BLASTX 7.6.2
Query= UN55193 /QuerySize=759
(758 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G26990.1 | Symbols: | FUNCTIONS IN: molecular... 269 1e-072
>TAIR9_protein||AT3G26990.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF618 (InterPro:IPR006903), Regulation of nuclear
pre-mRNA protein (InterPro:IPR006569), ENTH/VHS (InterPro:IPR008942);
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G10060.1); Has 815 Blast hits to 806 proteins in 138 species:
Archae - 0; Bacteria - 10; Metazoa - 490; Fungi - 159; Plants - 81;
Viruses - 1; Other Eukaryotes - 74 (source: NCBI BLink). |
chr3:9948426-9951557 REVERSE
Length = 514
Score = 269 bits (687), Expect = 1e-072
Identities = 153/222 (68%), Positives = 173/222 (77%), Gaps = 28/222 (12%)
Frame = +3
Query: 150 QLARFQSDRTGDLCKQLINHGSSSHPPAT-EEESKEVVKVSFTA-------------SAP 287
Q+ARFQSDRTGDLC+QL++HG SS PPAT EEESKEV+KVS TA SAP
Sbjct: 263 QIARFQSDRTGDLCRQLLDHGGSSQPPATEEEESKEVIKVSSTAAAPQSFTHSDVEQSAP 322
Query: 288 VMFASNPPTQSVVVDPRKTEAAAMVAKLTASTSSAEMLSYVLSSFASEGIIG-NNPPTVT 464
VMFASN PTQS + DPRKT AAA+VAKLTASTSSAEMLSYVLSS ASEGIIG NNPP VT
Sbjct: 323 VMFASN-PTQS-LEDPRKTAAAAVVAKLTASTSSAEMLSYVLSSLASEGIIGNNNPPAVT 380
Query: 465 ETPPSDAYPPEKRPKLQNLDQSYL---QQNTSSATTSPP----PPPPAFQLQPQFLQPLQ 623
ET S +PPEKRPKLQN DQSYL QNT++ ++S P PPPP FQLQPQFLQPLQ
Sbjct: 381 ETLSSVDFPPEKRPKLQNHDQSYLSPHHQNTATTSSSTPPQPLPPPPPFQLQPQFLQPLQ 440
Query: 624 PPGPVNSTPFSYSI----ATTQQQQQQQGPWILGSPRFNTSA 737
PPGPVN TPF+Y+I ATTQQQQQ+QGPW+ G + +T++
Sbjct: 441 PPGPVNHTPFNYTIATSTATTQQQQQEQGPWVPGLTQLSTTS 482
Score = 96 bits (236), Expect = 3e-020
Identities = 47/76 (61%), Positives = 57/76 (75%), Gaps = 6/76 (7%)
Frame = +3
Query: 546 TSSATTSPPPPPPAFQLQPQFLQPLQPPGPVNSTPFSYSI----ATTQQQQQQQGPWILG 713
+SS P PPPP FQLQPQFLQPLQPPGPVN TPF+Y+I ATTQQQQQ+QGPW+ G
Sbjct: 415 SSSTPPQPLPPPPPFQLQPQFLQPLQPPGPVNHTPFNYTIATSTATTQQQQQEQGPWVPG 474
Query: 714 SPRFNTSA--HQISYQ 755
+ +T++ + SYQ
Sbjct: 475 LTQLSTTSAPSENSYQ 490
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,626,273,657
Number of Sequences: 33410
Number of Extensions: 25626273657
Number of Successful Extensions: 814999693
Number of sequences better than 0.0: 0
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