BLASTX 7.6.2
Query= UN55759 /QuerySize=799
(798 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|O94432|YHKF_SCHPO Uncharacterized RNA-binding protein C660.15... 106 2e-022
sp|Q96DH6|MSI2H_HUMAN RNA-binding protein Musashi homolog 2 OS=H... 101 6e-021
sp|Q920Q6|MSI2H_MOUSE RNA-binding protein Musashi homolog 2 OS=M... 101 6e-021
sp|Q99729|ROAA_HUMAN Heterogeneous nuclear ribonucleoprotein A/B... 98 7e-020
sp|Q99383|HRP1_YEAST Nuclear polyadenylated RNA-binding protein ... 97 9e-020
sp|Q99020|ROAA_MOUSE Heterogeneous nuclear ribonucleoprotein A/B... 97 1e-019
sp|Q9VVE5|MSIR6_DROME RNA-binding protein Musashi homolog Rbp6 O... 96 2e-019
sp|Q5ZI72|HNRDL_CHICK Heterogeneous nuclear ribonucleoprotein D-... 94 1e-018
sp|O14979|HNRDL_HUMAN Heterogeneous nuclear ribonucleoprotein D-... 92 3e-018
sp|Q9Z130|HNRDL_MOUSE Heterogeneous nuclear ribonucleoprotein D-... 92 3e-018
sp|Q640A2|HNRDL_XENTR Heterogeneous nuclear ribonucleoprotein D-... 92 3e-018
sp|Q7ZX83|HNDLA_XENLA Heterogeneous nuclear ribonucleoprotein D-... 92 5e-018
sp|Q96EP5|DAZP1_HUMAN DAZ-associated protein 1 OS=Homo sapiens G... 91 6e-018
sp|Q9JII5|DAZP1_MOUSE DAZ-associated protein 1 OS=Mus musculus G... 91 6e-018
sp|Q98SJ2|DAZP1_XENLA DAZ-associated protein 1 OS=Xenopus laevis... 91 8e-018
sp|P48809|RB27C_DROME Heterogeneous nuclear ribonucleoprotein 27... 90 2e-017
sp|Q9DED4|CIRBB_XENLA Cold-inducible RNA-binding protein B OS=Xe... 85 4e-016
sp|P60826|CIRBP_CRIGR Cold-inducible RNA-binding protein OS=Cric... 85 4e-016
sp|P60824|CIRBP_MOUSE Cold-inducible RNA-binding protein OS=Mus ... 85 4e-016
sp|P60825|CIRBP_RAT Cold-inducible RNA-binding protein OS=Rattus... 85 4e-016
>sp|O94432|YHKF_SCHPO Uncharacterized RNA-binding protein C660.15
OS=Schizosaccharomyces pombe GN=SPBC660.15 PE=2 SV=1
Length = 474
Score = 106 bits (263), Expect = 2e-022
Identities = 38/96 (39%), Positives = 71/96 (73%)
Frame = +3
Query: 369 DNGKLFIGGISWDTNEERLKEYFSTFGEVIEAVILKDRTTGRARGFGFVVFADPAVAEFV 548
++GK+FIGG++W+T ++ L++YF FGEV++ +++D TTGR+RGFGF+ F +P V
Sbjct: 161 EDGKMFIGGLNWETTDDSLRDYFEQFGEVLDCTVMRDSTTGRSRGFGFLTFKNPKCVNEV 220
Query: 549 ITEKHHIDGRLVEAKKAVPRDDQNMVTRSNSSSIQG 656
++++HH+DG++++ K+A+PR++Q + + G
Sbjct: 221 MSKEHHLDGKIIDPKRAIPREEQEKTAKMFVGGVPG 256
>sp|Q96DH6|MSI2H_HUMAN RNA-binding protein Musashi homolog 2 OS=Homo sapiens
GN=MSI2 PE=1 SV=1
Length = 328
Score = 101 bits (251), Expect = 6e-021
Identities = 49/106 (46%), Positives = 71/106 (66%), Gaps = 2/106 (1%)
Frame = +3
Query: 345 GAKRKMQSDNGKLFIGGISWDTNEERLKEYFSTFGEVIEAVILKDRTTGRARGFGFVVFA 524
G+ Q D GK+FIGG+SW T+ + L++YFS FGE+ E ++++D TT R+RGFGFV FA
Sbjct: 11 GSANDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFA 70
Query: 525 DPAVAEFVITEKHH-IDGRLVEAKKAVPRDDQ-NMVTRSNSSSIQG 656
DPA + V+ + HH +D + ++ K A PR Q MVTR+ + G
Sbjct: 71 DPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGG 116
>sp|Q920Q6|MSI2H_MOUSE RNA-binding protein Musashi homolog 2 OS=Mus musculus
GN=Msi2 PE=1 SV=1
Length = 346
Score = 101 bits (251), Expect = 6e-021
Identities = 49/106 (46%), Positives = 71/106 (66%), Gaps = 2/106 (1%)
Frame = +3
Query: 345 GAKRKMQSDNGKLFIGGISWDTNEERLKEYFSTFGEVIEAVILKDRTTGRARGFGFVVFA 524
G+ Q D GK+FIGG+SW T+ + L++YFS FGE+ E ++++D TT R+RGFGFV FA
Sbjct: 11 GSANDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFA 70
Query: 525 DPAVAEFVITEKHH-IDGRLVEAKKAVPRDDQ-NMVTRSNSSSIQG 656
DPA + V+ + HH +D + ++ K A PR Q MVTR+ + G
Sbjct: 71 DPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGG 116
>sp|Q99729|ROAA_HUMAN Heterogeneous nuclear ribonucleoprotein A/B OS=Homo
sapiens GN=HNRNPAB PE=1 SV=2
Length = 332
Score = 98 bits (242), Expect = 7e-020
Identities = 46/103 (44%), Positives = 71/103 (68%), Gaps = 5/103 (4%)
Frame = +3
Query: 297 PSPRRDSASGFSLSD*GAKRKMQSDNGKLFIGGISWDTNEERLKEYFSTFGEVIEAVILK 476
PS ++ A G ++ K + D GK+F+GG+SWDT+++ LK+YF+ FGEV++ I
Sbjct: 47 PSGNQNGAEGDQIN----ASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKM 102
Query: 477 DRTTGRARGFGFVVFADPAVAEFVITEK-HHIDGRLVEAKKAV 602
D TGR+RGFGF++F D A E V+ +K H +DGR+++ KKA+
Sbjct: 103 DPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDGRVIDPKKAM 145
>sp|Q99383|HRP1_YEAST Nuclear polyadenylated RNA-binding protein 4
OS=Saccharomyces cerevisiae GN=HRP1 PE=1 SV=1
Length = 534
Score = 97 bits (241), Expect = 9e-020
Identities = 39/91 (42%), Positives = 66/91 (72%)
Frame = +3
Query: 348 AKRKMQSDNGKLFIGGISWDTNEERLKEYFSTFGEVIEAVILKDRTTGRARGFGFVVFAD 527
+K + ++ K+FIGG++WDT E+ L+EYF +G V + I+KD TGR+RGFGF+ F
Sbjct: 150 SKADLSKESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEK 209
Query: 528 PAVAEFVITEKHHIDGRLVEAKKAVPRDDQN 620
P+ + V+ +H +DG++++ K+A+PRD+Q+
Sbjct: 210 PSSVDEVVKTQHILDGKVIDPKRAIPRDEQD 240
>sp|Q99020|ROAA_MOUSE Heterogeneous nuclear ribonucleoprotein A/B OS=Mus
musculus GN=Hnrnpab PE=1 SV=1
Length = 285
Score = 97 bits (239), Expect = 1e-019
Identities = 45/103 (43%), Positives = 71/103 (68%), Gaps = 5/103 (4%)
Frame = +3
Query: 297 PSPRRDSASGFSLSD*GAKRKMQSDNGKLFIGGISWDTNEERLKEYFSTFGEVIEAVILK 476
PS ++ A G ++ K + D GK+F+GG+SWDT+++ LK+YF+ FGEV++ I
Sbjct: 53 PSGNQNGAEGDQIN----ASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKM 108
Query: 477 DRTTGRARGFGFVVFADPAVAEFVITEK-HHIDGRLVEAKKAV 602
D TGR+RGFGF++F D + E V+ +K H +DGR+++ KKA+
Sbjct: 109 DPNTGRSRGFGFILFKDSSSVEKVLDQKEHRLDGRVIDPKKAM 151
>sp|Q9VVE5|MSIR6_DROME RNA-binding protein Musashi homolog Rbp6 OS=Drosophila
melanogaster GN=Rbp6 PE=1 SV=3
Length = 369
Score = 96 bits (237), Expect = 2e-019
Identities = 46/102 (45%), Positives = 70/102 (68%), Gaps = 2/102 (1%)
Frame = +3
Query: 357 KMQSDNGKLFIGGISWDTNEERLKEYFSTFGEVIEAVILKDRTTGRARGFGFVVFADPAV 536
++ +D GK+FIGG+SW T+ E L++YF +G++ EA+++KD TT R+RGFGFV F+DP
Sbjct: 23 EVPNDPGKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNS 82
Query: 537 AEFVITE-KHHIDGRLVEAKKAVP-RDDQNMVTRSNSSSIQG 656
+ V+T+ H +DG+ V+ K A P R MVTR+ + G
Sbjct: 83 VDKVLTQGTHELDGKKVDPKVAFPRRAHPKMVTRTKKIFVGG 124
>sp|Q5ZI72|HNRDL_CHICK Heterogeneous nuclear ribonucleoprotein D-like OS=Gallus
gallus GN=HNRPDL PE=2 SV=1
Length = 301
Score = 94 bits (231), Expect = 1e-018
Identities = 44/82 (53%), Positives = 60/82 (73%), Gaps = 1/82 (1%)
Frame = +3
Query: 357 KMQSDNGKLFIGGISWDTNEERLKEYFSTFGEVIEAVILKDRTTGRARGFGFVVFADPAV 536
K Q D+GK+FIGG+SWDT+++ L EY S FGEV++ I D TGR+RGFGFV+F D A
Sbjct: 24 KNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAAS 83
Query: 537 AEFVITEKHH-IDGRLVEAKKA 599
E V+ K H +DG+L++ K+A
Sbjct: 84 VEKVLELKEHKLDGKLIDPKRA 105
>sp|O14979|HNRDL_HUMAN Heterogeneous nuclear ribonucleoprotein D-like OS=Homo
sapiens GN=HNRPDL PE=1 SV=3
Length = 420
Score = 92 bits (228), Expect = 3e-018
Identities = 43/82 (52%), Positives = 60/82 (73%), Gaps = 1/82 (1%)
Frame = +3
Query: 357 KMQSDNGKLFIGGISWDTNEERLKEYFSTFGEVIEAVILKDRTTGRARGFGFVVFADPAV 536
K Q D+GK+FIGG+SWDT+++ L EY S FGEV++ I D TGR+RGFGFV+F D A
Sbjct: 142 KNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAAS 201
Query: 537 AEFVITEKHH-IDGRLVEAKKA 599
+ V+ K H +DG+L++ K+A
Sbjct: 202 VDKVLELKEHKLDGKLIDPKRA 223
>sp|Q9Z130|HNRDL_MOUSE Heterogeneous nuclear ribonucleoprotein D-like OS=Mus
musculus GN=Hnrpdl PE=1 SV=1
Length = 301
Score = 92 bits (228), Expect = 3e-018
Identities = 43/82 (52%), Positives = 60/82 (73%), Gaps = 1/82 (1%)
Frame = +3
Query: 357 KMQSDNGKLFIGGISWDTNEERLKEYFSTFGEVIEAVILKDRTTGRARGFGFVVFADPAV 536
K Q D+GK+FIGG+SWDT+++ L EY S FGEV++ I D TGR+RGFGFV+F D A
Sbjct: 23 KNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAAS 82
Query: 537 AEFVITEKHH-IDGRLVEAKKA 599
+ V+ K H +DG+L++ K+A
Sbjct: 83 VDKVLELKEHKLDGKLIDPKRA 104
>sp|Q640A2|HNRDL_XENTR Heterogeneous nuclear ribonucleoprotein D-like OS=Xenopus
tropicalis GN=hnrpdl PE=2 SV=1
Length = 297
Score = 92 bits (228), Expect = 3e-018
Identities = 42/82 (51%), Positives = 60/82 (73%), Gaps = 1/82 (1%)
Frame = +3
Query: 357 KMQSDNGKLFIGGISWDTNEERLKEYFSTFGEVIEAVILKDRTTGRARGFGFVVFADPAV 536
K Q D GK+FIGG+SWDT+++ L EY S FGEV++ I D TGR+RGFGFV+F D
Sbjct: 20 KNQQDEGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAVS 79
Query: 537 AEFVI-TEKHHIDGRLVEAKKA 599
+ V+ T++H +DG+L++ K+A
Sbjct: 80 VDKVLETKEHKLDGKLIDPKRA 101
>sp|Q7ZX83|HNDLA_XENLA Heterogeneous nuclear ribonucleoprotein D-like-A
OS=Xenopus laevis GN=hnrpdl-a PE=2 SV=1
Length = 293
Score = 92 bits (226), Expect = 5e-018
Identities = 42/82 (51%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
Frame = +3
Query: 357 KMQSDNGKLFIGGISWDTNEERLKEYFSTFGEVIEAVILKDRTTGRARGFGFVVFADPAV 536
K Q D GK+FIGG+SWDT+++ L EY S FGEV++ I D TGR+RGFGFV+F D
Sbjct: 20 KNQQDEGKMFIGGLSWDTSKKDLTEYLSRFGEVLDCTIKTDPVTGRSRGFGFVLFKDAVS 79
Query: 537 AEFVI-TEKHHIDGRLVEAKKA 599
+ V+ T +H +DG+L++ K+A
Sbjct: 80 VDKVLETNEHKLDGKLIDPKRA 101
>sp|Q96EP5|DAZP1_HUMAN DAZ-associated protein 1 OS=Homo sapiens GN=DAZAP1 PE=1
SV=1
Length = 407
Score = 91 bits (225), Expect = 6e-018
Identities = 42/87 (48%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
Frame = +3
Query: 375 GKLFIGGISWDTNEERLKEYFSTFGEVIEAVILKDRTTGRARGFGFVVFADP-AVAEFVI 551
GKLF+GG+ W T +E L+ YFS +GEV++ VI+KD+TT ++RGFGFV F DP V +
Sbjct: 10 GKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 69
Query: 552 TEKHHIDGRLVEAKKAVPRDDQNMVTR 632
+ H +DGR ++ K PR Q TR
Sbjct: 70 SRPHTLDGRNIDPKPCTPRGMQPERTR 96
>sp|Q9JII5|DAZP1_MOUSE DAZ-associated protein 1 OS=Mus musculus GN=Dazap1 PE=2
SV=2
Length = 406
Score = 91 bits (225), Expect = 6e-018
Identities = 42/87 (48%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
Frame = +3
Query: 375 GKLFIGGISWDTNEERLKEYFSTFGEVIEAVILKDRTTGRARGFGFVVFADP-AVAEFVI 551
GKLF+GG+ W T +E L+ YFS +GEV++ VI+KD+TT ++RGFGFV F DP V +
Sbjct: 10 GKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 69
Query: 552 TEKHHIDGRLVEAKKAVPRDDQNMVTR 632
+ H +DGR ++ K PR Q TR
Sbjct: 70 SRPHTLDGRNIDPKPCTPRGMQPERTR 96
>sp|Q98SJ2|DAZP1_XENLA DAZ-associated protein 1 OS=Xenopus laevis GN=dazap1 PE=1
SV=1
Length = 360
Score = 91 bits (224), Expect = 8e-018
Identities = 43/97 (44%), Positives = 60/97 (61%), Gaps = 1/97 (1%)
Frame = +3
Query: 375 GKLFIGGISWDTNEERLKEYFSTFGEVIEAVILKDRTTGRARGFGFVVFADP-AVAEFVI 551
GKLF+GG+ W T +E L+ YFS +GEV++ VI+KD+TT ++RGFGFV F DP V +
Sbjct: 10 GKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 69
Query: 552 TEKHHIDGRLVEAKKAVPRDDQNMVTRSNSSSIQGSP 662
+ H +DGR ++ K PR Q +R Q P
Sbjct: 70 SRPHTLDGRNIDPKPCTPRGMQPERSRPREGWQQKEP 106
>sp|P48809|RB27C_DROME Heterogeneous nuclear ribonucleoprotein 27C OS=Drosophila
melanogaster GN=Hrb27C PE=1 SV=2
Length = 421
Score = 90 bits (221), Expect = 2e-017
Identities = 38/83 (45%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
Frame = +3
Query: 363 QSDNGKLFIGGISWDTNEERLKEYFSTFGEVIEAVILKDRTTGRARGFGFVVFADPAVAE 542
+ + GKLF+GG+SW+T +E L YF FG++I+ V++K+ +GR+RGFGFV FADP
Sbjct: 3 EDERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVN 62
Query: 543 FVITE-KHHIDGRLVEAKKAVPR 608
V+ H +DGR ++ K PR
Sbjct: 63 HVLQNGPHTLDGRTIDPKPCNPR 85
>sp|Q9DED4|CIRBB_XENLA Cold-inducible RNA-binding protein B OS=Xenopus laevis
GN=cirbp-b PE=1 SV=1
Length = 166
Score = 85 bits (209), Expect = 4e-016
Identities = 48/110 (43%), Positives = 67/110 (60%), Gaps = 3/110 (2%)
Frame = +3
Query: 366 SDNGKLFIGGISWDTNEERLKEYFSTFGEVIEAVILKDRTTGRARGFGFVVFADPAVAE- 542
SD GKLFIGG+++DTNEE L++ FS +G++ E V++KDR T R+RGFGFV F +P A+
Sbjct: 2 SDEGKLFIGGLNFDTNEESLEQVFSKYGQISEVVVVKDRETKRSRGFGFVTFENPDDAKD 61
Query: 543 -FVITEKHHIDGRLVEAKKA-VPRDDQNMVTRSNSSSIQGSPGGGGGGGG 686
+ +DGR + +A D+ R SS +G GG G GG
Sbjct: 62 AMMAMNGKAVDGRQIRVDQAGKSSGDRRGGYRGGSSGGRGFFRGGRGRGG 111
>sp|P60826|CIRBP_CRIGR Cold-inducible RNA-binding protein OS=Cricetulus griseus
GN=CIRBP PE=2 SV=1
Length = 172
Score = 85 bits (209), Expect = 4e-016
Identities = 49/124 (39%), Positives = 68/124 (54%), Gaps = 8/124 (6%)
Frame = +3
Query: 360 MQSDNGKLFIGGISWDTNEERLKEYFSTFGEVIEAVILKDRTTGRARGFGFVVF--ADPA 533
M SD GKLF+GG+S+DTNE+ L++ FS +G++ E V++KDR T R+RGFGFV F D A
Sbjct: 1 MASDEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDA 60
Query: 534 VAEFVITEKHHIDGRLVEAKKAVPRDDQNMVTRSNSSSIQGSPGGGGGGGGPGVVRTRRY 713
+ +DGR + +A D + S +G GG G G R R +
Sbjct: 61 KDAMMAMNGKSVDGRQIRVDQAGKSSD------NRSRGYRGGSAGGRGFFRGGRSRGRGF 114
Query: 714 SSEG 725
S G
Sbjct: 115 SRGG 118
>sp|P60824|CIRBP_MOUSE Cold-inducible RNA-binding protein OS=Mus musculus
GN=Cirbp PE=1 SV=1
Length = 172
Score = 85 bits (209), Expect = 4e-016
Identities = 49/124 (39%), Positives = 68/124 (54%), Gaps = 8/124 (6%)
Frame = +3
Query: 360 MQSDNGKLFIGGISWDTNEERLKEYFSTFGEVIEAVILKDRTTGRARGFGFVVF--ADPA 533
M SD GKLF+GG+S+DTNE+ L++ FS +G++ E V++KDR T R+RGFGFV F D A
Sbjct: 1 MASDEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDA 60
Query: 534 VAEFVITEKHHIDGRLVEAKKAVPRDDQNMVTRSNSSSIQGSPGGGGGGGGPGVVRTRRY 713
+ +DGR + +A D + S +G GG G G R R +
Sbjct: 61 KDAMMAMNGKSVDGRQIRVDQAGKSSD------NRSRGYRGGSAGGRGFFRGGRSRGRGF 114
Query: 714 SSEG 725
S G
Sbjct: 115 SRGG 118
>sp|P60825|CIRBP_RAT Cold-inducible RNA-binding protein OS=Rattus norvegicus
GN=Cirbp PE=2 SV=1
Length = 172
Score = 85 bits (209), Expect = 4e-016
Identities = 49/124 (39%), Positives = 68/124 (54%), Gaps = 8/124 (6%)
Frame = +3
Query: 360 MQSDNGKLFIGGISWDTNEERLKEYFSTFGEVIEAVILKDRTTGRARGFGFVVF--ADPA 533
M SD GKLF+GG+S+DTNE+ L++ FS +G++ E V++KDR T R+RGFGFV F D A
Sbjct: 1 MASDEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDA 60
Query: 534 VAEFVITEKHHIDGRLVEAKKAVPRDDQNMVTRSNSSSIQGSPGGGGGGGGPGVVRTRRY 713
+ +DGR + +A D + S +G GG G G R R +
Sbjct: 61 KDAMMAMNGKSVDGRQIRVDQAGKSSD------NRSRGYRGGSAGGRGFFRGGRSRGRGF 114
Query: 714 SSEG 725
S G
Sbjct: 115 SRGG 118
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 203,055,350,260
Number of Sequences: 518415
Number of Extensions: 203055350260
Number of Successful Extensions: 1243317088
Number of sequences better than 0.0: 0
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