BLASTX 7.6.2
Query= UN55173 /QuerySize=749
(748 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q56X76|RH39_ARATH DEAD-box ATP-dependent RNA helicase 39 OS=A... 304 7e-082
sp|Q5VRY0|RH39_ORYSJ DEAD-box ATP-dependent RNA helicase 39 OS=O... 240 1e-062
sp|Q0DVX2|RH50_ORYSJ DEAD-box ATP-dependent RNA helicase 50 OS=O... 121 9e-027
sp|Q8GUG7|RH50_ARATH DEAD-box ATP-dependent RNA helicase 50 OS=A... 117 9e-026
sp|A4R8B5|HAS1_MAGGR ATP-dependent RNA helicase HAS1 OS=Magnapor... 104 8e-022
sp|Q4IEK8|HAS1_GIBZE ATP-dependent RNA helicase HAS1 OS=Gibberel... 101 9e-021
sp|Q09916|HAS1_SCHPO ATP-dependent RNA helicase has1 OS=Schizosa... 100 1e-020
sp|Q1EA54|HAS1_COCIM ATP-dependent RNA helicase HAS1 OS=Coccidio... 100 2e-020
sp|Q0V1Z7|DRS1_PHANO ATP-dependent RNA helicase DRS1 OS=Phaeosph... 97 8e-020
sp|Q8W4E1|RH47_ARATH DEAD-box ATP-dependent RNA helicase 47, mit... 97 1e-019
sp|Q10PV9|RH47B_ORYSJ DEAD-box ATP-dependent RNA helicase 47B OS... 91 6e-018
sp|Q4PEX7|DBP8_USTMA ATP-dependent RNA helicase DBP8 OS=Ustilago... 90 1e-017
sp|Q6H874|RH47A_ORYSJ DEAD-box ATP-dependent RNA helicase 47A OS... 87 8e-017
sp|Q9SW44|RH16_ARATH DEAD-box ATP-dependent RNA helicase 16 OS=A... 87 1e-016
sp|Q9C551|RH5_ARATH DEAD-box ATP-dependent RNA helicase 5 OS=Ara... 86 2e-016
sp|Q5KPU1|DBP8_CRYNE ATP-dependent RNA helicase DBP8 OS=Cryptoco... 81 6e-015
sp|Q9NQI0|DDX4_HUMAN Probable ATP-dependent RNA helicase DDX4 OS... 80 1e-014
sp|Q61496|DDX4_MOUSE Probable ATP-dependent RNA helicase DDX4 OS... 80 1e-014
sp|Q6GWX0|DDX4_PIG Probable ATP-dependent RNA helicase DDX4 OS=S... 80 1e-014
sp|Q64060|DDX4_RAT Probable ATP-dependent RNA helicase DDX4 OS=R... 80 1e-014
>sp|Q56X76|RH39_ARATH DEAD-box ATP-dependent RNA helicase 39 OS=Arabidopsis
thaliana GN=RH39 PE=2 SV=2
Length = 621
Score = 304 bits (776), Expect = 7e-082
Identities = 156/173 (90%), Positives = 165/173 (95%), Gaps = 2/173 (1%)
Frame = +2
Query: 143 PPQQRPSSVVVGIEEEQKSSNKKKKKMVESFEELGLSEEVMGALKEMNIEVPTEIQCIGV 322
PPQQRPSS VVG+EEE S KK KK+VE+F+ELGLSEEVMGAL+E+NIEVPTEIQCIG+
Sbjct: 86 PPQQRPSS-VVGVEEE-SSIRKKSKKLVENFQELGLSEEVMGALQELNIEVPTEIQCIGI 143
Query: 323 PAVMERKSVVLGSHTGSGKTLAYLLPIVQLMREDEATLGKITKPRRPRTVVLCPTRELSE 502
PAVMERKSVVLGSHTGSGKTLAYLLPIVQLMREDEA LGK TKPRRPRTVVLCPTRELSE
Sbjct: 144 PAVMERKSVVLGSHTGSGKTLAYLLPIVQLMREDEANLGKKTKPRRPRTVVLCPTRELSE 203
Query: 503 QVYRVAKSVSHHARFRSILVSGGSRIRPQEDSLNNAIDMVVGTPGRILQHIED 661
QVYRVAKS+SHHARFRSILVSGGSRIRPQEDSLNNAIDMVVGTPGRILQHIE+
Sbjct: 204 QVYRVAKSISHHARFRSILVSGGSRIRPQEDSLNNAIDMVVGTPGRILQHIEE 256
>sp|Q5VRY0|RH39_ORYSJ DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa
subsp. japonica GN=Os01g0184500 PE=2 SV=1
Length = 625
Score = 240 bits (610), Expect = 1e-062
Identities = 122/172 (70%), Positives = 138/172 (80%)
Frame = +2
Query: 146 PQQRPSSVVVGIEEEQKSSNKKKKKMVESFEELGLSEEVMGALKEMNIEVPTEIQCIGVP 325
P QR G Q+ K++ ++V+SFEELGL EEVM AL EM I PTEIQC+GVP
Sbjct: 83 PAQREKGRGGGGGGAQELQQKRRVEVVDSFEELGLGEEVMAALGEMGISKPTEIQCVGVP 142
Query: 326 AVMERKSVVLGSHTGSGKTLAYLLPIVQLMREDEATLGKITKPRRPRTVVLCPTRELSEQ 505
AV+ SVVLGSHTGSGKTLAYLLP+VQL+R DEA LG KPRRPR VVLCPTREL+EQ
Sbjct: 143 AVLAGTSVVLGSHTGSGKTLAYLLPLVQLLRRDEAMLGMSMKPRRPRAVVLCPTRELTEQ 202
Query: 506 VYRVAKSVSHHARFRSILVSGGSRIRPQEDSLNNAIDMVVGTPGRILQHIED 661
V+RVAKS+SHHARFRS +VSGGSRIRPQEDSLN +DMVVGTPGRIL HI+D
Sbjct: 203 VFRVAKSISHHARFRSTMVSGGSRIRPQEDSLNMPVDMVVGTPGRILDHIKD 254
>sp|Q0DVX2|RH50_ORYSJ DEAD-box ATP-dependent RNA helicase 50 OS=Oryza sativa
subsp. japonica GN=Os03g0108600 PE=2 SV=2
Length = 641
Score = 121 bits (301), Expect = 9e-027
Identities = 63/154 (40%), Positives = 97/154 (62%), Gaps = 1/154 (0%)
Frame = +2
Query: 230 SFEELGLSEEVMGALKEMNIEVPTEIQCIGVPAVMERKSVVLGSHTGSGKTLAYLLPIVQ 409
SF+E+G S+E++GAL+ P+ IQ + V+E KS ++G +GSGKTLAYL P+VQ
Sbjct: 241 SFKEIGCSDEILGALRSFGFPRPSHIQAMAYRPVLEGKSCIIGDQSGSGKTLAYLCPVVQ 300
Query: 410 LMREDEATLGKITKPRRPRTVVLCPTRELSEQVYRVAKSVSHH-ARFRSILVSGGSRIRP 586
+R++E + PR PR VVL PT EL+ QV +S+S FRS++ +GG R +
Sbjct: 301 NLRKEEVEGLHRSSPRNPRVVVLTPTAELASQVLNNCRSISKSGVPFRSMVATGGFRQKT 360
Query: 587 QEDSLNNAIDMVVGTPGRILQHIEDETWSMEILR 688
Q +SL+ +D+++ TPGR L +++ + LR
Sbjct: 361 QLESLDQELDVLIATPGRFLYLLQEGFVQLNNLR 394
>sp|Q8GUG7|RH50_ARATH DEAD-box ATP-dependent RNA helicase 50 OS=Arabidopsis
thaliana GN=RH50 PE=2 SV=2
Length = 781
Score = 117 bits (292), Expect = 9e-026
Identities = 61/155 (39%), Positives = 95/155 (61%), Gaps = 1/155 (0%)
Frame = +2
Query: 227 ESFEELGLSEEVMGALKEMNIEVPTEIQCIGVPAVMERKSVVLGSHTGSGKTLAYLLPIV 406
++F E+G SE++M ALKE N + P IQ + V++ KS ++ +GSGKTLAYL+P++
Sbjct: 374 KTFAEIGCSEDMMKALKEQNFDRPAHIQAMAFSPVIDGKSCIIADQSGSGKTLAYLVPVI 433
Query: 407 QLMREDEATLGKITKPRRPRTVVLCPTRELSEQVYRVAKSVSHH-ARFRSILVSGGSRIR 583
Q +RE+E + P PR +VL PT EL+ QV +S+S FRS++V+GG R R
Sbjct: 434 QRLREEELQGHSKSSPGCPRVIVLVPTAELASQVLANCRSISKSGVPFRSMVVTGGFRQR 493
Query: 584 PQEDSLNNAIDMVVGTPGRILQHIEDETWSMEILR 688
Q ++L +D+++ TPGR + + + LR
Sbjct: 494 TQLENLEQGVDVLIATPGRFTYLMNEGILGLSNLR 528
>sp|A4R8B5|HAS1_MAGGR ATP-dependent RNA helicase HAS1 OS=Magnaporthe grisea
GN=HAS1 PE=3 SV=2
Length = 587
Score = 104 bits (258), Expect = 8e-022
Identities = 57/156 (36%), Positives = 98/156 (62%), Gaps = 9/156 (5%)
Frame = +2
Query: 227 ESFEELGLSEEVMGALKEMNIEVPTEIQCIGVPAVMERKSVVLGSHTGSGKTLAYLLPIV 406
++F EL LSE M A++EM TEIQ G+P ++ K V+ + TGSGKTLA+L+P V
Sbjct: 112 QAFSELNLSENTMKAIEEMGFTKMTEIQRRGIPPLLAGKDVLGAAKTGSGKTLAFLIPAV 171
Query: 407 QLMREDEATLGKITKPRR-PRTVVLCPTRELSEQVYRVAKS-VSHHARFRSILVSGGSRI 580
+++R + KPR +V+ PTREL+ Q++ VA+ + HH++ I++ G +R
Sbjct: 172 EMLRSLK------FKPRNGTGVIVVSPTRELALQIFGVARDLMKHHSQTYGIVIGGANR- 224
Query: 581 RPQEDSLNNAIDMVVGTPGRILQHIEDETWSMEILR 688
R + + L+ +++++ TPGR+L H+++ + + LR
Sbjct: 225 RAEAEKLSKGVNLLIATPGRLLDHLQNTPFVFKNLR 260
>sp|Q4IEK8|HAS1_GIBZE ATP-dependent RNA helicase HAS1 OS=Gibberella zeae GN=HAS1
PE=3 SV=1
Length = 590
Score = 101 bits (249), Expect = 9e-021
Identities = 55/156 (35%), Positives = 97/156 (62%), Gaps = 9/156 (5%)
Frame = +2
Query: 227 ESFEELGLSEEVMGALKEMNIEVPTEIQCIGVPAVMERKSVVLGSHTGSGKTLAYLLPIV 406
+SFEEL LSE+ M A+ EM TEIQ G+P + + V+ + TGSGKTLA+L+P++
Sbjct: 115 QSFEELKLSEKTMKAINEMKFTKMTEIQRRGIPPSLAGRDVLGAAKTGSGKTLAFLIPVI 174
Query: 407 QLMREDEATLGKITKPRR-PRTVVLCPTRELSEQVYRVAKS-VSHHARFRSILVSGGSRI 580
+++ KPR +V+ PTREL+ Q++ VA+ ++HH++ I++ G +R
Sbjct: 175 EMLSSLR------FKPRNGTGVIVVSPTRELALQIFGVARELMAHHSQTYGIVIGGANR- 227
Query: 581 RPQEDSLNNAIDMVVGTPGRILQHIEDETWSMEILR 688
R + + L +++++ TPGR+L H+++ + + L+
Sbjct: 228 RAEAEKLAKGVNLLIATPGRLLDHLQNTPFVFKNLK 263
>sp|Q09916|HAS1_SCHPO ATP-dependent RNA helicase has1 OS=Schizosaccharomyces
pombe GN=has1 PE=1 SV=1
Length = 578
Score = 100 bits (248), Expect = 1e-020
Identities = 60/165 (36%), Positives = 94/165 (56%), Gaps = 13/165 (7%)
Frame = +2
Query: 182 EEEQKSSNKKKKKM--VESFEELGLSEEVMGALKEMNIEVPTEIQCIGVPAVMERKSVVL 355
E QKS N +E F +L LSE + A+KEM E TEIQ +P ++ + V+
Sbjct: 72 ERVQKSVNLNASSTSDIEKFSDLQLSENIQKAIKEMGFETMTEIQKRSIPPLLAGRDVLG 131
Query: 356 GSHTGSGKTLAYLLPIVQLMREDEATLGKITKPRR-PRTVVLCPTRELSEQVYRVAKSV- 529
+ TGSGKTLA+L+P ++++ KPR +++ PTREL+ Q++ VAK +
Sbjct: 132 AAKTGSGKTLAFLIPTIEML------YALKFKPRNGTGVIIISPTRELALQIFGVAKELL 185
Query: 530 -SHHARFRSILVSGGSRIRPQEDSLNNAIDMVVGTPGRILQHIED 661
HH F +V GG+ R + D L ++++V TPGR+L H+++
Sbjct: 186 KYHHQTFG--IVIGGANRRAEADKLVKGVNLLVATPGRLLDHLQN 228
>sp|Q1EA54|HAS1_COCIM ATP-dependent RNA helicase HAS1 OS=Coccidioides immitis
GN=HAS1 PE=3 SV=1
Length = 604
Score = 100 bits (247), Expect = 2e-020
Identities = 53/147 (36%), Positives = 93/147 (63%), Gaps = 9/147 (6%)
Frame = +2
Query: 227 ESFEELGLSEEVMGALKEMNIEVPTEIQCIGVPAVMERKSVVLGSHTGSGKTLAYLLPIV 406
+ F EL LSE+ + A++EM E TEIQ G+P +M + V+ + TGSGKTL++L+P V
Sbjct: 124 QKFTELNLSEKTLKAIQEMGFETMTEIQRRGIPPLMAGRDVLGAAKTGSGKTLSFLIPAV 183
Query: 407 QLMREDEATLGKITKPRR-PRTVVLCPTRELSEQVYRVAKS-VSHHARFRSILVSGGSRI 580
+++ KPR +V+ PTREL+ Q++ VA+ ++HH++ I++ G +R
Sbjct: 184 EMLS------ALRFKPRNGTGVIVVSPTRELALQIFGVARELMAHHSQTYGIVIGGANR- 236
Query: 581 RPQEDSLNNAIDMVVGTPGRILQHIED 661
R + + L +++++ TPGR+L H+++
Sbjct: 237 RAEAEKLTKGVNLLIATPGRLLDHLQN 263
>sp|Q0V1Z7|DRS1_PHANO ATP-dependent RNA helicase DRS1 OS=Phaeosphaeria nodorum
GN=DRS1 PE=3 SV=1
Length = 808
Score = 97 bits (241), Expect = 8e-020
Identities = 56/160 (35%), Positives = 80/160 (50%), Gaps = 6/160 (3%)
Frame = +2
Query: 182 EEEQKSSNKKKKKMVESFEELGLSEEVMGALKEMNIEVPTEIQCIGVPAVMERKSVVLGS 361
EE + KK K + SF + LS + L + PT IQ +P M+ K VV G+
Sbjct: 270 EESESGKKKKGAKSIGSFHAMSLSRPIQKGLAAIGFTEPTPIQAKAIPIAMQGKDVVGGA 329
Query: 362 HTGSGKTLAYLLPIVQLMREDEATLGKITKPRRPRTVVLCPTRELSEQVYRVAKSVSHHA 541
TGSGKT A+L+PI+ E L + K R + PTREL+ Q + VA ++
Sbjct: 330 ETGSGKTAAFLIPIL------ERLLYRPKKVPTTRVAIFMPTRELAVQCFNVATKLASFT 383
Query: 542 RFRSILVSGGSRIRPQEDSLNNAIDMVVGTPGRILQHIED 661
L++GG R QE L D+V+ TPGR + H+ +
Sbjct: 384 DITFALLAGGFSSREQEVMLKTRPDVVIATPGRFIDHMHN 423
>sp|Q8W4E1|RH47_ARATH DEAD-box ATP-dependent RNA helicase 47, mitochondrial
OS=Arabidopsis thaliana GN=RH47 PE=1 SV=2
Length = 551
Score = 97 bits (239), Expect = 1e-019
Identities = 55/147 (37%), Positives = 86/147 (58%), Gaps = 6/147 (4%)
Frame = +2
Query: 227 ESFEELGLSEEVMGALKEMNIEVPTEIQCIGVPAVMERKSVVLGSHTGSGKTLAYLLPIV 406
+SFEELGL + ++ +L+ VPT++Q VPA+++ V+ S+TGSGKTLAYLLPI+
Sbjct: 110 KSFEELGLPDSLLDSLEREGFSVPTDVQSAAVPAIIKGHDAVIQSYTGSGKTLAYLLPIL 169
Query: 407 Q----LMREDEATLGKITKPRRPRTVVLCPTRELSEQVYRVAKSV--SHHARFRSILVSG 568
L + ++ + K + +++ P+REL Q+ R + + H R LV G
Sbjct: 170 SEIGPLAEKSRSSHSENDKRTEIQAMIVAPSRELGMQIVREVEKLLGPVHRRMVQQLVGG 229
Query: 569 GSRIRPQEDSLNNAIDMVVGTPGRILQ 649
+R+R +E N +VVGTPGRI +
Sbjct: 230 ANRMRQEEALKKNKPAIVVGTPGRIAE 256
>sp|Q10PV9|RH47B_ORYSJ DEAD-box ATP-dependent RNA helicase 47B OS=Oryza sativa
subsp. japonica GN=Os03g0219700 PE=2 SV=1
Length = 573
Score = 91 bits (225), Expect = 6e-018
Identities = 63/205 (30%), Positives = 101/205 (49%), Gaps = 26/205 (12%)
Frame = +2
Query: 62 PSPSLPPSSPSPEPPLTSSHFSAPQTIPPQQRPSSVVVGIEEEQKSSNKKKKKMVESFEE 241
P PS S+ +P ++S + ++ P+ + I+E S+ +SFEE
Sbjct: 84 PKPSSRASALKVKPKVSSFNSKPAKSTLPKSAVVKKTLKIDESLFSA--------KSFEE 135
Query: 242 LGLSEEVMGALKEMNIEVPTEIQCIGVPAVMERKSVVLGSHTGSGKTLAYLLPIVQLMRE 421
LGL ++ L + + PTE+Q +P + ++ V+ S+TGSGKTLAYLLPI+
Sbjct: 136 LGLPPLLIDRLNKEGLSTPTEVQSAAIPIISQKHDAVIQSYTGSGKTLAYLLPIL----- 190
Query: 422 DEATLGKITKPRRP---------RTVVLCPTRELSEQVYRVAKSV--SHHARFRSILVSG 568
+ +G + +P V++ P+REL Q+ R + + + R LV G
Sbjct: 191 --SEIGPLKRPTEQDGSDKRSGVEAVIVAPSRELGMQIVREVEKILGPNDKRLVQQLVGG 248
Query: 569 GSRIRPQEDSLNNAIDMVVGTPGRI 643
+R R +E N +VVGTPGRI
Sbjct: 249 ANRSRQEEALKKNKPLIVVGTPGRI 273
>sp|Q4PEX7|DBP8_USTMA ATP-dependent RNA helicase DBP8 OS=Ustilago maydis GN=DBP8
PE=3 SV=1
Length = 602
Score = 90 bits (222), Expect = 1e-017
Identities = 68/204 (33%), Positives = 105/204 (51%), Gaps = 25/204 (12%)
Frame = +2
Query: 107 LTSSHF--SAPQ------TIPPQQRPSSVVVGIEEEQKSSNKKKKKMVESFEELGLSEEV 262
LT++H S PQ + P +S ++E KS++ K SF +G+S +
Sbjct: 63 LTANHARNSMPQVAASSSNVGPSSAAASSASHVQEVAKSASDPPKH--TSFSSIGISPML 120
Query: 263 MGALKEMNIEVPTEIQCIGVPAVMERKSVVLGSHTGSGKTLAYLLPIVQLMREDEATLGK 442
+ +L + I+VPT IQ + +P+V+E + +V G+ TGSGKTL + LPI+ + +D +G
Sbjct: 121 IRSLASLQIKVPTPIQSLTIPSVLEGRDLVGGAQTGSGKTLCFALPILNKLIKD--MVGG 178
Query: 443 ITKPRRPRTVVLCPTRELSEQVYRVAKSVSHHAR--FRSILVSGGSRIRPQEDSLNN-AI 613
VVL PTREL Q++ +V AR R LV GG + Q L N
Sbjct: 179 F-------AVVLTPTRELGVQLHEQFVAVGEGARMGLRCALVLGGMDMMKQASELANLRP 231
Query: 614 DMVVGTPGRILQHIED---ETWSM 676
++V TPGR++ H+ E W +
Sbjct: 232 HVIVATPGRLVDHLRSGGGEEWGL 255
>sp|Q6H874|RH47A_ORYSJ DEAD-box ATP-dependent RNA helicase 47A OS=Oryza sativa
subsp. japonica GN=Os02g0636300 PE=2 SV=1
Length = 573
Score = 87 bits (215), Expect = 8e-017
Identities = 52/143 (36%), Positives = 80/143 (55%), Gaps = 4/143 (2%)
Frame = +2
Query: 227 ESFEELGLSEEVMGALKEMNIEVPTEIQCIGVPAVMERKSVVLGSHTGSGKTLAYLLPIV 406
+SFEELGL ++ L + + PTE+Q +P + ++ V+ S+TGSGKTLAYLLPI+
Sbjct: 131 KSFEELGLPPLLIDRLNKEGLTAPTEVQSAAIPIISQKHDAVIQSYTGSGKTLAYLLPIL 190
Query: 407 QLMREDEATLGKITKPRRP--RTVVLCPTRELSEQVYRVAKSV--SHHARFRSILVSGGS 574
+ + + + +R V++ P+REL Q+ R + + + R LV G +
Sbjct: 191 SEIGPLKRPTEQDSSDKRSGVEAVIVAPSRELGMQIVREVEKILGPNDKRLVQQLVGGAN 250
Query: 575 RIRPQEDSLNNAIDMVVGTPGRI 643
R R +E N +VVGTPGRI
Sbjct: 251 RSRQEEALKKNKPIIVVGTPGRI 273
>sp|Q9SW44|RH16_ARATH DEAD-box ATP-dependent RNA helicase 16 OS=Arabidopsis
thaliana GN=RH16 PE=2 SV=1
Length = 626
Score = 87 bits (214), Expect = 1e-016
Identities = 53/156 (33%), Positives = 86/156 (55%), Gaps = 7/156 (4%)
Frame = +2
Query: 185 EEQKSSNKKKKKMVESFEELGLSEEVMGALKEMNIEVPTEIQCIGVPAVMERKSVVLGSH 364
+ ++ +K+++ +SFEELGL ++ AL + IE PT IQ +P ++E K VV +
Sbjct: 32 DREQEEEQKEEEAPKSFEELGLDSRLIRALTKKGIEKPTLIQQSAIPYILEGKDVVARAK 91
Query: 365 TGSGKTLAYLLPIVQ-LMREDEATLGKITKPRRPRTVVLCPTRELSEQVYRVAKSVSHHA 541
TGSGKTLAYLLP++Q L D + K+ P +L P+REL +QVY S+
Sbjct: 92 TGSGKTLAYLLPLLQKLFSADSVSKKKLA----PSAFILVPSRELCQQVYTEVSSLIELC 147
Query: 542 R--FRSILVSGGSRIRPQEDSLNNAIDMVVGTPGRI 643
R +++ ++ ++L +++V TP I
Sbjct: 148 RVQLKAVQLTSSMSASDMRNALAGLPEILVSTPACI 183
>sp|Q9C551|RH5_ARATH DEAD-box ATP-dependent RNA helicase 5 OS=Arabidopsis
thaliana GN=RH5 PE=1 SV=1
Length = 537
Score = 86 bits (211), Expect = 2e-016
Identities = 51/155 (32%), Positives = 83/155 (53%), Gaps = 2/155 (1%)
Frame = +2
Query: 194 KSSNKKKKKMVESFEELGLSEEVMGALKEMNIEVPTEIQCIGVPAVMERKSVVLGSHTGS 373
K + K +++F E L E V+ K E P+ IQ P +++ + ++ + TGS
Sbjct: 105 KGVEEAKYAALKTFAESNLPENVLDCCK--TFEKPSPIQSHTWPFLLDGRDLIGIAKTGS 162
Query: 374 GKTLAYLLPIVQLMREDEATLGKITKPRRPRTVVLCPTRELSEQVYRVAKSVSHHARFRS 553
GKTLA+ +P + + + +G +K P +VL PTREL+ Q+ V + +S
Sbjct: 163 GKTLAFGIPAIMHVLKKNKKIGGGSKKVNPTCLVLSPTRELAVQISDVLREAGEPCGLKS 222
Query: 554 ILVSGGSRIRPQEDSLNNAIDMVVGTPGRILQHIE 658
I V GGS PQ ++ + +D+V+GTPGR+ IE
Sbjct: 223 ICVYGGSSKGPQISAIRSGVDIVIGTPGRLRDLIE 257
>sp|Q5KPU1|DBP8_CRYNE ATP-dependent RNA helicase DBP8 OS=Cryptococcus neoformans
GN=DBP8 PE=3 SV=1
Length = 619
Score = 81 bits (199), Expect = 6e-015
Identities = 61/201 (30%), Positives = 89/201 (44%), Gaps = 15/201 (7%)
Frame = +2
Query: 41 ELREQSSPSPSLPPSSPSPEPPLTSSHFSAPQTIPPQQRPSSVVVGIEEEQKSSNKKKKK 220
E E S P PS + S A + + P+ R G+ K S
Sbjct: 96 EGEEDKENEESEPRPQPSSGAGMLSRTALATKDMTPKPRSKPQPNGLASASKPSAD---- 151
Query: 221 MVESFEELGLSEEVMGALKEMNIEVPTEIQCIGVPAVMERKSVVLGSHTGSGKTLAYLLP 400
+FE LGLS ++ AL +NI+ PTEIQ V ++ + + G+ TGSGKT+A+ LP
Sbjct: 152 --VTFESLGLSHPLITALASINIKKPTEIQAACVEPILSGRDCIGGAKTGSGKTMAFALP 209
Query: 401 IVQLMREDEATLGKITKPRRPRTVVLCPTRELSEQVYRVAKSVSHHARFRSILVSGGSRI 580
IV+ + D P VVL PTREL+ Q+ + + + GG +
Sbjct: 210 IVERIARD---------PFGVWAVVLTPTRELAYQLSEQFLVIGKPLGLTTATIVGGMDM 260
Query: 581 RPQEDSLNNAIDMVVGTPGRI 643
Q L ++V TPGR+
Sbjct: 261 MKQAQELEARPHIIVATPGRL 281
>sp|Q9NQI0|DDX4_HUMAN Probable ATP-dependent RNA helicase DDX4 OS=Homo sapiens
GN=DDX4 PE=2 SV=2
Length = 724
Score = 80 bits (197), Expect = 1e-014
Identities = 49/192 (25%), Positives = 92/192 (47%), Gaps = 6/192 (3%)
Frame = +2
Query: 89 PSPEPPLTSSHFSAPQTIPPQQRPSSVVVGIEEEQKSSNKKKKKMVESFEELGLSEEVMG 268
P P P S F+ QT + +++V + S + +FEE L + +
Sbjct: 248 PPPPPEDEDSIFAHYQTGINFDKYDTILVEV------SGHDAPPAILTFEEANLCQTLNN 301
Query: 269 ALKEMNIEVPTEIQCIGVPAVMERKSVVLGSHTGSGKTLAYLLPIVQLMREDEATLGKIT 448
+ + T +Q +P ++ + ++ + TGSGKT A+LLPI+ M D T +
Sbjct: 302 NIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDGITASRFK 361
Query: 449 KPRRPRTVVLCPTRELSEQVYRVAKSVSHHARFRSILVSGGSRIRPQEDSLNNAIDMVVG 628
+ + P +++ PTREL Q+Y A+ S R++++ GG+++ + +++
Sbjct: 362 ELQEPECIIVAPTRELVNQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCA 421
Query: 629 TPGRILQHIEDE 664
TPGR++ I E
Sbjct: 422 TPGRLMDIIGKE 433
>sp|Q61496|DDX4_MOUSE Probable ATP-dependent RNA helicase DDX4 OS=Mus musculus
GN=Ddx4 PE=1 SV=2
Length = 702
Score = 80 bits (197), Expect = 1e-014
Identities = 50/192 (26%), Positives = 91/192 (47%), Gaps = 6/192 (3%)
Frame = +2
Query: 89 PSPEPPLTSSHFSAPQTIPPQQRPSSVVVGIEEEQKSSNKKKKKMVESFEELGLSEEVMG 268
P P P S F+ QT + +++V + S + +FEE L + +
Sbjct: 221 PPPPPEDEDSIFAHYQTGINFDKYDTILVEV------SGHDAPPAILTFEEANLCQTLNN 274
Query: 269 ALKEMNIEVPTEIQCIGVPAVMERKSVVLGSHTGSGKTLAYLLPIVQLMREDEATLGKIT 448
+ + T +Q +P V+ + ++ + TGSGKT A+LLPI+ M D T +
Sbjct: 275 NIAKAGYTKLTPVQKYSIPIVLAGRDLMACAQTGSGKTAAFLLPILAHMMRDGITASRFK 334
Query: 449 KPRRPRTVVLCPTRELSEQVYRVAKSVSHHARFRSILVSGGSRIRPQEDSLNNAIDMVVG 628
+ + P +++ PTREL Q+Y A+ S R++++ GG++ + +++
Sbjct: 335 ELQEPECIIVAPTRELINQIYLEARKFSFGTCVRAVVIYGGTQFGHSVRQIVQGCNILCA 394
Query: 629 TPGRILQHIEDE 664
TPGR++ I E
Sbjct: 395 TPGRLMDIIGKE 406
>sp|Q6GWX0|DDX4_PIG Probable ATP-dependent RNA helicase DDX4 OS=Sus scrofa
GN=DDX4 PE=2 SV=1
Length = 722
Score = 80 bits (197), Expect = 1e-014
Identities = 49/192 (25%), Positives = 92/192 (47%), Gaps = 6/192 (3%)
Frame = +2
Query: 89 PSPEPPLTSSHFSAPQTIPPQQRPSSVVVGIEEEQKSSNKKKKKMVESFEELGLSEEVMG 268
P P P S F+ QT + +++V + S + +FEE L + +
Sbjct: 246 PPPPPEDEDSIFAHYQTGINFDKYDTILVEV------SGHDAPPAILTFEEANLCQTLNN 299
Query: 269 ALKEMNIEVPTEIQCIGVPAVMERKSVVLGSHTGSGKTLAYLLPIVQLMREDEATLGKIT 448
+ + T +Q +P ++ + ++ + TGSGKT A+LLPI+ M D T +
Sbjct: 300 NIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDGITASRFK 359
Query: 449 KPRRPRTVVLCPTRELSEQVYRVAKSVSHHARFRSILVSGGSRIRPQEDSLNNAIDMVVG 628
+ + P +++ PTREL Q+Y A+ S R++++ GG+++ + +++
Sbjct: 360 ELQEPECIIVAPTRELVNQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCA 419
Query: 629 TPGRILQHIEDE 664
TPGR++ I E
Sbjct: 420 TPGRLMDIIGKE 431
>sp|Q64060|DDX4_RAT Probable ATP-dependent RNA helicase DDX4 OS=Rattus
norvegicus GN=Ddx4 PE=2 SV=1
Length = 713
Score = 80 bits (196), Expect = 1e-014
Identities = 50/192 (26%), Positives = 91/192 (47%), Gaps = 6/192 (3%)
Frame = +2
Query: 89 PSPEPPLTSSHFSAPQTIPPQQRPSSVVVGIEEEQKSSNKKKKKMVESFEELGLSEEVMG 268
P P P S F+ QT + +++V + S + +FEE L + +
Sbjct: 233 PPPPPEDEDSIFAHYQTGINFDKYDTILVEV------SGHDAPPAILTFEEANLCQTLNN 286
Query: 269 ALKEMNIEVPTEIQCIGVPAVMERKSVVLGSHTGSGKTLAYLLPIVQLMREDEATLGKIT 448
+ + T +Q +P V+ + ++ + TGSGKT A+LLPI+ M D T +
Sbjct: 287 NIAKAGYTKLTPVQKYSIPIVLAGRDLMACAQTGSGKTAAFLLPILAHMMRDGITASRFK 346
Query: 449 KPRRPRTVVLCPTRELSEQVYRVAKSVSHHARFRSILVSGGSRIRPQEDSLNNAIDMVVG 628
+ + P +++ PTREL Q+Y A+ S R++++ GG++ + +++
Sbjct: 347 ELQEPECIIVAPTRELINQIYLEARKFSFGTCVRAVVIYGGTQFGHSIRQIVQGCNILCA 406
Query: 629 TPGRILQHIEDE 664
TPGR++ I E
Sbjct: 407 TPGRLMDIIGKE 418
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 200,168,264,886
Number of Sequences: 518415
Number of Extensions: 200168264886
Number of Successful Extensions: 1229695229
Number of sequences better than 0.0: 0
|
