD Y+A
Sbjct: 238 LSAEELDAQLDAYNA 252
>sp|B5FXN8|THOC4_TAEGU THO complex subunit 4 OS=Taeniopygia guttata GN=THOC4
PE=2 SV=1
Length = 254
Score = 169 bits (426), Expect = 3e-041
Identities = 101/211 (47%), Positives = 131/211 (62%), Gaps = 21/211 (9%)
Frame = +2
Query: 5 GPIRRNNP----NRKSNRSAPYQSSAKAPESTWEHDMYSSEGFPSRSTRSSAGIETGTKL 172
GP+ RN P NR APY + PE W+HD++ S GF + AG+ETG KL
Sbjct: 54 GPV-RNRPVMARGGGRNRPAPYSRPKQLPEK-WQHDLFDS-GF-----GAGAGVETGGKL 105
Query: 173 YISNLDYGVMNDDIKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDAIAAVKKYND 352
+SNLD+GV + DI+ELFAE G LK+ VH+DRSGRS GTA+V + R+ DA+ A+K+YN
Sbjct: 106 LVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNG 165
Query: 353 VQLDGKPMKIEIVGNNLQAASAPSGRHGSANFGGASSRRGGHGRGGQQRRGGGGGQGGRG 532
V LDG+PM I++V + + P+ S N GG + RG G G GGG +G RG
Sbjct: 166 VPLDGRPMNIQLVTSQIDTQRRPA---QSVNRGGMTRNRGVLGGFG----GGGNRRGTRG 218
Query: 533 GGRGRRSGKGPTEK--VSAEDLDADLDKYHA 619
G RGR G G T K +SAE+LDA LD Y+A
Sbjct: 219 GNRGRGRGAGRTSKQQLSAEELDAQLDAYNA 249
>sp|Q28FB9|THOC4_XENTR THO complex subunit 4 OS=Xenopus tropicalis GN=thoc4 PE=2
SV=1
Length = 260
Score = 169 bits (426), Expect = 3e-041
Identities = 94/194 (48%), Positives = 126/194 (64%), Gaps = 14/194 (7%)
Frame = +2
Query: 41 NRSAPYQSSAKAPESTWEHDMYSSEGFPSRSTRSSAGIETGTKLYISNLDYGVMNDDIKE 220
NR APY + P+ W+HD++ S GF + AG+ETG KL +SNLD+GV + DI+E
Sbjct: 75 NRPAPYSRPKQLPDK-WQHDLFDS-GF-----GTGAGMETGGKLLVSNLDFGVSDADIQE 127
Query: 221 LFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDAIAAVKKYNDVQLDGKPMKIEIVGNN 400
LFAE G LK+ VH+DRSGRS GTA+V + R+ DA+ A+K+YN V LDG+PM I++V +
Sbjct: 128 LFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTSQ 187
Query: 401 LQAASAPSGRHGSANFGGASSRRGGH-GRGGQQRRGGGGGQGGRGGGRGRRSGKGPTEKV 577
++A P + GG + RGG G G RRGG GG GRG G GR P +++
Sbjct: 188 IEAQRRPI--QSQSRGGGITRPRGGAIGFSGANRRGGRGGNRGRGRGAGR----NPKQQL 241
Query: 578 SAEDLDADLDKYHA 619
SAE+LDA LD Y+A
Sbjct: 242 SAEELDAQLDAYNA 255
>sp|O08583|THOC4_MOUSE THO complex subunit 4 OS=Mus musculus GN=Thoc4 PE=1 SV=3
Length = 255
Score = 165 bits (416), Expect = 4e-040
Identities = 92/194 (47%), Positives = 125/194 (64%), Gaps = 17/194 (8%)
Frame = +2
Query: 41 NRSAPYQSSAKAPESTWEHDMYSSEGFPSRSTRSSAGIETGTKLYISNLDYGVMNDDIKE 220
NR APY + P+ W+HD++ S GF AG+ETG KL +SNLD+GV + DI+E
Sbjct: 71 NRPAPYSRPKQLPDK-WQHDLFDS-GF-----GGGAGVETGGKLLVSNLDFGVSDADIQE 123
Query: 221 LFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDAIAAVKKYNDVQLDGKPMKIEIVGNN 400
LFAE G LK+ VH+DRSGRS GTA+V + R+ DA+ A+K+YN V LDG+PM I++V +
Sbjct: 124 LFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTSQ 183
Query: 401 LQAASAPSGRHGSANFGGASSRRGGHGRGGQQRRGGGGGQGGRGG--GRGRRSGKGPTEK 574
+ P+ S N GG + RG G G GGG +G RGG GRGR +G+ ++
Sbjct: 184 IDTQRRPA---QSINRGGMTRNRGSGGFG-----GGGTRRGTRGGSRGRGRGTGRNSKQQ 235
Query: 575 VSAEDLDADLDKYH 616
+SAE+LDA LD Y+
Sbjct: 236 LSAEELDAQLDAYN 249
>sp|Q58EA2|THO4A_XENLA THO complex subunit 4-A OS=Xenopus laevis GN=thoc4-a PE=2
SV=1
Length = 256
Score = 161 bits (406), Expect = 6e-039
Identities = 89/193 (46%), Positives = 124/193 (64%), Gaps = 15/193 (7%)
Frame = +2
Query: 41 NRSAPYQSSAKAPESTWEHDMYSSEGFPSRSTRSSAGIETGTKLYISNLDYGVMNDDIKE 220
NR PY + P+ W+HD++ S GF + AG+ETG KL +SNLD+GV + DI+E
Sbjct: 72 NRPTPYSRPKQLPDK-WQHDLFDS-GF-----GAGAGMETGGKLLVSNLDFGVSDADIQE 124
Query: 221 LFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDAIAAVKKYNDVQLDGKPMKIEIVGNN 400
LFAE G LK+ VH+DRSGRS GTA+V + R+ DA+ A+K+YN V LDG+PM I++V +
Sbjct: 125 LFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTSQ 184
Query: 401 LQAASAPSGRHGSANFGGASSRRGGH-GRGGQQRRGGGGGQGGRGGGRGRRSGKGPTEKV 577
++A P + GG + RGG G RRG GG + GRGR +G+ P +++
Sbjct: 185 IEAQRRPI--QSQSRGGGVTRPRGGTLGFASGNRRGRGGNR-----GRGRGAGRNPKQQL 237
Query: 578 SAEDLDADLDKYH 616
SAE+LDA LD Y+
Sbjct: 238 SAEELDAQLDAYN 250
>sp|Q6GLW1|THO4B_XENLA THO complex subunit 4-B OS=Xenopus laevis GN=thoc4-b PE=2
SV=1
Length = 256
Score = 156 bits (393), Expect = 2e-037
Identities = 89/195 (45%), Positives = 124/195 (63%), Gaps = 16/195 (8%)
Frame = +2
Query: 41 NRSAPYQSSAKAPESTWEHDMYSSEGFPSRSTRSSAGIETGTKLYISNLDYGVMNDDIKE 220
NR PY + P+ W+HD++ S GF + AG+ETG KL +SNLD+GV + DI+E
Sbjct: 71 NRPTPYSRPKQLPDK-WQHDLFDS-GF-----GTGAGMETGGKLLVSNLDFGVSDADIQE 123
Query: 221 LFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDAIAAVKKYNDVQLDGKPMKIEIVGNN 400
LFAE G LK+ VH+DRSGRS GTA+V + R+ DA+ A+K+YN V LDG+ M I++V +
Sbjct: 124 LFAEFGSLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRSMNIQLVTSQ 183
Query: 401 LQAASAPSGRHGSANFGGASSRRGGHGRGGQQRRGGGGGQGGRGG--GRGRRSGKGPTEK 574
++A P S + GG +R RGG GG + RG GRGR +G+ P ++
Sbjct: 184 IEAQRRPI---QSQSRGGGVAR----PRGGAIGFAAGGNRRDRGANRGRGRGAGRNPKQQ 236
Query: 575 VSAEDLDADLDKYHA 619
+SAE+LDA LD Y+A
Sbjct: 237 LSAEELDAQLDAYNA 251
>sp|Q9JJW6|REFP2_MOUSE RNA and export factor-binding protein 2 OS=Mus musculus
GN=Refbp2 PE=1 SV=1
Length = 218
Score = 143 bits (360), Expect = 1e-033
Identities = 86/200 (43%), Positives = 115/200 (57%), Gaps = 23/200 (11%)
Frame = +2
Query: 5 GPIRRNNP---NRKSNRSAPYQSSAKAPESTWEHDMYSSEGFPSRSTRSSAGIETGTKLY 175
G RRN P NR APY P+ W+HD++ S G+ETG KL
Sbjct: 26 GGPRRNRPAIARGGRNRPAPYSRPKPLPDK-WQHDLFDS------GCGGGEGVETGAKLL 78
Query: 176 ISNLDYGVMNDDIKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDAIAAVKKYNDV 355
+SNLD+GV + DI+ELFAE G LK+ V +DRSGRS GTA+V + RR DA+ A+K+Y V
Sbjct: 79 VSNLDFGVSDADIQELFAEFGTLKKAAVDYDRSGRSLGTADVHFERRADALKAMKQYKGV 138
Query: 356 QLDGKPMKIEIVGNNLQAASAPSGRHGSANFGGASSRRGGHGRGGQQRRGGGGGQGGRGG 535
LDG+PM I++V + + P+ S N GG + RG G GG+ G GRG
Sbjct: 139 PLDGRPMDIQLVASQIDPQRRPA---QSGNRGGMTRSRGSGGFGGR-------GSQGRGR 188
Query: 536 GRGRRSGKGPTEKVSAEDLD 595
G GR S + +++SAE+LD
Sbjct: 189 GTGRNSKQ---QQLSAEELD 205
>sp|P19469|EGG2_SCHJA Eggshell protein 2A OS=Schistosoma japonicum GN=ESG-2A
PE=2 SV=1
Length = 207
Score = 57 bits (136), Expect = 1e-007
Identities = 24/45 (53%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Frame = +2
Query: 431 HGSANFGGASSRRGGHGRGGQQRRGGGGGQ-GGRGGGRGRRSGKG 562
+G+ +GG++ RR GHG+GG+ GGGGG+ GG+GGG G +GKG
Sbjct: 139 YGNDYYGGSNGRRNGHGKGGKGGNGGGGGKGGGKGGGNGEGNGKG 183
>sp|P04147|PABP_YEAST Polyadenylate-binding protein, cytoplasmic and nuclear
OS=Saccharomyces cerevisiae GN=PAB1 PE=1 SV=4
Length = 577
Score = 51 bits (120), Expect = 8e-006
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Frame = +2
Query: 125 SRSTRSSAGIETG---TKLYISNLDYGVMNDDIKELFAEVGELKRYTVHFDRSGRSKGTA 295
SR R S ET T LY+ N++ ++ +ELFA+ G + ++ D G+ KG
Sbjct: 203 SRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKLKGFG 262
Query: 296 EVVYSRRGDAIAAVKKYNDVQLDGKPMKI 382
V Y + DA+ AV+ ND +L+G+ + +
Sbjct: 263 FVNYEKHEDAVKAVEALNDSELNGEKLYV 291
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 200,168,264,886
Number of Sequences: 518415
Number of Extensions: 200168264886
Number of Successful Extensions: 1229695229
Number of sequences better than 0.0: 0
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