BLASTX 7.6.2
Query= UN55584 /QuerySize=597
(596 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297848636|ref|XP_002892199.1| transducin family protein [Arab... 85 5e-015
gi|30678798|ref|NP_849587.1| transducin/WD-40 repeat-containing ... 80 2e-013
gi|18379250|ref|NP_563703.1| transducin/WD-40 repeat-containing ... 80 2e-013
gi|3142301|gb|AAC16752.1| Contains similarity to neural cell adh... 74 9e-012
gi|297795021|ref|XP_002865395.1| transducin family protein [Arab... 69 5e-010
gi|15240053|ref|NP_199206.1| transducin/WD40 domain-containing p... 68 6e-010
gi|334188184|ref|NP_001190467.1| transducin/WD40 domain-containi... 68 6e-010
>gi|297848636|ref|XP_002892199.1| transducin family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 789
Score = 85 bits (209), Expect = 5e-015
Identities = 44/57 (77%), Positives = 47/57 (82%), Gaps = 3/57 (5%)
Frame = -2
Query: 316 REISPKTKSVPQKRWGVSRRCVTAADSPCGTSREPVSEQRHNLISWVEAESLQHLSA 146
REISPKTK VP+KRWG SR ADS CGT+ EPVSEQ HNLISWVEAESLQ+LSA
Sbjct: 42 REISPKTKFVPRKRWGESR---WDADSSCGTTSEPVSEQGHNLISWVEAESLQYLSA 95
>gi|30678798|ref|NP_849587.1| transducin/WD-40 repeat-containing protein
[Arabidopsis thaliana]
Length = 793
Score = 80 bits (195), Expect = 2e-013
Identities = 42/57 (73%), Positives = 44/57 (77%), Gaps = 3/57 (5%)
Frame = -2
Query: 316 REISPKTKSVPQKRWGVSRRCVTAADSPCGTSREPVSEQRHNLISWVEAESLQHLSA 146
REISP TK VP+KRWG SR ADS CGT+ EPV EQ NLISWVEAESLQHLSA
Sbjct: 41 REISPNTKFVPRKRWGESR---CDADSSCGTTSEPVREQGLNLISWVEAESLQHLSA 94
>gi|18379250|ref|NP_563703.1| transducin/WD-40 repeat-containing protein
[Arabidopsis thaliana]
Length = 790
Score = 80 bits (195), Expect = 2e-013
Identities = 42/57 (73%), Positives = 44/57 (77%), Gaps = 3/57 (5%)
Frame = -2
Query: 316 REISPKTKSVPQKRWGVSRRCVTAADSPCGTSREPVSEQRHNLISWVEAESLQHLSA 146
REISP TK VP+KRWG SR ADS CGT+ EPV EQ NLISWVEAESLQHLSA
Sbjct: 41 REISPNTKFVPRKRWGESR---CDADSSCGTTSEPVREQGLNLISWVEAESLQHLSA 94
>gi|3142301|gb|AAC16752.1| Contains similarity to neural cell adhesion molecule
2, large isoform precursor gb|M76710 from Xenopus laevis, and beta
transducin from S. cerevisiae gb|Q05946. ESTs gb|N65081 gb|Z30910,
gb|Z34190, gb|Z34611, gb|R30101, gb|H36304, and gb|N65606 come from
this gene [Arabidopsis thaliana]
Length = 838
Score = 74 bits (181), Expect = 9e-012
Identities = 42/60 (70%), Positives = 44/60 (73%), Gaps = 6/60 (10%)
Frame = -2
Query: 316 REISPKTKSVPQKRWGVSRRCVTAADSPCGTSREPVSEQRHNLISW---VEAESLQHLSA 146
REISP TK VP+KRWG SR ADS CGT+ EPV EQ NLISW VEAESLQHLSA
Sbjct: 41 REISPNTKFVPRKRWGESR---CDADSSCGTTSEPVREQGLNLISWYLSVEAESLQHLSA 97
>gi|297795021|ref|XP_002865395.1| transducin family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 726
Score = 69 bits (166), Expect = 5e-010
Identities = 35/57 (61%), Positives = 40/57 (70%), Gaps = 3/57 (5%)
Frame = -2
Query: 316 REISPKTKSVPQKRWGVSRRCVTAADSPCGTSREPVSEQRHNLISWVEAESLQHLSA 146
RE+SP K VP+KRWG SR DS CGT+ EP+ E +L SWVEAESLQHLSA
Sbjct: 44 REMSPNAKFVPRKRWGKSR---WYTDSSCGTNSEPLREAGQSLTSWVEAESLQHLSA 97
>gi|15240053|ref|NP_199206.1| transducin/WD40 domain-containing protein
[Arabidopsis thaliana]
Length = 726
Score = 68 bits (165), Expect = 6e-010
Identities = 35/57 (61%), Positives = 40/57 (70%), Gaps = 3/57 (5%)
Frame = -2
Query: 316 REISPKTKSVPQKRWGVSRRCVTAADSPCGTSREPVSEQRHNLISWVEAESLQHLSA 146
RE+SPK K VP+KRWG SR DS CGT+ E + E +L SWVEAESLQHLSA
Sbjct: 44 REMSPKAKFVPRKRWGKSR---WYTDSSCGTNNESMKETGQSLTSWVEAESLQHLSA 97
>gi|334188184|ref|NP_001190467.1| transducin/WD40 domain-containing protein
[Arabidopsis thaliana]
Length = 752
Score = 68 bits (165), Expect = 6e-010
Identities = 35/57 (61%), Positives = 40/57 (70%), Gaps = 3/57 (5%)
Frame = -2
Query: 316 REISPKTKSVPQKRWGVSRRCVTAADSPCGTSREPVSEQRHNLISWVEAESLQHLSA 146
RE+SPK K VP+KRWG SR DS CGT+ E + E +L SWVEAESLQHLSA
Sbjct: 44 REMSPKAKFVPRKRWGKSR---WYTDSSCGTNNESMKETGQSLTSWVEAESLQHLSA 97
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,850,776,162,430
Number of Sequences: 15229318
Number of Extensions: 5850776162430
Number of Successful Extensions: 1375091103
Number of sequences better than 0.0: 0
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