BLASTX 7.6.2
Query= UN55228 /QuerySize=334
(333 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G15280.1 | Symbols: | glycine-rich protein | ... 78 7e-016
TAIR9_protein||AT1G15280.2 | Symbols: | glycine-rich protein | ... 78 7e-016
TAIR9_protein||AT1G80000.1 | Symbols: | FUNCTIONS IN: molecular... 60 3e-010
TAIR9_protein||AT1G80000.2 | Symbols: | FUNCTIONS IN: molecular... 60 3e-010
TAIR9_protein||AT2G34300.1 | Symbols: | dehydration-responsive ... 45 7e-006
TAIR9_protein||AT2G34300.2 | Symbols: | dehydration-responsive ... 45 7e-006
>TAIR9_protein||AT1G15280.1 | Symbols: | glycine-rich protein |
chr1:5252538-5256214 FORWARD
Length = 585
Score = 78 bits (191), Expect = 7e-016
Identities = 45/81 (55%), Positives = 55/81 (67%), Gaps = 6/81 (7%)
Frame = +1
Query: 85 TGEPEYESDPEELKRSLATRRREASDDEEEDDVSGGGGEGIKNRRAEIDSDADQSDEQDG 264
T E EYESDPEEL RSLATRRREASDD+ +DD +KN+RA +DSD SDE+ G
Sbjct: 3 TSEAEYESDPEELNRSLATRRREASDDDSDDD---DAVRDVKNQRAVVDSDL--SDEEVG 57
Query: 265 AAVENDNDENKSDDGEESYDE 327
V+ DNDE+ D E+ +E
Sbjct: 58 -TVKYDNDEDGEDSYEDDEEE 77
>TAIR9_protein||AT1G15280.2 | Symbols: | glycine-rich protein |
chr1:5252538-5256214 FORWARD
Length = 586
Score = 78 bits (191), Expect = 7e-016
Identities = 45/81 (55%), Positives = 55/81 (67%), Gaps = 6/81 (7%)
Frame = +1
Query: 85 TGEPEYESDPEELKRSLATRRREASDDEEEDDVSGGGGEGIKNRRAEIDSDADQSDEQDG 264
T E EYESDPEEL RSLATRRREASDD+ +DD +KN+RA +DSD SDE+ G
Sbjct: 3 TSEAEYESDPEELNRSLATRRREASDDDSDDD---DAVRDVKNQRAVVDSDL--SDEEVG 57
Query: 265 AAVENDNDENKSDDGEESYDE 327
V+ DNDE+ D E+ +E
Sbjct: 58 -TVKYDNDEDGEDSYEDDEEE 77
>TAIR9_protein||AT1G80000.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s:
CASC3/Barentsz eIF4AIII binding (InterPro:IPR018545); BEST Arabidopsis
thaliana protein match is: glycine-rich protein (TAIR:AT1G15280.2); Has
2243 Blast hits to 1704 proteins in 212 species: Archae - 16; Bacteria
- 151; Metazoa - 691; Fungi - 281; Plants - 163; Viruses - 64; Other
Eukaryotes - 877 (source: NCBI BLink). | chr1:30093195-30096742
FORWARD
Length = 606
Score = 60 bits (143), Expect = 3e-010
Identities = 35/91 (38%), Positives = 55/91 (60%), Gaps = 14/91 (15%)
Frame = +1
Query: 70 MASADTGEPEYESDPEELKRSLATRRREASDDEEEDDVSGGGGEGIKNRRAEIDSDADQ- 246
MA + +YESDP+EL RSLATRRREASDD+E+D+ + + RA I +D+
Sbjct: 1 MAPDGVEDSDYESDPDELNRSLATRRREASDDDEDDEEA----DDHDKLRAAIQIHSDEH 56
Query: 247 -------SDEQDGAAVEND--NDENKSDDGE 312
SD+ +G +E+ +D+++ +DG+
Sbjct: 57 SGVVVVDSDDNEGLHIEDSYGDDDDEEEDGD 87
>TAIR9_protein||AT1G80000.2 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s:
CASC3/Barentsz eIF4AIII binding (InterPro:IPR018545); BEST Arabidopsis
thaliana protein match is: glycine-rich protein (TAIR:AT1G15280.2); Has
2243 Blast hits to 1704 proteins in 212 species: Archae - 16; Bacteria
- 151; Metazoa - 691; Fungi - 281; Plants - 163; Viruses - 64; Other
Eukaryotes - 877 (source: NCBI BLink). | chr1:30093195-30096742
FORWARD
Length = 606
Score = 60 bits (143), Expect = 3e-010
Identities = 35/91 (38%), Positives = 55/91 (60%), Gaps = 14/91 (15%)
Frame = +1
Query: 70 MASADTGEPEYESDPEELKRSLATRRREASDDEEEDDVSGGGGEGIKNRRAEIDSDADQ- 246
MA + +YESDP+EL RSLATRRREASDD+E+D+ + + RA I +D+
Sbjct: 1 MAPDGVEDSDYESDPDELNRSLATRRREASDDDEDDEEA----DDHDKLRAAIQIHSDEH 56
Query: 247 -------SDEQDGAAVEND--NDENKSDDGE 312
SD+ +G +E+ +D+++ +DG+
Sbjct: 57 SGVVVVDSDDNEGLHIEDSYGDDDDEEEDGD 87
>TAIR9_protein||AT2G34300.1 | Symbols: | dehydration-responsive protein-related
| chr2:14473916-14476811 REVERSE
Length = 771
Score = 45 bits (105), Expect = 7e-006
Identities = 19/64 (29%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Frame = +1
Query: 145 RREASDDEEEDDVSGGGGEGIKNRRA-EIDSDADQSDEQDGAAVENDNDENKSDDGEESY 321
+ EA ++ +E D + G G+G K + E+ S++D++ +++ +E +ENKS+DG +
Sbjct: 113 KTEAGEERKESDDNNGDGDGEKEKNVKEVGSESDETTQKEKTQLEESTEENKSEDGNGNE 172
Query: 322 DEEE 333
++ E
Sbjct: 173 EKAE 176
>TAIR9_protein||AT2G34300.2 | Symbols: | dehydration-responsive protein-related
| chr2:14473916-14476811 REVERSE
Length = 771
Score = 45 bits (105), Expect = 7e-006
Identities = 19/64 (29%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Frame = +1
Query: 145 RREASDDEEEDDVSGGGGEGIKNRRA-EIDSDADQSDEQDGAAVENDNDENKSDDGEESY 321
+ EA ++ +E D + G G+G K + E+ S++D++ +++ +E +ENKS+DG +
Sbjct: 113 KTEAGEERKESDDNNGDGDGEKEKNVKEVGSESDETTQKEKTQLEESTEENKSEDGNGNE 172
Query: 322 DEEE 333
++ E
Sbjct: 173 EKAE 176
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,716,350,672
Number of Sequences: 33410
Number of Extensions: 25716350672
Number of Successful Extensions: 820181838
Number of sequences better than 0.0: 0
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