BLASTX 7.6.2
Query= UN55173 /QuerySize=749
(748 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G09730.1 | Symbols: | DEAD/DEAH box helicase,... 304 7e-083
TAIR9_protein||AT3G06980.1 | Symbols: | DEAD/DEAH box helicase,... 117 9e-027
TAIR9_protein||AT5G65900.1 | Symbols: | DEAD/DEAH box helicase,... 98 4e-021
TAIR9_protein||AT1G12770.1 | Symbols: EMB1586 | EMB1586 (embryo ... 97 1e-020
TAIR9_protein||AT3G18600.1 | Symbols: | DEAD/DEAH box helicase,... 94 6e-020
TAIR9_protein||AT2G47330.1 | Symbols: | DEAD/DEAH box helicase,... 92 4e-019
TAIR9_protein||AT2G42520.1 | Symbols: | DEAD box RNA helicase, ... 89 3e-018
TAIR9_protein||AT1G71370.1 | Symbols: | DEAD/DEAH box helicase,... 88 4e-018
TAIR9_protein||AT4G34910.1 | Symbols: | DEAD/DEAH box helicase,... 87 1e-017
TAIR9_protein||AT5G51280.1 | Symbols: | DEAD-box protein abstra... 87 1e-017
TAIR9_protein||AT1G31970.1 | Symbols: STRS1 | STRS1 (STRESS RESP... 86 2e-017
TAIR9_protein||AT4G16630.1 | Symbols: | DEAD/DEAH box helicase,... 83 2e-016
TAIR9_protein||AT3G02065.2 | Symbols: | DEAD/DEAH box helicase ... 82 3e-016
TAIR9_protein||AT3G09620.1 | Symbols: | DEAD/DEAH box helicase,... 81 5e-016
TAIR9_protein||AT1G20920.1 | Symbols: | DEAD box RNA helicase, ... 81 7e-016
TAIR9_protein||AT1G20920.2 | Symbols: | DEAD box RNA helicase, ... 81 7e-016
TAIR9_protein||AT3G58510.1 | Symbols: | DEAD box RNA helicase, ... 80 9e-016
TAIR9_protein||AT3G58510.2 | Symbols: | DEAD box RNA helicase, ... 80 9e-016
TAIR9_protein||AT3G58510.3 | Symbols: | DEAD box RNA helicase, ... 80 9e-016
TAIR9_protein||AT3G58570.1 | Symbols: | DEAD box RNA helicase, ... 79 3e-015
>TAIR9_protein||AT4G09730.1 | Symbols: | DEAD/DEAH box helicase, putative |
chr4:6136333-6139510 FORWARD
Length = 622
Score = 304 bits (776), Expect = 7e-083
Identities = 156/173 (90%), Positives = 165/173 (95%), Gaps = 2/173 (1%)
Frame = +2
Query: 143 PPQQRPSSVVVGIEEEQKSSNKKKKKMVESFEELGLSEEVMGALKEMNIEVPTEIQCIGV 322
PPQQRPSS VVG+EEE S KK KK+VE+F+ELGLSEEVMGAL+E+NIEVPTEIQCIG+
Sbjct: 86 PPQQRPSS-VVGVEEE-SSIRKKSKKLVENFQELGLSEEVMGALQELNIEVPTEIQCIGI 143
Query: 323 PAVMERKSVVLGSHTGSGKTLAYLLPIVQLMREDEATLGKITKPRRPRTVVLCPTRELSE 502
PAVMERKSVVLGSHTGSGKTLAYLLPIVQLMREDEA LGK TKPRRPRTVVLCPTRELSE
Sbjct: 144 PAVMERKSVVLGSHTGSGKTLAYLLPIVQLMREDEANLGKKTKPRRPRTVVLCPTRELSE 203
Query: 503 QVYRVAKSVSHHARFRSILVSGGSRIRPQEDSLNNAIDMVVGTPGRILQHIED 661
QVYRVAKS+SHHARFRSILVSGGSRIRPQEDSLNNAIDMVVGTPGRILQHIE+
Sbjct: 204 QVYRVAKSISHHARFRSILVSGGSRIRPQEDSLNNAIDMVVGTPGRILQHIEE 256
>TAIR9_protein||AT3G06980.1 | Symbols: | DEAD/DEAH box helicase, putative |
chr3:2201531-2204662 FORWARD
Length = 782
Score = 117 bits (292), Expect = 9e-027
Identities = 61/155 (39%), Positives = 95/155 (61%), Gaps = 1/155 (0%)
Frame = +2
Query: 227 ESFEELGLSEEVMGALKEMNIEVPTEIQCIGVPAVMERKSVVLGSHTGSGKTLAYLLPIV 406
++F E+G SE++M ALKE N + P IQ + V++ KS ++ +GSGKTLAYL+P++
Sbjct: 374 KTFAEIGCSEDMMKALKEQNFDRPAHIQAMAFSPVIDGKSCIIADQSGSGKTLAYLVPVI 433
Query: 407 QLMREDEATLGKITKPRRPRTVVLCPTRELSEQVYRVAKSVSHH-ARFRSILVSGGSRIR 583
Q +RE+E + P PR +VL PT EL+ QV +S+S FRS++V+GG R R
Sbjct: 434 QRLREEELQGHSKSSPGCPRVIVLVPTAELASQVLANCRSISKSGVPFRSMVVTGGFRQR 493
Query: 584 PQEDSLNNAIDMVVGTPGRILQHIEDETWSMEILR 688
Q ++L +D+++ TPGR + + + LR
Sbjct: 494 TQLENLEQGVDVLIATPGRFTYLMNEGILGLSNLR 528
>TAIR9_protein||AT5G65900.1 | Symbols: | DEAD/DEAH box helicase, putative |
chr5:26358328-26361244 FORWARD
Length = 634
Score = 98 bits (243), Expect = 4e-021
Identities = 58/167 (34%), Positives = 93/167 (55%), Gaps = 12/167 (7%)
Frame = +2
Query: 182 EEEQKSSNKKKKKMVE-------SFEELGLSEEVMGALKEMNIEVPTEIQCIGVPAVMER 340
EEE+ +++KK+ E +FE L LS+ ++KEM T+IQ +P +M
Sbjct: 132 EEEEVEDKEEEKKLEETSIMTNKTFESLSLSDNTYKSIKEMGFARMTQIQAKAIPPLMMG 191
Query: 341 KSVVLGSHTGSGKTLAYLLPIVQLMREDEATLGKITKPRRPRTVVLCPTRELSEQVYRVA 520
+ V+ + TGSGKTLA+L+P V+L+ K T +V+CPTREL+ Q Y VA
Sbjct: 192 EDVLGAARTGSGKTLAFLIPAVELLYR-----VKFTPRNGTGVLVICPTRELAIQSYGVA 246
Query: 521 KSVSHHARFRSILVSGGSRIRPQEDSLNNAIDMVVGTPGRILQHIED 661
K + + V GG + + + + L ++++V TPGR+L H+E+
Sbjct: 247 KELLKYHSQTVGKVIGGEKRKTEAEILAKGVNLLVATPGRLLDHLEN 293
>TAIR9_protein||AT1G12770.1 | Symbols: EMB1586 | EMB1586 (embryo defective
1586); ATP binding / ATP-dependent helicase/ helicase/ nucleic acid
binding | chr1:4351888-4353543 FORWARD
Length = 552
Score = 97 bits (239), Expect = 1e-020
Identities = 55/147 (37%), Positives = 86/147 (58%), Gaps = 6/147 (4%)
Frame = +2
Query: 227 ESFEELGLSEEVMGALKEMNIEVPTEIQCIGVPAVMERKSVVLGSHTGSGKTLAYLLPIV 406
+SFEELGL + ++ +L+ VPT++Q VPA+++ V+ S+TGSGKTLAYLLPI+
Sbjct: 110 KSFEELGLPDSLLDSLEREGFSVPTDVQSAAVPAIIKGHDAVIQSYTGSGKTLAYLLPIL 169
Query: 407 Q----LMREDEATLGKITKPRRPRTVVLCPTRELSEQVYRVAKSV--SHHARFRSILVSG 568
L + ++ + K + +++ P+REL Q+ R + + H R LV G
Sbjct: 170 SEIGPLAEKSRSSHSENDKRTEIQAMIVAPSRELGMQIVREVEKLLGPVHRRMVQQLVGG 229
Query: 569 GSRIRPQEDSLNNAIDMVVGTPGRILQ 649
+R+R +E N +VVGTPGRI +
Sbjct: 230 ANRMRQEEALKKNKPAIVVGTPGRIAE 256
>TAIR9_protein||AT3G18600.1 | Symbols: | DEAD/DEAH box helicase, putative |
chr3:6399724-6403007 REVERSE
Length = 569
Score = 94 bits (233), Expect = 6e-020
Identities = 50/145 (34%), Positives = 90/145 (62%), Gaps = 7/145 (4%)
Frame = +2
Query: 230 SFEELGLSEEVMGALKEMNIEVPTEIQCIGVPAVMERKSVVLGSHTGSGKTLAYLLPIVQ 409
+F+ L LSE+ A+KEM + T+IQ + ++E K V+ + TGSGKTLA+L+P V+
Sbjct: 90 TFDSLDLSEQTSIAIKEMGFQYMTQIQAGSIQPLLEGKDVLGAARTGSGKTLAFLIPAVE 149
Query: 410 LMREDEATLGKITKPRRPRTVVLCPTRELSEQVYRVAKS-VSHHARFRSILVSGGSRIRP 586
L+ ++ + + +V+CPTREL+ Q VA+ + HH++ S+++ G +R R
Sbjct: 150 LLFKE-----RFSPRNGTGVIVICPTRELAIQTKNVAEELLKHHSQTVSMVIGGNNR-RS 203
Query: 587 QEDSLNNAIDMVVGTPGRILQHIED 661
+ + + ++V+ TPGR+L H+++
Sbjct: 204 EAQRIASGSNLVIATPGRLLDHLQN 228
>TAIR9_protein||AT2G47330.1 | Symbols: | DEAD/DEAH box helicase, putative |
chr2:19429083-19431617 REVERSE
Length = 761
Score = 92 bits (226), Expect = 4e-019
Identities = 54/152 (35%), Positives = 84/152 (55%), Gaps = 6/152 (3%)
Frame = +2
Query: 224 VESFEELGLSEEVMGALKEMNIEVPTEIQCIGVPAVMERKSVVLGSHTGSGKTLAYLLP- 400
V++FE+ G S ++M A+K+ E PT IQC +P V+ + V+ + TGSGKT A++LP
Sbjct: 227 VKTFEDCGFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPM 286
Query: 401 IVQLMREDEATLGKITKPRRPRTVVLCPTRELSEQVYRVAKSVSHHARFRSILVSGGSRI 580
IV +M + E + + P V+ PTREL+ Q++ AK S R V GG
Sbjct: 287 IVHIMDQPE-----LQRDEGPIGVICAPTRELAHQIFLEAKKFSKAYGLRVSAVYGGMSK 341
Query: 581 RPQEDSLNNAIDMVVGTPGRILQHIEDETWSM 676
Q L ++VV TPGR++ ++ + +M
Sbjct: 342 HEQFKELKAGCEIVVATPGRLIDMLKMKALTM 373
>TAIR9_protein||AT2G42520.1 | Symbols: | DEAD box RNA helicase, putative |
chr2:17705382-17708744 FORWARD
Length = 634
Score = 89 bits (219), Expect = 3e-018
Identities = 51/164 (31%), Positives = 88/164 (53%), Gaps = 9/164 (5%)
Frame = +2
Query: 224 VESFEELGLSEEVMGALKEMNIEVPTEIQCIGVPAVMERKSVVLGSHTGSGKTLAYLLPI 403
V +F E+ L E + ++ PT +Q +P ++E + ++ + TGSGKT A+ PI
Sbjct: 158 VNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPILLEGRDLMACAQTGSGKTAAFCFPI 217
Query: 404 VQLMREDEATLGKITKPRRPRT-----VVLCPTRELSEQVYRVAKSVSHHARFRSILVSG 568
+ + +D+ + +PR RT V+L PTREL+ Q++ AK S+ + ++ G
Sbjct: 218 ISGIMKDQ----HVQRPRGSRTVYPLAVILSPTRELASQIHDEAKKFSYQTGVKVVVAYG 273
Query: 569 GSRIRPQEDSLNNAIDMVVGTPGRILQHIEDETWSMEILRIWCL 700
G+ I Q L +D++V TPGR+ +E SM+++R L
Sbjct: 274 GTPINQQLRELERGVDILVATPGRLNDLLERARVSMQMIRFLAL 317
>TAIR9_protein||AT1G71370.1 | Symbols: | DEAD/DEAH box helicase, putative |
chr1:26897235-26899381 REVERSE
Length = 559
Score = 88 bits (217), Expect = 4e-018
Identities = 55/153 (35%), Positives = 87/153 (56%), Gaps = 7/153 (4%)
Frame = +2
Query: 197 SSNKKKKKMVESFEEL--GLSEEVMGALKEMNIEVPTEIQCIGVPAVMERKSVVLGSHTG 370
S K K + F EL LSE+++ AL EV T +Q +P + K VV+ + TG
Sbjct: 4 SPPKTITKALPRFSELKPPLSEDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATG 63
Query: 371 SGKTLAYLLPIVQLMREDEATLGKITKPRRPRTVVLCPTRELSEQVYRVAKS-VSHHARF 547
SGKTLA+LLP ++++R + KP + V++ PTRELS Q+++VA+ VS
Sbjct: 64 SGKTLAFLLPFIEIIRRSNS---YPPKPHQVMGVIISPTRELSAQIHKVAEPFVSTLPNV 120
Query: 548 RSILVSGGSRIRPQEDSL-NNAIDMVVGTPGRI 643
S+L+ GG + ++L ++++GTPGR+
Sbjct: 121 NSVLLVGGREVEADMNTLEEEGANLLIGTPGRL 153
>TAIR9_protein||AT4G34910.1 | Symbols: | DEAD/DEAH box helicase, putative
(RH16) | chr4:16631661-16634834 FORWARD
Length = 627
Score = 87 bits (214), Expect = 1e-017
Identities = 53/156 (33%), Positives = 86/156 (55%), Gaps = 7/156 (4%)
Frame = +2
Query: 185 EEQKSSNKKKKKMVESFEELGLSEEVMGALKEMNIEVPTEIQCIGVPAVMERKSVVLGSH 364
+ ++ +K+++ +SFEELGL ++ AL + IE PT IQ +P ++E K VV +
Sbjct: 32 DREQEEEQKEEEAPKSFEELGLDSRLIRALTKKGIEKPTLIQQSAIPYILEGKDVVARAK 91
Query: 365 TGSGKTLAYLLPIVQ-LMREDEATLGKITKPRRPRTVVLCPTRELSEQVYRVAKSVSHHA 541
TGSGKTLAYLLP++Q L D + K+ P +L P+REL +QVY S+
Sbjct: 92 TGSGKTLAYLLPLLQKLFSADSVSKKKLA----PSAFILVPSRELCQQVYTEVSSLIELC 147
Query: 542 R--FRSILVSGGSRIRPQEDSLNNAIDMVVGTPGRI 643
R +++ ++ ++L +++V TP I
Sbjct: 148 RVQLKAVQLTSSMSASDMRNALAGLPEILVSTPACI 183
>TAIR9_protein||AT5G51280.1 | Symbols: | DEAD-box protein abstrakt, putative |
chr5:20841456-20843645 FORWARD
Length = 592
Score = 87 bits (214), Expect = 1e-017
Identities = 47/161 (29%), Positives = 88/161 (54%), Gaps = 7/161 (4%)
Frame = +2
Query: 224 VESFEELGLSEEVMGALKEMNIEVPTEIQCIGVPAVMERKSVVLGSHTGSGKTLAYLLPI 403
+++F+++ V+ LKE I PT IQ G+P ++ + ++ + TGSGKTL ++LP+
Sbjct: 145 IKNFKDMKFPRPVLDTLKEKGIVQPTPIQVQGLPVILAGRDMIGIAFTGSGKTLVFVLPM 204
Query: 404 VQLMREDEATLGKITKPRRPRTVVLCPTRELSEQVYRVAKSV------SHHARFRSILVS 565
+ + ++E + I P +++CP+REL+ Q Y V + + + RS+L
Sbjct: 205 IMIALQEEMMM-PIAAGEGPIGLIVCPSRELARQTYEVVEQFVAPLVEAGYPPLRSLLCI 263
Query: 566 GGSRIRPQEDSLNNAIDMVVGTPGRILQHIEDETWSMEILR 688
GG +R Q + + + +VV TPGR+ + + S++ R
Sbjct: 264 GGIDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMSLDACR 304
>TAIR9_protein||AT1G31970.1 | Symbols: STRS1 | STRS1 (STRESS RESPONSE SUPPRESSOR
1); ATP binding / ATP-dependent helicase/ helicase/ nucleic acid
binding | chr1:11479921-11482707 FORWARD
Length = 538
Score = 86 bits (211), Expect = 2e-017
Identities = 51/155 (32%), Positives = 83/155 (53%), Gaps = 2/155 (1%)
Frame = +2
Query: 194 KSSNKKKKKMVESFEELGLSEEVMGALKEMNIEVPTEIQCIGVPAVMERKSVVLGSHTGS 373
K + K +++F E L E V+ K E P+ IQ P +++ + ++ + TGS
Sbjct: 105 KGVEEAKYAALKTFAESNLPENVLDCCK--TFEKPSPIQSHTWPFLLDGRDLIGIAKTGS 162
Query: 374 GKTLAYLLPIVQLMREDEATLGKITKPRRPRTVVLCPTRELSEQVYRVAKSVSHHARFRS 553
GKTLA+ +P + + + +G +K P +VL PTREL+ Q+ V + +S
Sbjct: 163 GKTLAFGIPAIMHVLKKNKKIGGGSKKVNPTCLVLSPTRELAVQISDVLREAGEPCGLKS 222
Query: 554 ILVSGGSRIRPQEDSLNNAIDMVVGTPGRILQHIE 658
I V GGS PQ ++ + +D+V+GTPGR+ IE
Sbjct: 223 ICVYGGSSKGPQISAIRSGVDIVIGTPGRLRDLIE 257
>TAIR9_protein||AT4G16630.1 | Symbols: | DEAD/DEAH box helicase, putative
(RH28) | chr4:9362176-9366449 REVERSE
Length = 790
Score = 83 bits (203), Expect = 2e-016
Identities = 45/148 (30%), Positives = 83/148 (56%), Gaps = 12/148 (8%)
Frame = +2
Query: 227 ESFEELGLSEEVMGALKEMNIEVPTEIQCIGVPAVMERKSVVLGSHTGSGKTLAYLLPIV 406
++F EL LS ++ A + + + PT IQ +P + + + + TGSGKT A+ LP +
Sbjct: 167 DTFMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTL 226
Query: 407 QLMREDEATLGKITKPRR---PRTVVLCPTRELSEQVYRVAKSVSHHARFRSILVSGGSR 577
+ + + +P+R R ++L PTREL+ Q++ + ++++ + L+ GG
Sbjct: 227 ERL---------LFRPKRVFATRVLILTPTRELAVQIHSMIQNLAQFTDIKCGLIVGGLS 277
Query: 578 IRPQEDSLNNAIDMVVGTPGRILQHIED 661
+R QE L + D+VV TPGR++ H+ +
Sbjct: 278 VREQEVVLRSMPDIVVATPGRMIDHLRN 305
>TAIR9_protein||AT3G02065.2 | Symbols: | DEAD/DEAH box helicase family protein
| chr3:359136-360734 FORWARD
Length = 506
Score = 82 bits (201), Expect = 3e-016
Identities = 48/159 (30%), Positives = 83/159 (52%), Gaps = 1/159 (0%)
Frame = +2
Query: 224 VESFEELGLSEEVMGALKEMNIEVPTEIQCIGVPAVMERKSVVLGSHTGSGKTLAYLLPI 403
V +F GL +++ L+ + PT IQ +PA + KS++ + TGSGKT ++L+PI
Sbjct: 109 VLTFTSCGLPPKLLLNLETAGYDFPTPIQMQAIPAALTGKSLLASADTGSGKTASFLVPI 168
Query: 404 VQLMREDEATLGKITKPRRPRTVVLCPTRELSEQVYRVAKSVSHHARFRSILVSGGSRIR 583
+ + + R P +VL PTREL QV AK + F++ LV GG +
Sbjct: 169 ISRCTTYHSE-HPSDQRRNPLAMVLAPTRELCVQVEDQAKMLGKGLPFKTALVVGGDPMS 227
Query: 584 PQEDSLNNAIDMVVGTPGRILQHIEDETWSMEILRIWCL 700
Q + +++++GTPGR++ + T ++ + + L
Sbjct: 228 GQLYRIQQGVELIIGTPGRVVDLLSKHTIELDNIMTFVL 266
>TAIR9_protein||AT3G09620.1 | Symbols: | DEAD/DEAH box helicase, putative |
chr3:2949152-2952205 REVERSE
Length = 990
Score = 81 bits (199), Expect = 5e-016
Identities = 46/155 (29%), Positives = 82/155 (52%), Gaps = 4/155 (2%)
Frame = +2
Query: 182 EEEQKSSNKKKKKMVESFEELGLSEEVMGALKEMNIEVPTEIQCIGVPAVMERKSVVLGS 361
E E K K + ++ + + GL+ +++ LK++N E P IQ +P +M + + +
Sbjct: 381 ELELKVHGKDVPRPIQFWHQTGLTSKILDTLKKLNYEKPMPIQAQALPIIMSGRDCIGVA 440
Query: 362 HTGSGKTLAYLLPIVQLMREDEATLGKITKPRRPRTVVLCPTRELSEQVYRVAKSVSHHA 541
TGSGKTL ++LP+++ +++ + P +V+ PTREL +Q+Y + S
Sbjct: 441 KTGSGKTLGFVLPMLRHIKDQP----PVEAGDGPIGLVMAPTRELVQQIYSDIRKFSKAL 496
Query: 542 RFRSILVSGGSRIRPQEDSLNNAIDMVVGTPGRIL 646
+ V GGS + Q L ++VV TPGR++
Sbjct: 497 GIICVPVYGGSGVAQQISELKRGTEIVVCTPGRMI 531
>TAIR9_protein||AT1G20920.1 | Symbols: | DEAD box RNA helicase, putative |
chr1:7285342-7288842 FORWARD
Length = 1167
Score = 81 bits (198), Expect = 7e-016
Identities = 45/155 (29%), Positives = 83/155 (53%), Gaps = 4/155 (2%)
Frame = +2
Query: 182 EEEQKSSNKKKKKMVESFEELGLSEEVMGALKEMNIEVPTEIQCIGVPAVMERKSVVLGS 361
E E K K + ++ + + GL+ +++ +K++N E P IQ +P +M + + +
Sbjct: 514 ELELKVHGKDVPRPIKFWHQTGLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVA 573
Query: 362 HTGSGKTLAYLLPIVQLMREDEATLGKITKPRRPRTVVLCPTRELSEQVYRVAKSVSHHA 541
TGSGKTL ++LP+++ +++ + P +V+ PTREL +Q++ + S
Sbjct: 574 KTGSGKTLGFVLPMLRHIKDQP----PVEAGDGPIGLVMAPTRELVQQIHSDIRKFSKPL 629
Query: 542 RFRSILVSGGSRIRPQEDSLNNAIDMVVGTPGRIL 646
R + V GGS + Q L ++VV TPGR++
Sbjct: 630 GIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMI 664
>TAIR9_protein||AT1G20920.2 | Symbols: | DEAD box RNA helicase, putative |
chr1:7286356-7288842 FORWARD
Length = 829
Score = 81 bits (198), Expect = 7e-016
Identities = 45/155 (29%), Positives = 83/155 (53%), Gaps = 4/155 (2%)
Frame = +2
Query: 182 EEEQKSSNKKKKKMVESFEELGLSEEVMGALKEMNIEVPTEIQCIGVPAVMERKSVVLGS 361
E E K K + ++ + + GL+ +++ +K++N E P IQ +P +M + + +
Sbjct: 176 ELELKVHGKDVPRPIKFWHQTGLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVA 235
Query: 362 HTGSGKTLAYLLPIVQLMREDEATLGKITKPRRPRTVVLCPTRELSEQVYRVAKSVSHHA 541
TGSGKTL ++LP+++ +++ + P +V+ PTREL +Q++ + S
Sbjct: 236 KTGSGKTLGFVLPMLRHIKDQP----PVEAGDGPIGLVMAPTRELVQQIHSDIRKFSKPL 291
Query: 542 RFRSILVSGGSRIRPQEDSLNNAIDMVVGTPGRIL 646
R + V GGS + Q L ++VV TPGR++
Sbjct: 292 GIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMI 326
>TAIR9_protein||AT3G58510.1 | Symbols: | DEAD box RNA helicase, putative (RH11)
| chr3:21640608-21643464 FORWARD
Length = 613
Score = 80 bits (197), Expect = 9e-016
Identities = 45/160 (28%), Positives = 84/160 (52%), Gaps = 1/160 (0%)
Frame = +2
Query: 224 VESFEELGLSEEVMGALKEMNIEVPTEIQCIGVPAVMERKSVVLGSHTGSGKTLAYLLPI 403
V +F ++ L + + ++ PT +Q +P ++ + ++ + TGSGKT A+ PI
Sbjct: 150 VNTFADIDLGDALNLNIRRCKYVRPTPVQRHAIPILLAERDLMACAQTGSGKTAAFCFPI 209
Query: 404 VQ-LMREDEATLGKITKPRRPRTVVLCPTRELSEQVYRVAKSVSHHARFRSILVSGGSRI 580
+ +M++ + ++ P V+L PTREL+ Q++ AK S+ + ++ GG+ I
Sbjct: 210 ISGIMKDQHVERPRGSRAVYPFAVILSPTRELACQIHDEAKKFSYQTGVKVVVAYGGTPI 269
Query: 581 RPQEDSLNNAIDMVVGTPGRILQHIEDETWSMEILRIWCL 700
Q L D++V TPGR+ +E SM+++R L
Sbjct: 270 HQQLRELERGCDILVATPGRLNDLLERARVSMQMIRFLAL 309
>TAIR9_protein||AT3G58510.2 | Symbols: | DEAD box RNA helicase, putative (RH11)
| chr3:21640608-21643464 FORWARD
Length = 613
Score = 80 bits (197), Expect = 9e-016
Identities = 45/160 (28%), Positives = 84/160 (52%), Gaps = 1/160 (0%)
Frame = +2
Query: 224 VESFEELGLSEEVMGALKEMNIEVPTEIQCIGVPAVMERKSVVLGSHTGSGKTLAYLLPI 403
V +F ++ L + + ++ PT +Q +P ++ + ++ + TGSGKT A+ PI
Sbjct: 150 VNTFADIDLGDALNLNIRRCKYVRPTPVQRHAIPILLAERDLMACAQTGSGKTAAFCFPI 209
Query: 404 VQ-LMREDEATLGKITKPRRPRTVVLCPTRELSEQVYRVAKSVSHHARFRSILVSGGSRI 580
+ +M++ + ++ P V+L PTREL+ Q++ AK S+ + ++ GG+ I
Sbjct: 210 ISGIMKDQHVERPRGSRAVYPFAVILSPTRELACQIHDEAKKFSYQTGVKVVVAYGGTPI 269
Query: 581 RPQEDSLNNAIDMVVGTPGRILQHIEDETWSMEILRIWCL 700
Q L D++V TPGR+ +E SM+++R L
Sbjct: 270 HQQLRELERGCDILVATPGRLNDLLERARVSMQMIRFLAL 309
>TAIR9_protein||AT3G58510.3 | Symbols: | DEAD box RNA helicase, putative (RH11)
| chr3:21640608-21643464 FORWARD
Length = 613
Score = 80 bits (197), Expect = 9e-016
Identities = 45/160 (28%), Positives = 84/160 (52%), Gaps = 1/160 (0%)
Frame = +2
Query: 224 VESFEELGLSEEVMGALKEMNIEVPTEIQCIGVPAVMERKSVVLGSHTGSGKTLAYLLPI 403
V +F ++ L + + ++ PT +Q +P ++ + ++ + TGSGKT A+ PI
Sbjct: 150 VNTFADIDLGDALNLNIRRCKYVRPTPVQRHAIPILLAERDLMACAQTGSGKTAAFCFPI 209
Query: 404 VQ-LMREDEATLGKITKPRRPRTVVLCPTRELSEQVYRVAKSVSHHARFRSILVSGGSRI 580
+ +M++ + ++ P V+L PTREL+ Q++ AK S+ + ++ GG+ I
Sbjct: 210 ISGIMKDQHVERPRGSRAVYPFAVILSPTRELACQIHDEAKKFSYQTGVKVVVAYGGTPI 269
Query: 581 RPQEDSLNNAIDMVVGTPGRILQHIEDETWSMEILRIWCL 700
Q L D++V TPGR+ +E SM+++R L
Sbjct: 270 HQQLRELERGCDILVATPGRLNDLLERARVSMQMIRFLAL 309
>TAIR9_protein||AT3G58570.1 | Symbols: | DEAD box RNA helicase, putative |
chr3:21657099-21660352 FORWARD
Length = 647
Score = 79 bits (193), Expect = 3e-015
Identities = 47/164 (28%), Positives = 85/164 (51%), Gaps = 9/164 (5%)
Frame = +2
Query: 224 VESFEELGLSEEVMGALKEMNIEVPTEIQCIGVPAVMERKSVVLGSHTGSGKTLAYLLPI 403
V +F E+ L E + ++ PT +Q +P + + ++ + TGSGKT A+ PI
Sbjct: 145 VNTFAEIDLGEALNLNIQRCKYVKPTPVQRNAIPILAAGRDLMACAQTGSGKTAAFCFPI 204
Query: 404 VQLMREDEATLGKITKPR-----RPRTVVLCPTRELSEQVYRVAKSVSHHARFRSILVSG 568
+ + +D+ I +PR P V+L PTREL+ Q++ A+ S+ + ++ G
Sbjct: 205 ISGIMKDQ----HIERPRGVRGVYPLAVILSPTRELACQIHDEARKFSYQTGVKVVVAYG 260
Query: 569 GSRIRPQEDSLNNAIDMVVGTPGRILQHIEDETWSMEILRIWCL 700
G+ + Q L +D++V TPGR+ +E S++++R L
Sbjct: 261 GTPVNQQIRELERGVDILVATPGRLNDLLERGRVSLQMVRFLAL 304
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,626,273,657
Number of Sequences: 33410
Number of Extensions: 25626273657
Number of Successful Extensions: 814999693
Number of sequences better than 0.0: 0
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