BLASTX 7.6.2
Query= UN55566 /QuerySize=748
(747 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|18483290|gb|AAL73988.1|AF466153_1 DYAD [Arabidopsis thaliana] 221 1e-055
gi|30696040|ref|NP_568757.2| protein SWITCH1 (protein DYAD) [Ara... 221 1e-055
gi|16033414|gb|AAL13233.1| SWITCH1 splice variant S [Arabidopsis... 221 1e-055
gi|297795939|ref|XP_002865854.1| hypothetical protein ARALYDRAFT... 213 2e-053
>gi|18483290|gb|AAL73988.1|AF466153_1 DYAD [Arabidopsis thaliana]
Length = 635
Score = 221 bits (561), Expect = 1e-055
Identities = 127/199 (63%), Positives = 143/199 (71%), Gaps = 24/199 (12%)
Frame = -2
Query: 689 NSCVTTQNVDQDNMMPLAKEIYADLLKKKYKIEDQLVIIAETLHKMEEDMGWLQKTVDGN 510
NSCVT+QN DN+M AKEIYADLLKKKYKIEDQLVII ETL KMEEDMGWL+KTVD N
Sbjct: 445 NSCVTSQN---DNLMTPAKEIYADLLKKKYKIEDQLVIIGETLRKMEEDMGWLKKTVDEN 501
Query: 509 CPRKPDSIETPLLLEDSPMMKTPE-------EVNNETEFPQ---KGR------RSPLSLI 378
P+KPDS ETPLLLEDSP ++T E + N TE PQ KGR RSPLSLI
Sbjct: 502 YPKKPDSTETPLLLEDSPPIQTLEGEVKVVNKGNQITESPQNREKGRKHDQQERSPLSLI 561
Query: 377 NNTGFRICRPVASFSWPNLPALAAATDTDEIASLPSPNRPSRSSTTCPVKPFAAKRPLFL 198
+NTGFRICRPV F+WP LPALAAATDT + SP+ + PVKP AAKRPL L
Sbjct: 562 SNTGFRICRPVGMFAWPQLPALAAATDT----NASSPSHRQAYPSPFPVKPLAAKRPLGL 617
Query: 197 PFPFTATPPDQAPLNLFSL 141
FPFT P++AP NLF++
Sbjct: 618 TFPFTII-PEEAPKNLFNV 635
Score = 97 bits (239), Expect = 3e-018
Identities = 54/101 (53%), Positives = 65/101 (64%), Gaps = 11/101 (10%)
Frame = -2
Query: 437 EVNNETEFPQKGR------RSPLSLINNTGFRICRPVASFSWPNLPALAAATDTDEIASL 276
++ + +KGR RSPLSLI+NTGFRICRPV F+WP LPALAAATDT +
Sbjct: 536 QITESPQNREKGRKHDQQERSPLSLISNTGFRICRPVGMFAWPQLPALAAATDT----NA 591
Query: 275 PSPNRPSRSSTTCPVKPFAAKRPLFLPFPFTATPPDQAPLN 153
SP+ + PVKP AAKRPL L FPFT P++AP N
Sbjct: 592 SSPSHRQAYPSPFPVKPLAAKRPLGLTFPFTII-PEEAPKN 631
>gi|30696040|ref|NP_568757.2| protein SWITCH1 (protein DYAD) [Arabidopsis
thaliana]
Length = 639
Score = 221 bits (561), Expect = 1e-055
Identities = 127/199 (63%), Positives = 143/199 (71%), Gaps = 24/199 (12%)
Frame = -2
Query: 689 NSCVTTQNVDQDNMMPLAKEIYADLLKKKYKIEDQLVIIAETLHKMEEDMGWLQKTVDGN 510
NSCVT+QN DN+M AKEIYADLLKKKYKIEDQLVII ETL KMEEDMGWL+KTVD N
Sbjct: 449 NSCVTSQN---DNLMTPAKEIYADLLKKKYKIEDQLVIIGETLRKMEEDMGWLKKTVDEN 505
Query: 509 CPRKPDSIETPLLLEDSPMMKTPE-------EVNNETEFPQ---KGR------RSPLSLI 378
P+KPDS ETPLLLEDSP ++T E + N TE PQ KGR RSPLSLI
Sbjct: 506 YPKKPDSTETPLLLEDSPPIQTLEGEVKVVNKGNQITESPQNREKGRKHDQQERSPLSLI 565
Query: 377 NNTGFRICRPVASFSWPNLPALAAATDTDEIASLPSPNRPSRSSTTCPVKPFAAKRPLFL 198
+NTGFRICRPV F+WP LPALAAATDT + SP+ + PVKP AAKRPL L
Sbjct: 566 SNTGFRICRPVGMFAWPQLPALAAATDT----NASSPSHRQAYPSPFPVKPLAAKRPLGL 621
Query: 197 PFPFTATPPDQAPLNLFSL 141
FPFT P++AP NLF++
Sbjct: 622 TFPFTII-PEEAPKNLFNV 639
Score = 97 bits (239), Expect = 3e-018
Identities = 54/101 (53%), Positives = 65/101 (64%), Gaps = 11/101 (10%)
Frame = -2
Query: 437 EVNNETEFPQKGR------RSPLSLINNTGFRICRPVASFSWPNLPALAAATDTDEIASL 276
++ + +KGR RSPLSLI+NTGFRICRPV F+WP LPALAAATDT +
Sbjct: 540 QITESPQNREKGRKHDQQERSPLSLISNTGFRICRPVGMFAWPQLPALAAATDT----NA 595
Query: 275 PSPNRPSRSSTTCPVKPFAAKRPLFLPFPFTATPPDQAPLN 153
SP+ + PVKP AAKRPL L FPFT P++AP N
Sbjct: 596 SSPSHRQAYPSPFPVKPLAAKRPLGLTFPFTII-PEEAPKN 635
>gi|16033414|gb|AAL13233.1| SWITCH1 splice variant S [Arabidopsis thaliana]
Length = 578
Score = 221 bits (561), Expect = 1e-055
Identities = 127/199 (63%), Positives = 143/199 (71%), Gaps = 24/199 (12%)
Frame = -2
Query: 689 NSCVTTQNVDQDNMMPLAKEIYADLLKKKYKIEDQLVIIAETLHKMEEDMGWLQKTVDGN 510
NSCVT+QN DN+M AKEIYADLLKKKYKIEDQLVII ETL KMEEDMGWL+KTVD N
Sbjct: 388 NSCVTSQN---DNLMTPAKEIYADLLKKKYKIEDQLVIIGETLRKMEEDMGWLKKTVDEN 444
Query: 509 CPRKPDSIETPLLLEDSPMMKTPE-------EVNNETEFPQ---KGR------RSPLSLI 378
P+KPDS ETPLLLEDSP ++T E + N TE PQ KGR RSPLSLI
Sbjct: 445 YPKKPDSTETPLLLEDSPPIQTLEGEVKVVNKGNQITESPQNREKGRKHDQQERSPLSLI 504
Query: 377 NNTGFRICRPVASFSWPNLPALAAATDTDEIASLPSPNRPSRSSTTCPVKPFAAKRPLFL 198
+NTGFRICRPV F+WP LPALAAATDT + SP+ + PVKP AAKRPL L
Sbjct: 505 SNTGFRICRPVGMFAWPQLPALAAATDT----NASSPSHRQAYPSPFPVKPLAAKRPLGL 560
Query: 197 PFPFTATPPDQAPLNLFSL 141
FPFT P++AP NLF++
Sbjct: 561 TFPFTII-PEEAPKNLFNV 578
Score = 97 bits (239), Expect = 3e-018
Identities = 54/101 (53%), Positives = 65/101 (64%), Gaps = 11/101 (10%)
Frame = -2
Query: 437 EVNNETEFPQKGR------RSPLSLINNTGFRICRPVASFSWPNLPALAAATDTDEIASL 276
++ + +KGR RSPLSLI+NTGFRICRPV F+WP LPALAAATDT +
Sbjct: 479 QITESPQNREKGRKHDQQERSPLSLISNTGFRICRPVGMFAWPQLPALAAATDT----NA 534
Query: 275 PSPNRPSRSSTTCPVKPFAAKRPLFLPFPFTATPPDQAPLN 153
SP+ + PVKP AAKRPL L FPFT P++AP N
Sbjct: 535 SSPSHRQAYPSPFPVKPLAAKRPLGLTFPFTII-PEEAPKN 574
>gi|297795939|ref|XP_002865854.1| hypothetical protein ARALYDRAFT_495204
[Arabidopsis lyrata subsp. lyrata]
Length = 587
Score = 213 bits (542), Expect = 2e-053
Identities = 125/199 (62%), Positives = 141/199 (70%), Gaps = 24/199 (12%)
Frame = -2
Query: 689 NSCVTTQNVDQDNMMPLAKEIYADLLKKKYKIEDQLVIIAETLHKMEEDMGWLQKTVDGN 510
NSCVT+QN DN+M AKEIYADLLKKKYKIEDQLVII ETL MEE MG+L+KTVD N
Sbjct: 397 NSCVTSQN---DNLMTPAKEIYADLLKKKYKIEDQLVIIGETLRDMEEGMGYLKKTVDEN 453
Query: 509 CPRKPDSIETPLLLEDSPMMKTPE-------EVNNETEFPQ---KGR------RSPLSLI 378
PRKPDS ETPLLLEDSP ++T E + N TE PQ KG+ RSPLSLI
Sbjct: 454 YPRKPDSTETPLLLEDSPPIQTLEGEVKVVNKGNQITESPQNREKGKKHDQQERSPLSLI 513
Query: 377 NNTGFRICRPVASFSWPNLPALAAATDTDEIASLPSPNRPSRSSTTCPVKPFAAKRPLFL 198
+NTGFRICRPV F+WP L ALAAATDT+ + P PS CPVKP AAKRPL L
Sbjct: 514 SNTGFRICRPVGIFAWPKLSALAAATDTNASSLSHRPAYPS----PCPVKPLAAKRPLGL 569
Query: 197 PFPFTATPPDQAPLNLFSL 141
FPFT P++AP NLF++
Sbjct: 570 TFPFTII-PEEAPTNLFNV 587
Score = 97 bits (241), Expect = 2e-018
Identities = 55/111 (49%), Positives = 71/111 (63%), Gaps = 6/111 (5%)
Frame = -2
Query: 485 ETPLLLEDSPMMKTPEEVNNETEFPQKGRRSPLSLINNTGFRICRPVASFSWPNLPALAA 306
E ++ + + + ++P+ + Q+ RSPLSLI+NTGFRICRPV F+WP L ALAA
Sbjct: 479 EVKVVNKGNQITESPQNREKGKKHDQQ-ERSPLSLISNTGFRICRPVGIFAWPKLSALAA 537
Query: 305 ATDTDEIASLPSPNRPSRSSTTCPVKPFAAKRPLFLPFPFTATPPDQAPLN 153
ATDT+ + P PS CPVKP AAKRPL L FPFT P++AP N
Sbjct: 538 ATDTNASSLSHRPAYPS----PCPVKPLAAKRPLGLTFPFTII-PEEAPTN 583
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,850,776,162,430
Number of Sequences: 15229318
Number of Extensions: 5850776162430
Number of Successful Extensions: 1375091103
Number of sequences better than 0.0: 0
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