BLASTX 7.6.2
Query= UN55229 /QuerySize=818
(817 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297847156|ref|XP_002891459.1| predicted protein [Arabidopsis ... 142 7e-032
gi|297834772|ref|XP_002885268.1| hypothetical protein ARALYDRAFT... 133 4e-029
gi|15230154|ref|NP_188494.1| zinc finger CCCH domain-containing ... 84 2e-014
gi|224095950|ref|XP_002310510.1| predicted protein [Populus tric... 66 6e-009
gi|255573447|ref|XP_002527649.1| hypothetical protein RCOM_12781... 62 7e-008
gi|224083424|ref|XP_002307020.1| predicted protein [Populus tric... 61 2e-007
>gi|297847156|ref|XP_002891459.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 735
Score = 142 bits (357), Expect = 7e-032
Identities = 76/127 (59%), Positives = 92/127 (72%), Gaps = 21/127 (16%)
Frame = +3
Query: 390 SDTGKSSEEAKGNNGNWIDDMEMSPDWNYGVKTLKKPLNGE-------------KDSLAP 530
S K EAKGNN +WIDDMEMSPDWNYGVKTLKKP+N E KD+LAP
Sbjct: 336 SRVSKGMSEAKGNNSSWIDDMEMSPDWNYGVKTLKKPVNEEHGGVSQSSQSQVLKDALAP 395
Query: 531 SYEHGSAEEVMSQQVGDRRSIGMFPSVGEKTVASSHHGFSN---NSAPPIQAFSQ---IQ 692
+YEHG+A ++QQ G++R+IGMF +VGEKTVAS+HH FSN NSAPP+QAFSQ
Sbjct: 396 AYEHGAA--AIAQQDGNQRNIGMFSTVGEKTVASTHHNFSNNLANSAPPVQAFSQNIENH 453
Query: 693 SALPHQT 713
SA+P+Q+
Sbjct: 454 SAVPYQS 460
Score = 90 bits (222), Expect = 3e-016
Identities = 45/77 (58%), Positives = 55/77 (71%), Gaps = 5/77 (6%)
Frame = +3
Query: 159 RSEDNNNNSRRETQRRDVSEREYNRISNVPCRYFALGN--CRNGTSCRFSHHG---ARTS 323
RS N RE QRRDV E E++R SNVPCR+FA G+ CRNG +CRFSHHG AR S
Sbjct: 229 RSHRNEFAREREMQRRDVPEGEFHRSSNVPCRFFASGSGYCRNGNNCRFSHHGAPSARGS 288
Query: 324 PGRKPQDEMFGRHDNNH 374
P RKPQ+E++ R +NN+
Sbjct: 289 PERKPQNEIYSRQENNN 305
Score = 89 bits (219), Expect = 7e-016
Identities = 46/71 (64%), Positives = 55/71 (77%), Gaps = 8/71 (11%)
Frame = +3
Query: 3 SRHKTRSGREVDGRYNKAGGDHDWEPKNRKTRDTSYYKEEDSREQSPLRVGGRSE----- 167
+R RSGRE DGRYN+A GD+DWE KNRKTRDT+YY EDSREQ P+RVGGR++
Sbjct: 155 ARVSPRSGREFDGRYNRA-GDYDWEAKNRKTRDTNYY-TEDSREQQPMRVGGRTDYSSDF 212
Query: 168 -DNNNNSRRET 197
+ N+NSRRET
Sbjct: 213 LEENHNSRRET 223
>gi|297834772|ref|XP_002885268.1| hypothetical protein ARALYDRAFT_898233
[Arabidopsis lyrata subsp. lyrata]
Length = 685
Score = 133 bits (333), Expect = 4e-029
Identities = 89/235 (37%), Positives = 131/235 (55%), Gaps = 39/235 (16%)
Frame = +3
Query: 111 YKEEDSREQSPLRVGG-----RSEDNNNNSRRETQRR-DVSEREYNRISNVPCRYFALGN 272
Y E++SR + + GG R + +ETQRR E ++R SN+PC++FA G
Sbjct: 177 YPEDNSRREH-VNDGGLDPRMRRHRSEFMGEKETQRRGGDGEGGFHRSSNIPCKFFAAGT 235
Query: 273 --CRNGTSCRFSHHGARTSPGRKPQDEMFGRHD-NNH-----RWN----------GRSDT 398
CRNG CRFSHH + ++PQD F R D NH +WN GR +
Sbjct: 236 GFCRNGNYCRFSHH---VADRKQPQDNNFYRQDKKNHSSGHNKWNDVERLDNGRVGRIED 292
Query: 399 GKSSE---EAKGNNGNWIDDMEMSPDWNYGVKTLKKPLNGEK--DSLAPSYEHGSAEEVM 563
++S+ E+KGN +WI DMEMSPDWNYGV+ LKKP+ E + PS + ++ +
Sbjct: 293 SRASKGVSESKGNGSSWIGDMEMSPDWNYGVQALKKPVKEEHGVGIIGPSSQSRVLKDDL 352
Query: 564 SQQVGDRRSIGMF----PSVGEKTVASSHHGFSNN-SAPPIQAFSQIQSALPHQT 713
D+R+ GMF ++ EK +A+SH +SN+ + P+QAF+Q + LP+Q+
Sbjct: 353 VTNY-DQRNSGMFSHGDKTMAEKPIAASHQSYSNSVNVAPVQAFNQNHNVLPYQS 406
>gi|15230154|ref|NP_188494.1| zinc finger CCCH domain-containing protein 38
[Arabidopsis thaliana]
Length = 676
Score = 84 bits (206), Expect = 2e-014
Identities = 48/110 (43%), Positives = 69/110 (62%), Gaps = 11/110 (10%)
Frame = +3
Query: 402 KSSEEAKGN-NGNWIDDMEMSPDWNYGVKTLKKPLNGEKDSLAPSYEHGSAEEVMSQQVG 578
K E+KGN + +WIDDMEMSPDWNYGV+ LKKP+ ++D S V+
Sbjct: 292 KGVSESKGNGSSSWIDDMEMSPDWNYGVQALKKPV--KEDHSVGIIGQSSQSRVLKD--- 346
Query: 579 DRRSIGMFP----SVGEKTVASSHHGFSNN-SAPPIQAFSQIQSALPHQT 713
D+RS GMF ++ EK VA+SH +SN+ + P++ F+Q +ALP+Q+
Sbjct: 347 DQRSSGMFSHGGRTMAEKPVAASHQSYSNSVNVAPVETFNQNHNALPYQS 396
>gi|224095950|ref|XP_002310510.1| predicted protein [Populus trichocarpa]
Length = 934
Score = 66 bits (159), Expect = 6e-009
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 7/123 (5%)
Frame = +3
Query: 105 SYYKEEDSREQSPLRVGGRSEDNNNNSRRETQRRDVSEREYNRISNVPCRYFALGNCRNG 284
+++ D + G R DN+ R + R +ERE R +++PC++FA GNCRNG
Sbjct: 265 AHHGASDPSSRGSANDGIRERDNDRRHRYASPERR-AERETRRAADIPCKFFAAGNCRNG 323
Query: 285 TSCRFSHHGARTSPGRKPQDEMFGRHDNNHRWNGRSDTGKSSEEAKGNNGNWIDDMEMSP 464
CRFSH+ SP ++ +D + N+ D KS + K + + D ++S
Sbjct: 324 KYCRFSHNDQTPSPDKRSRDGRWPPSQNS------DDVEKSWNDPKWSESHTSDAAKLSE 377
Query: 465 DWN 473
+ N
Sbjct: 378 NKN 380
>gi|255573447|ref|XP_002527649.1| hypothetical protein RCOM_1278130 [Ricinus
communis]
Length = 886
Score = 62 bits (150), Expect = 7e-008
Identities = 33/90 (36%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Frame = +3
Query: 165 EDNNNNSRRETQRRDVSEREYNRISNVPCRYFALGNCRNGTSCRFSHHGARTSPGRKPQD 344
E N++ R+ +RE R ++VPC++FA GNCRNG CRFSH G + +D
Sbjct: 261 ERNSDRRHRDASPERHGDREIRRPADVPCKFFAAGNCRNGKYCRFSHQGQALLSPERSRD 320
Query: 345 EMFGRHDNN-----HRWNGRSDTGKSSEEA 419
F HD N WNG + S+ +A
Sbjct: 321 GRFS-HDQNADDIEKVWNGPKWSSTSTTDA 349
>gi|224083424|ref|XP_002307020.1| predicted protein [Populus trichocarpa]
Length = 858
Score = 61 bits (147), Expect = 2e-007
Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 7/104 (6%)
Frame = +3
Query: 165 EDNNNNSRRETQRRDVSEREYNRISNVPCRYFALGNCRNGTSCRFSHHG-ARTSPGRKPQ 341
E +N+ RR +ERE +R +++PC++FA GNC+NG CRFSHH SP ++ +
Sbjct: 260 ERDNDRRRRYASPERRAERETSRAADIPCKFFAAGNCQNGKYCRFSHHDQTLASPDKRSR 319
Query: 342 DEMFGRHDNNHRWNGRSDTGKSSEEAKGNNGNWIDDMEMSPDWN 473
D + N+ + KS + K ++ + D + S D N
Sbjct: 320 DVRWPPSQNS------DELEKSWKGPKWSDSHTSDSAKFSEDKN 357
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,766,393,936,687
Number of Sequences: 15229318
Number of Extensions: 5766393936687
Number of Successful Extensions: 1363926624
Number of sequences better than 0.0: 0
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